Basic Information

Gene Symbol
CDC5L
Assembly
GCA_951802165.1
Location
OX637701.1:19968137-19974275[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-16 2.9e-13 50.9 1.5 2 46 9 54 8 54 0.97
2 2 2.1e-09 5e-06 27.7 0.0 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGCGTGTTATGATAAAGGGTGGAGTCTGGAGAAACACCGAAGATGAAATTCTCAAAGCAGCTGTTATGAAATATGGAAAGAATCAGTGGTCACGTATTGCCTCATTATTACATAGGAAATCAGCTAAACAGTGCAAGGCTCGTTGGTTCGAATGGCTGGATCCAAGTATTAAAAAGACCGAATGGTCAAGCGTGGAAGATGAAAAACTACTGCATTTGGCCAAAATTATGCCAACTCAATGGAGAACCCTTGCACCAATTATTGGAAGAACGGCTGCTCAATGTCTTGAAAGATATGAATATCTTCTTGATCAGGCTCAAAGAAAAGAGGAAGGTGAATATGCTAACGATGATCCGAGAAAACTCAAACCAGGAGAAATTGATCCCAATCCTGAAACAAAGCCAGCAAGACCAGACCCGAAGGATATGGATGAAGATGAGTTGGAGATGCTTTCTGAAGCTAGAGCCAGATTAGCCAATACTCAAGGTAAAAAAGCAAAGAGGAAAGCTCGTGAAAAGCAACTTGAAGAGGCCAGAAGATTGGCTGCCCTGCAGAAAAAGAGGGAACTTAGAGCTGCTGGAATTGAAGTTGCTTCAAGACCAAAAAAGAAAAAGGGCATCGATTACAACGCagaaattccatttgaaaaattgccTGCTATCGGATTTTATGACACCTCCAAAGAGACTGTTGACCCAATTGGGCCTGacttcaaaaaaattaatgataaTGATGAGAATGATAGAAGGAAAGATGTAAACGAGAAGAAACGGAAAAAAGATAGTAATGTCCCAaatgagatattcaaaaatgatGCTCCGGCAAAGAAAAGATCGAAATTAGTTCTCCCTGAGCCGCAAATTACCGATAGCGAGCTTCAACAAGTGGTCAAATTAGGGAGAACAAATGAACTGGCAAAAGAAGTAGCCAGTGAGAGCGGCATTGAAACCACAGAATTTCTGATGAATAATTATTCTGTAACTCCTACAGCAGCTGCAACTCCAAGAACCCCCATGTCTCAGAACGACAGAATCATGCAGGAAGCTCAAAATTTGATGGCCTTATCTCATGTAGACACACCTTTGAAAGGAGGTCTGAATACTCCACTTCACGAATCAGACTTCTCGTCTGTGACGCCGCAAAGTCAACAGATCGCCACTCCTAATACAGTTTTAGCCACTCCATTAGCTTCGGTGAGGAGTAACACTAATTCTGAATTCGCCACGCCGAAGGGGAGTGAAGTGTCTTTGAGCACTCCAGTTTTGAGAGACAGACTaaatttgaatacaaataaTTTGGGAACTCCGATGAACAGTTTTATGGGGGTGAAGGAACAATTAAGAGCAGGTTTGAGTGGTTTACCGCAACCGAAAAATGACTATGAAATTGTGGTGCCAGAACTTGAAGAATCGAATAGGAGTGAAGAACCAACAGTTAGTATGGTTGAAGATCAAGCCGATGTTGATGAAAAGATGGAGGCAGAATTGAGGGCTAAGGCTGCAAGGGAATTAAAGATGAGATCTCAGGTGATTCAGAGAACTTTACCACGACCGTCTGAAGTTAATCTGTCTGTGTTGAGGCCGCCTCAGGAAATGTACGGTTTGACAGAAATGCAGAAAGCTGAGGAACTCATTAAAGTGGAAATGGCAACGATGATGATTTACGATAATATCCATAATCCCCAGACCATACAAGGTAAAAAAAAATCGCCAGGAAATGCGGAACTGGCGTTTTTGGATCAACATCCGTATCAAACTTTCAAGAAAGAGGATTTAGAAGTTGCCAGGAAGATGATCAAAGATGAAATGGAAGTAGTGAAGAAGGGTATGAACCACGGAGATTTGTCCCTAGAAGCCTATTCTCAAGTGTGGGAGGAATGCTTGGGGCAAGTTCTCTTCCTTCCAAATCAACAACGTTATACAAGGGCGAATTTGGCAAGTAAAAAGGACCGATTGGAATCACTCCAGAAGAGATTTGAGCAAAACCGAATGCACATGGCTAGAGAAGCCAAGAAAGCTGCAAAACTAGAgaagaaaattaaaattttaactGCCGGTTaccaaaataaagttcaaaaaatgatgagtaACATACAAGAATTGAACGAACAAGCAGATCAGTTGGATTTGGAATTGAATTCGTTGAAATTACTGGCAGAACAGGAGAAAATCGCGATGGCGAAAAGAGTACAGagtttaacAGAAGATGTGAATAGGCAGGTAGACAGAGAGAAGACTCTTCAACAAAGGTATAGTTCACTCCAGGACCAGATAAGAGAAATTTATGGACAAGCACTAGCACAAAAGCAAGCAACTGAAATACCTACAGTGCGATCCAATATTGAACCTTCAGAAAATAATATAGATCATTCAGAAATAGAGAATATGAATGTGGAACAATCCAATGATGATTGTGAATGA
Protein Sequence
MPRVMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSSVEDEKLLHLAKIMPTQWRTLAPIIGRTAAQCLERYEYLLDQAQRKEEGEYANDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKKRELRAAGIEVASRPKKKKGIDYNAEIPFEKLPAIGFYDTSKETVDPIGPDFKKINDNDENDRRKDVNEKKRKKDSNVPNEIFKNDAPAKKRSKLVLPEPQITDSELQQVVKLGRTNELAKEVASESGIETTEFLMNNYSVTPTAAATPRTPMSQNDRIMQEAQNLMALSHVDTPLKGGLNTPLHESDFSSVTPQSQQIATPNTVLATPLASVRSNTNSEFATPKGSEVSLSTPVLRDRLNLNTNNLGTPMNSFMGVKEQLRAGLSGLPQPKNDYEIVVPELEESNRSEEPTVSMVEDQADVDEKMEAELRAKAARELKMRSQVIQRTLPRPSEVNLSVLRPPQEMYGLTEMQKAEELIKVEMATMMIYDNIHNPQTIQGKKKSPGNAELAFLDQHPYQTFKKEDLEVARKMIKDEMEVVKKGMNHGDLSLEAYSQVWEECLGQVLFLPNQQRYTRANLASKKDRLESLQKRFEQNRMHMAREAKKAAKLEKKIKILTAGYQNKVQKMMSNIQELNEQADQLDLELNSLKLLAEQEKIAMAKRVQSLTEDVNRQVDREKTLQQRYSSLQDQIREIYGQALAQKQATEIPTVRSNIEPSENNIDHSEIENMNVEQSNDDCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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