Basic Information

Insect: Acyrthosiphon pisum
Gene Symbol: Hivep2
Assembly: GCA_005508785.1
Location: NC:4915509-4939044[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00045 0.022 15.1 0.4 2 23 42 64 41 64 0.97

2 11 0.28 14 6.3 0.3 1 23 192 215 192 215 0.91

3 11 0.0016 0.082 13.3 0.6 1 23 223 245 223 245 0.97

4 11 0.00016 0.0081 16.5 3.3 1 23 251 274 251 274 0.98

5 11 0.019 0.95 10.0 2.9 1 23 535 558 535 558 0.95

6 11 0.0029 0.14 12.5 0.5 3 23 746 766 745 766 0.98

7 11 2.8e-05 0.0014 18.9 3.1 1 23 772 795 772 795 0.97

8 11 0.0065 0.32 11.4 0.9 1 23 822 846 822 846 0.97

9 11 1.3 64 4.2 0.5 1 23 926 949 926 949 0.90

10 11 0.001 0.052 13.9 2.2 3 23 983 1003 982 1003 0.97

11 11 0.077 3.9 8.1 3.2 1 23 1009 1032 1009 1032 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00045	0.022	15.1	0.4	2	23	42	64	41	64	0.97
2	11	0.28	14	6.3	0.3	1	23	192	215	192	215	0.91
3	11	0.0016	0.082	13.3	0.6	1	23	223	245	223	245	0.97
4	11	0.00016	0.0081	16.5	3.3	1	23	251	274	251	274	0.98
5	11	0.019	0.95	10.0	2.9	1	23	535	558	535	558	0.95
6	11	0.0029	0.14	12.5	0.5	3	23	746	766	745	766	0.98
7	11	2.8e-05	0.0014	18.9	3.1	1	23	772	795	772	795	0.97
8	11	0.0065	0.32	11.4	0.9	1	23	822	846	822	846	0.97
9	11	1.3	64	4.2	0.5	1	23	926	949	926	949	0.90
10	11	0.001	0.052	13.9	2.2	3	23	983	1003	982	1003	0.97
11	11	0.077	3.9	8.1	3.2	1	23	1009	1032	1009	1032	0.95

