Basic Information

Insect: Acronicta psi
Gene Symbol: ZEB2
Assembly: GCA_946251945.1
Location: CAMIUM010000066.1:813811-821894[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00012 0.0075 16.9 1.4 1 23 218 240 218 240 0.99

2 11 0.0071 0.44 11.3 2.9 1 23 247 269 247 269 0.97

3 11 1.3 83 4.1 1.7 2 23 274 295 273 295 0.92

4 11 0.016 0.98 10.2 0.2 2 23 299 321 298 321 0.94

5 11 0.00012 0.0077 16.8 5.9 1 23 324 346 324 346 0.94

6 11 0.0029 0.18 12.5 0.2 2 23 350 372 349 372 0.94

7 11 0.025 1.5 9.6 0.2 3 22 379 398 378 402 0.91

8 11 0.0013 0.082 13.6 2.7 1 23 414 437 414 437 0.97

9 11 3.7 2.3e+02 2.7 4.8 1 23 443 466 443 466 0.94

10 11 1.9e-05 0.0012 19.4 0.2 3 23 477 497 476 497 0.99

11 11 0.00054 0.033 14.8 1.2 1 23 503 526 503 526 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00012	0.0075	16.9	1.4	1	23	218	240	218	240	0.99
2	11	0.0071	0.44	11.3	2.9	1	23	247	269	247	269	0.97
3	11	1.3	83	4.1	1.7	2	23	274	295	273	295	0.92
4	11	0.016	0.98	10.2	0.2	2	23	299	321	298	321	0.94
5	11	0.00012	0.0077	16.8	5.9	1	23	324	346	324	346	0.94
6	11	0.0029	0.18	12.5	0.2	2	23	350	372	349	372	0.94
7	11	0.025	1.5	9.6	0.2	3	22	379	398	378	402	0.91
8	11	0.0013	0.082	13.6	2.7	1	23	414	437	414	437	0.97
9	11	3.7	2.3e+02	2.7	4.8	1	23	443	466	443	466	0.94
10	11	1.9e-05	0.0012	19.4	0.2	3	23	477	497	476	497	0.99
11	11	0.00054	0.033	14.8	1.2	1	23	503	526	503	526	0.97

Sequence Information

Coding Sequence: ATGTATAAAATCGAAGAATCCAAGTGTAATTTCGCTAACAAAAGTGATACATCTGTTTGCCAGGCGTGTTTAAGCTCTGACCGAAAGCTATCTTCGATCGGCGAATTTGTTGATATTTTTATGCATATTTCCAATATTCCATACAATGTGACTAGTGTGTTGTCTCAACCGATATACCTGTGCTGGGAGTGTATGGCGATACTCAAGAAGATTAAACTTTTTAAAACTCAATTAGAAGAAGCGCAAAAGATATTGAGAAATGAGTTAGTTAAAAATAAGAAATGTCTACTGAACACTTTATCAAAATTAAGTACAAATAACTTAGATAATGTGATAATTAATATCACCCATAATGATGATGACGATAATAATGATGACAAAGAAAAGTTAGTCATCAAATATGAAAATGATTATTCTGATGATGATATAAATTATGATCAAAACAGTAATGATCTGTGCCTAGAAGAAATTAAAAAAGAAAAAGAAACACTAACAAAACAATATGTAAAAAAAAAGAAAGTGTCACATTATAGAATTATCTCCGATTTAAATTCGAAAAAGGCTTTGAGAAAAAAGTTTTCTATACAACCTGACGATCCAAAGATCTGGTTGGACAGAGAAAGAAATAGTGACTACTATGAGAGTTTGAGATATAAATGTAGTATGTGTGTCCGTGGGTTTGTTTCCAATAAGAAGCTTCAAAGTCATTTGTTGAAACATACTAAGTCCGCAGGTCCATATGCGTGCCAAACATGTAGCATACACTGCAGTAACAAGCAAGCGCTGTTGAAGCATGTGCGTGCGCATAACTACGCGTGGCAGTGCGCACGCTGCGGCTTCCAGTGCTACACCACGCGCAGACTGAGAGCGCACACAGATGCGCACAGCGCCGTCCAGTGCGCGCATTGTGACGCACAATTTCCAGATTTAACAGAATTTTATGCTCACTATAAAGCGTTGCATACTATATTCTTGTGTGATCACTGCGGGAAACGTTGTAAATCCAAAAACCTACTGCAAAAACATATGACCGAGCACACGGGGCTGACATGCGCGACATGCGCGCGCCGCTACAAGTCGCGCGCGGCGCTGCGCAAGCACGCGCGGGCGGCGCACGCGCACGGACACGCCTACTGCGTCGTCTGCGACAAGCACTACCGCAACCCGATCGTGTACAACCGGCACGTGCAGACCAGTGCCGCGCATGCGCACGAGAGGAATACACAGGTGACAAAGAAGTTTCAGTGTCCAGAATGTAGCAACACTTACTCGAGACGCGTGTACATGATGAATCACTACCGACACGTGCATACGAACCAATCCAAACATTACTGCGCACTTTGTGATAGGCATTTCCTGAACAGGACCCGGTATGTGGAACATATGAAGTACAACCACGAAGGAGTGAAGAAAGAGAAGAATAAACTGTGCAACGTGTGCGGCAGAGGATTCGCTGCTAACCGCACCCTGATTAACCACATGCGGACGCACTCGGGCGAGCGCCCGTACGAGTGCTCCTACTGCAGCGCCAAGTTCACGCAGAGGACGTCCATGCTGTCACACGTGCGGTACATACACTTGAAGGATAAACGACCGGCGGCGCGTTGA
Protein Sequence: MYKIEESKCNFANKSDTSVCQACLSSDRKLSSIGEFVDIFMHISNIPYNVTSVLSQPIYLCWECMAILKKIKLFKTQLEEAQKILRNELVKNKKCLLNTLSKLSTNNLDNVIINITHNDDDDNNDDKEKLVIKYENDYSDDDINYDQNSNDLCLEEIKKEKETLTKQYVKKKKVSHYRIISDLNSKKALRKKFSIQPDDPKIWLDRERNSDYYESLRYKCSMCVRGFVSNKKLQSHLLKHTKSAGPYACQTCSIHCSNKQALLKHVRAHNYAWQCARCGFQCYTTRRLRAHTDAHSAVQCAHCDAQFPDLTEFYAHYKALHTIFLCDHCGKRCKSKNLLQKHMTEHTGLTCATCARRYKSRAALRKHARAAHAHGHAYCVVCDKHYRNPIVYNRHVQTSAAHAHERNTQVTKKFQCPECSNTYSRRVYMMNHYRHVHTNQSKHYCALCDRHFLNRTRYVEHMKYNHEGVKKEKNKLCNVCGRGFAANRTLINHMRTHSGERPYECSYCSAKFTQRTSMLSHVRYIHLKDKRPAAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -