Adec012879.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- -
- Assembly
- GCA_951802165.1
- Location
- OX637697.1:12004593-12005018[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-13 7.1e-10 39.7 0.0 3 39 17 53 15 57 0.88 2 2 9.2 7.1e+03 -2.0 0.0 32 42 117 128 117 129 0.78
Sequence Information
- Coding Sequence
- ATGGTCCGAAACTACATAAAAACGAGGAACACCTCTGATGTTTcaaaagatattttgaaaaacgcgGTACAAACGGTACTTAGTGGTCAGATGTCGATTCGCTTGGCTGCAAATACGTATAACATATCTAAGTCAACTCTTTTTGATCATGttaagaaaaaaaaagcaaACGGAAACGAAGTCAACTCATCGGATGAGGATGCATTACCCAAATCGAAGTACGCTACTCGACAAATATTCTTGCGAAGAGAAGAAAAGCAGTTGGAAAGTTATTTACAAAACAAtcttccaaaatattttatgGGCTCACCTACAAGGCTACTAGACAGTAAGCGTATGAATATGCTGTCAATTTGGGTAAGACGGTACCAGATTCATGGCACGAAAGCCAAATGGCCGGAATGGAGTGGATGCGATCATTTATGA
- Protein Sequence
- MVRNYIKTRNTSDVSKDILKNAVQTVLSGQMSIRLAANTYNISKSTLFDHVKKKKANGNEVNSSDEDALPKSKYATRQIFLRREEKQLESYLQNNLPKYFMGSPTRLLDSKRMNMLSIWVRRYQIHGTKAKWPEWSGCDHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -