Basic Information

Insect: Adalia decempunctata
Gene Symbol: -
Assembly: GCA_951802165.1
Location: OX637699.1:28283507-28285601[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.092 12 7.8 0.1 2 20 148 166 147 168 0.89

2 12 3.7e-06 0.00049 21.6 2.6 1 23 175 197 175 197 0.96

3 12 6.3e-08 8.3e-06 27.2 2.3 1 23 203 225 203 225 0.99

4 12 0.00016 0.021 16.4 3.1 1 23 231 253 231 253 0.98

5 12 2.5e-05 0.0034 19.0 4.4 1 23 259 281 259 281 0.97

6 12 0.017 2.3 10.1 1.2 2 23 292 313 291 313 0.97

7 12 8.2e-07 0.00011 23.7 0.9 1 23 320 342 320 342 0.99

8 12 3.1e-07 4.1e-05 25.0 1.7 1 23 348 370 348 370 0.99

9 12 6.7e-06 0.00089 20.8 2.5 1 23 376 398 376 398 0.99

10 12 0.00023 0.03 16.0 1.2 1 23 404 426 404 426 0.98

11 12 2.4e-06 0.00032 22.2 1.8 1 23 432 454 432 454 0.98

12 12 1.4e-05 0.0019 19.8 1.4 3 23 462 483 460 483 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.092	12	7.8	0.1	2	20	148	166	147	168	0.89
2	12	3.7e-06	0.00049	21.6	2.6	1	23	175	197	175	197	0.96
3	12	6.3e-08	8.3e-06	27.2	2.3	1	23	203	225	203	225	0.99
4	12	0.00016	0.021	16.4	3.1	1	23	231	253	231	253	0.98
5	12	2.5e-05	0.0034	19.0	4.4	1	23	259	281	259	281	0.97
6	12	0.017	2.3	10.1	1.2	2	23	292	313	291	313	0.97
7	12	8.2e-07	0.00011	23.7	0.9	1	23	320	342	320	342	0.99
8	12	3.1e-07	4.1e-05	25.0	1.7	1	23	348	370	348	370	0.99
9	12	6.7e-06	0.00089	20.8	2.5	1	23	376	398	376	398	0.99
10	12	0.00023	0.03	16.0	1.2	1	23	404	426	404	426	0.98
11	12	2.4e-06	0.00032	22.2	1.8	1	23	432	454	432	454	0.98
12	12	1.4e-05	0.0019	19.8	1.4	3	23	462	483	460	483	0.97

Sequence Information

Coding Sequence: ATGGACGGACTAAAAGTTGACTCAGACTGCACAGTAAAAGTGAAGAATGAGCCACCAGAAGACTCAGACGTTGAGGTTTCTGAAAGCAAGCTTTGCTTCGATCTTCCTATTCCTTTCAAAGAAGAACCCGATGTGATACACGATGGATCAACTGAAAATTTCTTGAATGACGTTTGTGCTGCTGTTAATGCAAATATTGCTGAAATTAGTACAGATTTAATTGAAGCCAATGAAAAGCAATTGGATGAAGCAAAAAAACAAATGGAAGCTTTACAGAAAGCTCTTGCTACTGGAAAATTGAGAATACCAATAACAATTAATAGAAAGCCAAAGAAAGAATATTTAGACAAACCAACTACCTCTGAAGCAAAGACAGATATACTCAGAACTGCTTTGACCAAGAAAGATGATTCTGATATAGATAGTGAAGAGGATTTATTAAAGTGTATTGTGTGTAAAAGGATTTTTAATGATCAAAACTCCCTAGAGGAACATGTTAGTGGCCAATctccaaatgaaaattttgcttgttgtGCTTGCGGGAAATCTTTTAGGGACAATTCTCAGTTAAATATTCATTATCGTAAACATACAGGTGAAAAGCCTTATTCATGCAAGGATTGTAATAAACAATTCTCAATTAAAGGAAATTTAAATAAACATATGAGGACTCATACTGGAGAGAGGAGATTTGAGTGCACAATATGCAATAAGAAATTCTTTCAGTTTGCTCACTTAGATGACCATGTCAAAACTCATACAGGTGAGAGACCATATATTTGTGATGAATGCAACTGTGCTTTCAAAACTAAATCACTGCTGAagaagcataaaaaaaatcatgatgAAAACTCTGTTAGAAAAAGATGTGTACGCTGTCGTATTTGTTTTAAAGTCATGAAAACAAGTAAGCAGCTTTATGGTCATATGAAATTACATTCTGAAGATAAAGAACCGTACAAATGTGAAATATGTGGAAAagtttataaaagcttgttttATCTACAAGGACATCAAAGAATGCACGAAGGTGTTAAGCCTTATAAATGTAGTCTATGTGATAAATCTTTTGTCATGTCCAGTCAGCTGAGGAGGCATGAAAACACCCATGCAGGTTTGAAACCATTCCAATGTCACATATGCTCAAGATCATTTGGAGTTACACAGAATCTAAAGAGGCATATACTGACCCATACCGGTGATAAACCTTTCACATGTAAAATATGCAGTAAAGGTTTTCTAACGCTTGAAAATATGAATCGACATACTCGAATCCACACAGGGGAGAAACCATTCTCATGTGATGTATGTGGGAAGAGATTCGCTCATAGTACTACTGTTAAAGAGCATATAAGAACTCACACTGGTGATAAACCATTCGGATGCAGCATTTGCAATAAAAGATTTGCAGTGAATAAAATGCTTTTCAAGCATATGCGAATGAGACATCCAGAGTTCAATGGAACTTTTCAAAAGGTGCACGATATTCCAATTCAAGTGAGAATGCAAGTTGCCCATAATTTTGACCAAGATGATTATCAAGAGCCAGAATATATAAAAACTACTGATATCAATGGAGTTAAAGAAGAACAAGATGAAGAAGATAATAAACCCCTAATTTATCTAAGGTCCCATTCCAAAAAACAACCTGTACAAAGTGCAATTGATAATAATCCTATAGATTTGAAAATTGTCAAAGAAGAGGTAATAGATGAAAAACCTGTAATAGGAAATGTTGActaa
Protein Sequence: MDGLKVDSDCTVKVKNEPPEDSDVEVSESKLCFDLPIPFKEEPDVIHDGSTENFLNDVCAAVNANIAEISTDLIEANEKQLDEAKKQMEALQKALATGKLRIPITINRKPKKEYLDKPTTSEAKTDILRTALTKKDDSDIDSEEDLLKCIVCKRIFNDQNSLEEHVSGQSPNENFACCACGKSFRDNSQLNIHYRKHTGEKPYSCKDCNKQFSIKGNLNKHMRTHTGERRFECTICNKKFFQFAHLDDHVKTHTGERPYICDECNCAFKTKSLLKKHKKNHDENSVRKRCVRCRICFKVMKTSKQLYGHMKLHSEDKEPYKCEICGKVYKSLFYLQGHQRMHEGVKPYKCSLCDKSFVMSSQLRRHENTHAGLKPFQCHICSRSFGVTQNLKRHILTHTGDKPFTCKICSKGFLTLENMNRHTRIHTGEKPFSCDVCGKRFAHSTTVKEHIRTHTGDKPFGCSICNKRFAVNKMLFKHMRMRHPEFNGTFQKVHDIPIQVRMQVAHNFDQDDYQEPEYIKTTDINGVKEEQDEEDNKPLIYLRSHSKKQPVQSAIDNNPIDLKIVKEEVIDEKPVIGNVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -