Apsi016824.1
Basic Information
- Insect
- Acronicta psi
- Gene Symbol
- ZNF131
- Assembly
- GCA_946251945.1
- Location
- CAMIUM010000066.1:822946-838297[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.4 87 4.1 0.8 1 23 263 286 263 286 0.93 2 9 0.0028 0.18 12.6 1.3 1 23 392 415 392 415 0.96 3 9 3.4e-05 0.0021 18.6 4.1 2 23 420 441 419 441 0.97 4 9 0.15 9 7.2 3.4 2 23 449 469 449 469 0.97 5 9 2.3e-05 0.0014 19.2 1.7 1 21 475 495 475 500 0.94 6 9 0.00091 0.057 14.1 0.3 1 23 508 531 508 531 0.94 7 9 0.00013 0.0079 16.8 0.1 1 23 537 560 537 560 0.97 8 9 9e-05 0.0056 17.3 0.4 1 23 570 592 570 592 0.93 9 9 4.4e-05 0.0027 18.3 1.4 2 23 599 621 598 621 0.96
Sequence Information
- Coding Sequence
- ATGGAGCAGGATGTTGATACAGAATACAGAACTGTGTGTAGTGCTTGCCTCAGCAGCGACCGTGATCTTTTTGATTTAAAATCGCCACAAGTCTATCAAATATTCCGATTACTTATGTACGATTTCGCGGGCGACAGGTTTGGTGAGTCGATACCAGAGATAGAGCAGATGGTTTGCTGGGAGTGTCTGGCACTGATGAAGAGGTTCCACAAGTTCAAATGGCAAGTACACAGTGCACAGGAGCATTTGAGGGTCCTAGCACTCAGCAGGACCCAGGAGAGTATGGACCACACATATATGTCTCAATCTTTGTCATGCTTGGAAATGTCTACTAAGTCAGAATATGACAAGATATACTTTGACTACTCATCGGGGTCTGATGAACAGGAATTTATATTGAGCACTACGCACCCCGAAAGCGTGAAGAGTGAGGAGTATGATGTGGGCCGGGATAGTAACATATTGGACATTGATGACCATATCCTAGAAGTGCCAGAAATAGTGCTAGAGAACCCAATGACCGGTGTGATGTCCCACATAGTGGTCGGTACAGATGCTCTGGTCTCCTCCGAACCAATCACGCGGAATGTTAACGGAGAGATGCCACATATTACAATTGGCCCCCTAATGCCGACAAAGATAGAGACAGTTATAATTCCAAGGAAACCAAAAATTGAATTGGCTGAGCCCAAGTCGTCCGGTTACATAACGGAGTATATGAGCGAAGCCGATATGCTGGCCTGCAGGGAGGAGGCCAAGAAAAAGGTGCAGTACGCCAGCTCTGTTTACAAATGTGAATTGTGCATCATCGGCTTCTACACACAGCAGCAAGTCGAAGACCACTTCATGCATGCGCACAGAGCTAAACCGGGGCAGGTGGCGTGCAAGGTGTGCTACGTGTACGTGGAGGCTCAGCGCCTGTCGTCGCACACGAGCGCGCACTACCTGCGCTACAGCTGCAAGCTGTGCGGCCACGCCGAGCTCGGCTGCAAGCTCATCCAGCTGCACGTCAAGGCGCACATGACCAGGCCGCCGCACAGCGCGCAGCACAACATCGGCGACGCCACCACCAAAAAGGGCAGAAAAAAGAAAGAAAAGGAAAAAGTTGCGACCGCCGCGCCGCCCAAGCCTGGTGATCTACGAAAACTTCTATCCAAGACCACTATAGAGGGATACCAGTGTCTGGAGTGCGATATGTTCTTCAAAAACTCCCGCGCTCGCAAGAATCATGTGGCGAGATATCACAGGGAAGGTCTACAGTGTGACCACTGCAAGAAGAGATTCGTTAACAGAACTAGTCTGACAACACATCTCAAACTGCACGAGGGTCCTCTGCCCCGGGCGGAGTGCCACATCTGCCACAAGATGGTGCGGGTCATACAGCTGAAGTACCACATCCAGCGTCACCAGAACAAGAGCCGCTACGAGTGTACCGACTGCAACAAGACGTTCTCGCACCTCGCCACGTACCAGGCACATCTCAAGTACTCCAGGGCGCATGCCTCCGAACAAGTGTTCAAGTTTCCATGTCCAATGTGCAACAAAGGCTACCCCACAAAGGAGGCGATGCAGGACCACTTCAACTACCAACACCTCGGCAAAACACTGCACAAATGTCCCGTTTGTGATAAGCCCATAGCGTCAAGAGCGAACGTGGAGAAGCATATGGCGCGTGTCCACGGTCAGAAGAAAGAGAAGCCAAGGAACCATGTGTGCCAAGCGTGCGGGAAGGCTTTCACTGACAAGAAAGCGCTCACACAACACGAAGTGATACATTCAGGCGAGCGGCCCCTCTCCTGCGATATCTGTCAACAGACGTTCAAGCAAAAAGCGTCCTTATATACACATAGAAAACGGGTACATAAAGTGTTCCCGGCGAAACGACTTGTTGAATATATGGATGCTAAGGTTAGCCAGTAA
- Protein Sequence
- MEQDVDTEYRTVCSACLSSDRDLFDLKSPQVYQIFRLLMYDFAGDRFGESIPEIEQMVCWECLALMKRFHKFKWQVHSAQEHLRVLALSRTQESMDHTYMSQSLSCLEMSTKSEYDKIYFDYSSGSDEQEFILSTTHPESVKSEEYDVGRDSNILDIDDHILEVPEIVLENPMTGVMSHIVVGTDALVSSEPITRNVNGEMPHITIGPLMPTKIETVIIPRKPKIELAEPKSSGYITEYMSEADMLACREEAKKKVQYASSVYKCELCIIGFYTQQQVEDHFMHAHRAKPGQVACKVCYVYVEAQRLSSHTSAHYLRYSCKLCGHAELGCKLIQLHVKAHMTRPPHSAQHNIGDATTKKGRKKKEKEKVATAAPPKPGDLRKLLSKTTIEGYQCLECDMFFKNSRARKNHVARYHREGLQCDHCKKRFVNRTSLTTHLKLHEGPLPRAECHICHKMVRVIQLKYHIQRHQNKSRYECTDCNKTFSHLATYQAHLKYSRAHASEQVFKFPCPMCNKGYPTKEAMQDHFNYQHLGKTLHKCPVCDKPIASRANVEKHMARVHGQKKEKPRNHVCQACGKAFTDKKALTQHEVIHSGERPLSCDICQQTFKQKASLYTHRKRVHKVFPAKRLVEYMDAKVSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039201;
- 90% Identity
- -
- 80% Identity
- -