Apis002398.1
Basic Information
- Insect
- Acyrthosiphon pisum
- Gene Symbol
- -
- Assembly
- GCA_005508785.1
- Location
- NC:22878271-22879837[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-10 6.6e-07 29.3 1.2 3 45 5 63 5 64 0.91 2 2 0.63 4.4e+02 1.0 0.0 6 17 164 175 163 178 0.89
Sequence Information
- Coding Sequence
- ATGTCGGCTATAGCATTTACATCACAAGAAGATGAACTTTTTATTGAATCCGTGCGTAAATATCCAGAGCTTTATGACTGTTCACACAtgcaatatttcaatttaatagttaaagATGCAAAATGGAAAGAAATTTCCCAAAAAATTGGAAAGTCTGtcGAAGATTGCAAAAAGCGTTGGAAAAATATCATAGATTCTTACAAtcgtaataaaagaaaattgggTACGGGTTCTGAAAGATCGCTAAAAAAAAAGTGGCCTTTGGCAGCACACGTATCTTTTCTAGATAAAGTTCAACACGAACgaaattCTTCATCAAATATAAGTGTAACTGAAAGCGCAACAGTACTACATGAAGAAGGAGAACTTGACAGAGGAATAGGGGATGAGTTTGACGGAGGAATAACAGAAGAAAACGAAAAAACCAAAGATAGTCCACAACGTATAAGATCGAAGCAGGACAAGTTGGCAGTCCTCCTTGCAACAAGAAATGAAgaacaaaaaaagttaatagCAGCTATCCAGTCTCAAAATGAGACAATTTTAAGTAGAAAAATGAATGAGGATGAtgatatagatttatttttcaaaagtttggCCATGACTGTGAAGAAGTTACCTACTAAAGGTATCAACgaagtaaaaatgaaaacattagCATTGGTGGCTGAAGCTGAAGAAAAATATGCTGCACAACCAACAAGAAATTTTACAGCTCAAGGATATTTTAATCAACCAAATGAAAACTCCATACAAATGTCACCTTCAAATGCATCAACTTCAACATACGGTACATCTGAAAGCTCACAAGATTga
- Protein Sequence
- MSAIAFTSQEDELFIESVRKYPELYDCSHMQYFNLIVKDAKWKEISQKIGKSVEDCKKRWKNIIDSYNRNKRKLGTGSERSLKKKWPLAAHVSFLDKVQHERNSSSNISVTESATVLHEEGELDRGIGDEFDGGITEENEKTKDSPQRIRSKQDKLAVLLATRNEEQKKLIAAIQSQNETILSRKMNEDDDIDLFFKSLAMTVKKLPTKGINEVKMKTLALVAEAEEKYAAQPTRNFTAQGYFNQPNENSIQMSPSNASTSTYGTSESSQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01347044;
- 90% Identity
- iTF_01347044;
- 80% Identity
- -