Apsi018439.1
Basic Information
- Insect
- Acronicta psi
- Gene Symbol
- GATA-B
- Assembly
- GCA_946251945.1
- Location
- CAMIUM010000083.1:167255-169915[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-18 9.4e-15 54.1 3.9 1 34 11 43 11 45 0.97 2 2 1.3e-17 2.1e-14 53.0 7.2 1 34 78 110 78 112 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTCGCCGCGCCCCACGCGCCCGCGCACGACATGGGCACCAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACGACGACGACGTCGCTGTGGCGGCGTAACTCTCTCGGCGAGACCGTTTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGACCGCTCGCCATGAAGAAAGACTCTATACAGACGAGAAAAAGAAAGCCTAAGAATACCATAAAATCGGAACGCAGTATAAAGACAGCCGTTCAGCGCACCGTGACGTCAGCGGTGAAGATTGAGAATCTGCTGGACGGCGGATCGGGCGCAGTGAGCGGCGGCGCGCGCTCCCCGCTGGCGCTCAACTACTACGTGCAGCAGCACGCGCTCAAGCTGGAGGAGCCGCCGCCCGCGCACAACGCGCACGCGCAGCCCGCGCAGCACTCGCACGCCGCGCACGCGCCGCACGCGCCGCTGGCGCCGCACTCGCACGCGCACGTGCAGCACGCGCTGTACGACGACGACTACCGGCGCGCCGCCGACGACCGCCTGGACCGGCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAAPHAPAHDMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNTIKSERSIKTAVQRTVTSAVKIENLLDGGSGAVSGGARSPLALNYYVQQHALKLEEPPPAHNAHAQPAQHSHAAHAPHAPLAPHSHAHVQHALYDDDYRRAADDRLDRPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00071972;
- 90% Identity
- iTF_01539276; iTF_01378043;
- 80% Identity
- -