Sequence Information

Coding Sequence: ATGTGGTTATCGGGTGCAGTGCATCGACTTTCGtgGTCTGAAATGTCATCGGAAATGTTGCGCGTAGACAATCTGCGACAAAGGTTGTTCTGTAATTCCGTGTTGGACACGAAAAGGGAAAGTCGGTGTCCCGTGTGCAACGCCATGTTTTCGACCACTTACAGTATGCGCCTGCACTTGCAGACTGTCCACATGGACTTAAAACCACAAAACCTGACCGCAAAAACGTTTTACCGCGAGTTCAATAACAACAATagcataaacaataataacaataacagcagtaataacaacaacaacaacagcgtGGCATTCGCCGCAAAGTCACCGGCAAAAACGACGTCGTTCAATAACAGCCCGGAACTCGCGCACGTCACACCCGTCAAGTCTTCGTACAACGGCGACTCGACGTGTAGCACGGACTTTAGCGATGGATATCCGTCGGACAAGGATTCGTATTTTGGCGGCTCGCCCAAGGACGAAATTCCTCTGTCCGTGGCGGGTGGCGGTTTTATGTCACACTCGCCGGCCAACAAGAGGAGCAGCAACGGTCACATGAAAGCCAAGCGCACGTACGCGTGCAGGCTGTGCTCGACCGTATTCGGCAACCTGCGGGCGCTCAAGGGCCACAACTCGTCCAGCCACAACAAGTCCACCAATGGCATGTACGCGTGTAATATATGTGAGTTCGCCAGCACTGAAAAGGCGTCGCTGAACCACCACATGAAAGGCCACACGGGCGAGACGCCGTACGTGTGCAAAAAGTGCTCGTATGCGTTCACCACAAAGGCCAACTGCGAACGGCACCTGCGCACCATACACAAGGCGTCCAACGCCGAAGTAAAGGCGTCGATACTTTTCAAGAACGAGGATAAACCGGCTGGTTCAGCGCAGTCCACCAACGACGAGGCAACCGCCGACAAGAGCGAAGAACTGTACCATCACCTGCGTTTGCAGCATCACAACCAAACGACGACGGACTATTCCCAGTACGAATCGTCCGGGCAAAAGAGCTCGGAGGACGATGAGGACGAGTACGACGAGCCGCTGGATCTGAGCATGAAGCGTTTCAAACAGGACTTGGACTGCGAGCCGCAAGATTTATCCATCAACGGCAAGaggtcgtcatcgtcgtcgtcgtccgccGCAGCCGTCGCTGCCGGTGATCACACGGACGAGGAGGACGTCAAACCGACCGCAACGATGGCGTTTCGCGAGCAATTCGTGCCACACGCCCCGCCCGGCTTCATGGACCTGTCATTACCCACGCCTTTGCACGCGTATTTCCTCAACGAGCACCGCATGTTCTTCAATGGAATATATCCGGCCGCGGAACGCATGCTACCAATACCACTCACCGTCGACATGATCCGCGCAATGCGGCAGATGAACGAACCAGTGGTCGTCCCAGCTCAAGAGCTGGCAGACCCCGTCGTTCCACCAAAGCCAGAGACGCCCGAGCCCGCGGCCGTGCCGCCTCCACCACCAGCACCACTGTCCGTGGACGTAGCGCAAAAACCAAAAGACAGCAATGGGTTGCGGCTGGTGATGAAAAACGGTATTCTAGTGCCCAAACAGAGACGGTTTAGGACGGATAGGCCACATGTCTGCGAGACGTGCAAACGGGCGTTCACGTTGAAGTCAAACCGCGACCGGCACGTCAAAAACCAACACCCGACCGATTGGCACAAGAAACCCCGGTCGTTGTCGTCCAAGTCAGAATCGCAGTTCTCGACCGTCAAACAAGAACAGCAAGATACGTCGCCGATATCGGATCAAGTGAAAATGGCCTTGTCGTTGAAATGCCGGCCGTCAGAACAGCTGCTGCGGACTGAAGACGAAGTGGATGAGGATGAAGAAGATGATGACGTAGTGGAGGAGGAGGACAAACTCGTCATAGTAGAAGACGGCGTAGAGCACAACAAGCCCGTCGGAGTCAAGGAAAAGTGCACCGAGGTCAAAGAGGAGTCCGCCGATCTGGTCAGTGTGTCCAGATTGCTGGACAACGCTTCACATCAGACATTTCCGCAATTCACCAGATCTGACGAGGATCACAACGAGGTAACCAGCAGTGAAGAAGAGCACAGCGAGGCTGCCAGCTATTCCGAAAACGACGGTTCTAGTATCAATGCCGTCAACAACAACATCGATATAAATTTTAACACGGACAAGGACGAGAACCGTGAAAAGCGGAAGAAGGTCAGTGCGTACGCAGCCGCGCCTAACAGAGTGCTGTGCCCGTTCTGTTACCTGTCATTCCCGTGGACTTCATCACTGAAACGGCATATCCGCACGCACACGGGTGAAAAGCCGTACCAGTGCAAACACTGTCCGCTGTCGTTCTCGACCAAGTCAAATCGCGACAGGCACATCCTACGGCTGCACTGCACGCCGCCCAGCAAGTCAGCCGCGTCGTCCGACAACGAGACGACCGCCGCGGCGCCGACCGACGCTAAGAACGCGTACAAATGCACATCGTGCCCGAACGTGACGTTTTCCAAGCGCAAGAACCTGATCAGCCATATAAATCGGGTGCACTTTGACAAGAACGGCGGCGGTGGCGCCGCGGGAGAGGATGACGAACGAGGTGGTGACGGTACCGAGGACGACGGTGGCGAGTCGGAACGTGACTTCTCGATGGCCATGTTCAACGGATGGTGCGGCAACAACGCGGCCCCGGCGACCACCACGGCCAACACCACCACACAGTcagccgccgccaccgccgcctcTACCATCACCCCGTCCAACACGGTCACCGGATCCGAACCGTGTTTCAAGTGTCATCTGTGCGATAGCAGCTACCTGGACAGGCAGGGTGCTCTGGATCACATCCGGATCGACCACGCCGAGTGTTACGAGATACTAGTATCGCAGGGGGCCATGGACAACGACCATGACTCGTCGGCCGTCAAACAAGACGACGTGGAAAACAGAAAGGTACTTTGCGCATTCTGCCTGCACCGTTTCTACTCGGCTGAGGACCTGCGCCGTCACATGCGCACCCACACCAAAGAACAGCCGTTCGCGTGCCTGTCGTGCAAGCGTCGGTTCACGCTCAAGCACAGCATGGTCCGGCACATAGCCAAAAAGCACGGTGGCTGTCAAGACCAGCAGTacggaggcggcggcggcggcgctgGAGGCGGTAGCGACCACGAACGGAGGTCCGCCAGTCCTCCGAGCACCCCTCCGCCGACGGGACCGGTCACAGGTTACGAGGAATGTTGCGGCAACCGGACGGACACGGGTCTGATCGGCACGCTGCTTGGCATCCGAGACAGCACGGTCATCGACCAGGTGTTGCAGACGAAATCGCCCGAAGACGCGGCTAAAATGTTGGGAATCAAAAGCAGCAGCGACTAG
Protein Sequence: MWLSGAVHRLSWSEMSSEMLRVDNLRQRLFCNSVLDTKRESRCPVCNAMFSTTYSMRLHLQTVHMDLKPQNLTAKTFYREFNNNNSINNNNNNSSNNNNNNSVAFAAKSPAKTTSFNNSPELAHVTPVKSSYNGDSTCSTDFSDGYPSDKDSYFGGSPKDEIPLSVAGGGFMSHSPANKRSSNGHMKAKRTYACRLCSTVFGNLRALKGHNSSSHNKSTNGMYACNICEFASTEKASLNHHMKGHTGETPYVCKKCSYAFTTKANCERHLRTIHKASNAEVKASILFKNEDKPAGSAQSTNDEATADKSEELYHHLRLQHHNQTTTDYSQYESSGQKSSEDDEDEYDEPLDLSMKRFKQDLDCEPQDLSINGKRSSSSSSSAAAVAAGDHTDEEDVKPTATMAFREQFVPHAPPGFMDLSLPTPLHAYFLNEHRMFFNGIYPAAERMLPIPLTVDMIRAMRQMNEPVVVPAQELADPVVPPKPETPEPAAVPPPPPAPLSVDVAQKPKDSNGLRLVMKNGILVPKQRRFRTDRPHVCETCKRAFTLKSNRDRHVKNQHPTDWHKKPRSLSSKSESQFSTVKQEQQDTSPISDQVKMALSLKCRPSEQLLRTEDEVDEDEEDDDVVEEEDKLVIVEDGVEHNKPVGVKEKCTEVKEESADLVSVSRLLDNASHQTFPQFTRSDEDHNEVTSSEEEHSEAASYSENDGSSINAVNNNIDINFNTDKDENREKRKKVSAYAAAPNRVLCPFCYLSFPWTSSLKRHIRTHTGEKPYQCKHCPLSFSTKSNRDRHILRLHCTPPSKSAASSDNETTAAAPTDAKNAYKCTSCPNVTFSKRKNLISHINRVHFDKNGGGGAAGEDDERGGDGTEDDGGESERDFSMAMFNGWCGNNAAPATTTANTTTQSAAATAASTITPSNTVTGSEPCFKCHLCDSSYLDRQGALDHIRIDHAECYEILVSQGAMDNDHDSSAVKQDDVENRKVLCAFCLHRFYSAEDLRRHMRTHTKEQPFACLSCKRRFTLKHSMVRHIAKKHGGCQDQQYGGGGGGAGGGSDHERRSASPPSTPPPTGPVTGYEECCGNRTDTGLIGTLLGIRDSTVIDQVLQTKSPEDAAKMLGIKSSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00135687;
90% Identity: iTF_00134839;
80% Identity: -