Apis015292.1
Basic Information
- Insect
- Acyrthosiphon pisum
- Gene Symbol
- Smarcc2
- Assembly
- GCA_005508785.1
- Location
- NC:19292007-19296338[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-15 2.7e-12 46.5 0.2 3 44 139 180 137 182 0.95 2 2 9.4 6.6e+03 -2.8 0.1 8 18 388 398 386 399 0.84
Sequence Information
- Coding Sequence
- ATGATTGATACATATAGACTTAATCCAACTGAATACATGACGAGTACCGCAGCTAGGCGCAATTTGGCTGGTGATGTTTGTGCAATTATGAGAGTTCATGCATTTTTGGAGCAATGGGGTCTTATTAACTATCAAgttGATGCTGATAGTAGACCAACTGCAATGGGGCCACCACCTACATCTCATTTTCATATTCTATCTGATACACCCTCTGGTCTACAACCTGTTAATCCTCCTAGAACTCAACAACCTTCAGCTGCTAAAACACTTTTAGATTTAGAGAAAAAGCCTGTAATAGCAGATAAAGATGCTGGTCATCACCCTGAACCATTATCTAGTTTTGGGCTTAAATTAGATCAatatgcCAAAAAACCTGGTTTATTACGAAATAAAACAGCTGCTGGTATGACAAGAGATTGGACTGAACAGGAAACTTTATTACTACTTGAAGGATTAGAAATGTATAAGGATGATTGGAACAAAGTTTGTGAACATGTTGGCACAAGAACTCAAGAtgaatgtatattacattttcttcGTTTACCCATAGAAGATCCGTACTTAGAAGATTTTGAAACTGgtgGTGCTCTGGGTCCTTTGTCATATCAACCAATTCCATTTAGTAAATCTGGTAATCCTATTATGTCTACTGTGGCTTTTTTGGCATCAGTAGTGGATCCTAGagttgctgctgctgcagctAAAGCTGCTATGGAAGAATTTGCTGCGATTCGAGATGAAGTTCCTTCAGCTTTGATGGATGCTCACGTTAAAAACATTGAAGCAGCTACTGCAGATGGAAAATATGATCCAGCTGTTGGACTTTTACagAGTGGTATTGCAGGCACTTTCCcagaaaaagaagaagaaaatgaaaaagaaaagaagGAACCAGAAGATGTCAAAGATCCGTCATTGACAACAGATAATGACAAATCCATTCGAGCTGATAAAGAAGGAGTCTCCGATAAAGATAAAGAGCAACCTATGGATGTTGACAAGAAACCTTGTGAAGAAACTACAGCCAGTACACAGTCTACTACTGTTAACCGTACTGCAGAAGAAGAACCTGAACGAATAGTTAAGgaCTCTGAAGTAcaagctgctgctgctgcagcatTAGCCGCAGCTGCCGTCAAAGCAAAACATTTAGCTGCAGTAGAAGAAAGGAAAATAAAATCCCTTGTTGCATTATTAGTAGAGACTCAAATGAAAAAACTAGAGATAAAGCTAAGACACTTTGAGGAATTAGAAACAACTATGGAAAGAGAACGTGAAGGGTTGGAATATCAGAGGCAGCAGTTGATACAAGAGCGACAACAATTTCATTTAGAACAGCTAAAAGCCGCTGAATTCAGAGCACGTCAACAGGCCCATCATAGACTACAAGCCACAGGTGTTCCTCCCTCGGTCCCAAATCCAGAACATGTAGCTCCTGCATCACCTGCACCTCCAATGGCcacataa
- Protein Sequence
- MIDTYRLNPTEYMTSTAARRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTAMGPPPTSHFHILSDTPSGLQPVNPPRTQQPSAAKTLLDLEKKPVIADKDAGHHPEPLSSFGLKLDQYAKKPGLLRNKTAAGMTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDFETGGALGPLSYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIRDEVPSALMDAHVKNIEAATADGKYDPAVGLLQSGIAGTFPEKEEENEKEKKEPEDVKDPSLTTDNDKSIRADKEGVSDKDKEQPMDVDKKPCEETTASTQSTTVNRTAEEEPERIVKDSEVQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHHRLQATGVPPSVPNPEHVAPASPAPPMAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -