Basic Information

Gene Symbol
rcor2
Assembly
GCA_951802165.1
Location
OX637699.1:27891717-27899610[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9e-10 2.1e-06 28.9 0.0 3 45 129 171 127 172 0.95
2 3 0.039 92 4.5 0.5 26 44 230 249 229 250 0.91
3 3 3.5e-15 8.2e-12 46.3 0.0 3 46 348 391 347 391 0.98

Sequence Information

Coding Sequence
ATGGTTTTGGCCGAGAAAAATGGTGAGAATTGCAGAAATGGACGAAGAAGTAGGGGCCCAAGTCCCAATGGACATGCACAAGCGGACTCTACAAGTGAGGATGAAATTCCAGTGGATAAAATTCGAGTTGGAAGAGATTATCAAGCTGTTTGTCCAGAATTGCAACCTGAAAACCTAAGACAACCGGAACTTCTTGCTGATAGAGCACTCCTAGTTTGGTCCCCTACCGAAGCAATATCAGACAACAAACttgaggaatatatagTTCTTGCGAAGGAGAAGTATGGTTACAATGGAGAGCAGGCTCTAGGGATGTTGTTTTGGCACAAACATGACTTGGATAGGGCTATTCTAGATCTTGCAAATTTCACACCATTTCCAGATGAATGGACAGTTGAGGATAAGGTGTTATTTGAACAAGCATTTCAGTTCCATGGGAAAAGTTTTCATAGGATAAAACAGATGCTTCCTGACAAAAGTATTGCAAGTCTTGTAAAATACTATTATGGTTGGAAGAAAACGCGAACACGCAGTAGCCTTATGGATAAACAAGCAAGAAAATTACAAAACACAAAAGATGACGGAGTAGCATCGGAAGCTGGATCTGAAGTTGGGTCGAACGAGGAGTCAGATCATGAAGAAAAGggtgagggcGGTCAGTGTACAAATTGTGGCATCCATTGTACAATTATGCAACATACCCCCAAAGGAAAGCATTGCAATTCCTGCTATCAGCACTGGAGACGGACAGGAATGCAGAGGCCCACTTCCGGACCCGTCGGGGGCAAGCGAGGAAACTCTTTGGGGGCGCGCCACAAGCGCAAGCCCCCCAAAGGAATGTACATCAGCCACGATGACCTTGCTGCAATGGCTTCTGGTCAGACGGGGGTACAAATGCTTAAAGCTATGGACAGGGAGATTGACTCGTTTCAGAGACAAGTTCAACTAAATAAACAACAGATAAGTTCCTTGAAACGCAAGCACTCCGATTCTCTGGAAGATCTGAGACCTAACTGCGAATCTAGCATGAGAATCAATGCAAGATGGACGAACGAAGAACTCCTTCTAGCTGTACAAGGTGTCCGTAAATATGGCAAAGATTTCAAGAGCATAGCTGACGTGCTGGGCAACAAAACAGAACACCACGTGCGTAATTTCTTCGTTAACTATCGCAAACGATACAATCTAGATAGCATTTTGAAGGACTGGGAAAAAGACAATGGACCCCTGCCTGAAGAAGAACTGAAGATGGATATCGATGAAATTCCTAACGACGACGTAATTTGCATATCACCGGTACCCAatggtaattccaaaaaggaatTTAAAAATGGGAAAGCCGCGCCAGTAGCAACTAAATGA
Protein Sequence
MVLAEKNGENCRNGRRSRGPSPNGHAQADSTSEDEIPVDKIRVGRDYQAVCPELQPENLRQPELLADRALLVWSPTEAISDNKLEEYIVLAKEKYGYNGEQALGMLFWHKHDLDRAILDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIKQMLPDKSIASLVKYYYGWKKTRTRSSLMDKQARKLQNTKDDGVASEAGSEVGSNEESDHEEKGEGGQCTNCGIHCTIMQHTPKGKHCNSCYQHWRRTGMQRPTSGPVGGKRGNSLGARHKRKPPKGMYISHDDLAAMASGQTGVQMLKAMDREIDSFQRQVQLNKQQISSLKRKHSDSLEDLRPNCESSMRINARWTNEELLLAVQGVRKYGKDFKSIADVLGNKTEHHVRNFFVNYRKRYNLDSILKDWEKDNGPLPEEELKMDIDEIPNDDVICISPVPNGNSKKEFKNGKAAPVATK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348798;
90% Identity
iTF_00348798;
80% Identity
-