Apis001833.1
Basic Information
- Insect
- Acyrthosiphon pisum
- Gene Symbol
- kn
- Assembly
- GCA_005508785.1
- Location
- NC:65948732-65964539[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-91 5.4e-87 292.3 0.4 43 182 18 157 13 157 0.98
Sequence Information
- Coding Sequence
- atgtaccgCACTgTATccataagaatatattttttttttatttctgtgtaCAGTATCGGCGTGGGAAGGGCACATTTCGAAAAGCAACCACCGAGCAATCTGAGAAAATCCAATTTCTTTCATTTTGTGATCGCACTGTACGACAGGTCTCAGCAGCCAATTGAAATCGAACGGACCGCGTTCATCGGATTCATCGAAAAGGATCAGGAATCCGAGTCACAGAAGACCAACAACGGTATTCAGTATAGACTGCAGCTGTTGTATGCTAACGgtgtGCGACAAGAACAAGACATATACGTGAGGCTCATCGATACCGTTACGAAACAGGCCATCATTTACGAGGGTCAAGACAAGAATCCAGAGATGTGCCGGGTGTTGCTCACGCACGAAGTCATGTGCAGTCGTTGCTGTGATAAGAAAAGTTGCGGTAACAGAAACGAAACACCATCCGATCCGGTCATCATCGACAGGTaa
- Protein Sequence
- MYRTVSIRIYFFFISVYSIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRSQQPIEIERTAFIGFIEKDQESESQKTNNGIQYRLQLLYANGVRQEQDIYVRLIDTVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00468756;
- 80% Identity
- -