Apsi013064.1
Basic Information
- Insect
- Acronicta psi
- Gene Symbol
- HIVEP1
- Assembly
- GCA_946251945.1
- Location
- CAMIUM010000046.1:2309368-2318762[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00016 0.0097 16.5 0.6 1 23 149 171 149 171 0.98 2 8 0.00063 0.039 14.6 1.2 1 23 177 201 177 201 0.89 3 8 0.0054 0.33 11.7 0.0 1 21 427 447 427 448 0.93 4 8 2.6e-06 0.00016 22.1 2.0 1 23 1196 1218 1196 1218 0.99 5 8 8.4e-05 0.0052 17.4 3.3 1 23 1224 1248 1224 1248 0.92 6 8 1e-05 0.00063 20.3 0.9 2 23 1651 1672 1651 1672 0.97 7 8 0.00028 0.017 15.7 1.5 1 23 1678 1702 1678 1702 0.92 8 8 0.0013 0.078 13.7 2.6 1 23 1723 1747 1723 1747 0.93
Sequence Information
- Coding Sequence
- ATGCCGCTTACACAAGAAAAACGTTTAGATAGTAACTTCTCTAATAACAATGATCACAGCTATCTTCATAAGAAATTCAAAAAAATGGCATCTACGATGTCTGCGTTTCCTGGAAATCTACCAAAAACAGGGGAAACCAGACATAAGGAAACAATTGTATCGTCAACTGCTTGTAATCTTACAATATCCAATGGTAGTATCGCAGCAGCGCATCCAGAAATAGAGAAAATAAAAATAAAAGCAGATAAACAGCATTTAGAAGTTCAGGATGCGGAAAAAAATGTACAAATTAATTATAAAATTGAAAATAGTAGATTAAGTCATGTAAATAATATTGTTCAAGTAACTGGTCAGACCAGTTTTACTGATGAATTTTCAAATAAGACTGAGAATCTTGAAAATGAATTAATTAAAGAAGCCTACAATGGTGGACTTGGTGGACGTTATATATGTCCTTACTGTAAATTATCTTGTGCCAAGCCTTCAGTTCTTCAAAAACATATCAGAGCTCATACTAATGAGAGACCATACCCTTGCGTACCTTGTGGATTTGCTTTTAAAACGAAATCCAACTTATACAAACATAGAAGATCAAGAACACACGCCTTAAGATTGCAAGGAGCTGACGTTTCTGTCACCTTGAACGACGACGACTTATCAGGAGGTTCAGAAAGTGATACATCTATTCCAGCTACATCTGTGTCAGAAACTGGTTCTGATGCGTCTATAATTCGGGCCGAAAATGTAGAATCGAATGATTCATCGGAATTAATAATTGATACTAGCTTACCATCTACGACCATGAGCTTTTCTTTAATAGATAACAGTAAATCAAAATCAATTTACAAACCTAAATTTAGAGCAGCATTATATCAAGAAAGCGACGAAAAAGATAAAGTGAAAAAATCCATTTCACCGAATGCTGATTTTCTTACGGAACATATCTCAAAAATTATATCAGATAATGAAGCTATTGTGGACGTTATAGAAACGCCATTACAAAAGAAATATGGTAAAATTAAACAGATAGCTGAAAGTAAACAATTTATGGCAGAATTAGCTGAAATAAAATCAGAACCAACACCACTAAATTTGACCAAACCGAATCATGACAGCGAGAACTCTTTTAGAAAAAGATCTCATTCAGAAAGCTTTTCGCAGAACGATCATCAAAAACATCCTTTAAACCCAGAAGGATCTATTATAAAAGATCTTCTTTTAAAAACTAAACTAAATGGCTTAACATCAGTCACAGGCGAATTGATCGATGGGCCCATATTTATTTGTCCTTTATGCCAGATAATATACAGAAGTGCAGACAATTTAGAAACGCACAAAATGTACTATTGTAAAGGAAGCGTTAACACAAATACAATATCTCAAAAAGAAATGAAATCTATAAGACCCGAAAACATATTTGTTAGAAGCAACTCTATAAACGTCAGACTACCTGAATCACCATCAAATTATTCAAGATCCATTTCAACGTCAAAATCATCACCTTCGAGAATCAAACCGGATAATCTTATAATTATGAAACCAGAATCAAATGATGTTGTTGCACCTTTACCATCACCAGGTCCATTACTGGGAAATACTAGACTTGTAGATACTAGAGTGCCAAATGATTATGCGAGAAAAAATGAAGGTTTTAAAGTAAAGCCAATAGCAAGCCCAAAACGAAGAATTGACAATCGAGCTGACACTTATAGTCCAAGATTAATAGAAAACATTTCACCGAGGTCAACCGATTTGTACTCACAAGCTAAGATAAGGTGTATCGATGCAAACTCTACATCTCTACGGACAATGGATGAAATGTCACAACTTATGCGACATAATTCAACCTCCCTTCAAATGTTTGGAGGTGAAGTAAAAATTCTAGATCATTCTGGTAGCACAACTACGTTAAGAATAGAACCCAGTAAAAATCAGCTGTCACCAATATTAATACATCAAAACCTGTCACCATCTAAACTCGGTAATGATGCTGAAGCAAGTAGTGTCGTAGTGAGATCCGGCTTACATTCCGGTGGAACGATAATGCATAATCCTCCTACGCCAAAAGAAGTATTGGGTACCCCACAACCCCAGACGCCTAGAATATCAATATCGACTGCCTCTTCTGTCCCGAATTCAAATTTGCCGAATATACATGATATGACTCACTTTCAATTTCCACCTCTCAGTGCTATTACAGCTTTTAATCCACTTACTTTACCACCACTAAGTCCTTCATCACCAAATGGTGCCACAACCATTTTCCATGGTGGAAAATTAATACCTCACGTGCCGGGTATACCTGGTCCTAATACACCGGGCATATTTGTTGGAAATTCAAATTCTCAGCCGAAGAATATGATAAACAGTGATATCAGTAGAACTTCTATGCAATCTAATCGCGATGATGTTCATGTTAATTCTTTAGTAAATATGCAATCTCCAAAAGGAACAATTATTAAATACGATGCACAACAATTACGTAACAGTAGTCCAAATTTGAGAACATCGAAAATTGAGCTCGAAGAACAAACACAAGACCATTACAGTATTGATGTTCCGCATTATGTTTCGGCTGTTCCTATAATAAAAATTAAGGACGTGGATGAATCAAATGCACTGAAATCATTTTCATCCAATTTAGTAAAATCAATTCACAGACAAGACGGAGCCGTAAAGAGAAATTTCGATGGCGTTCCTAGGACACCAGTTTTGAAAGAAAATACAAATTTTCCACCACAGAAACCAAAAAGTCGAGAAAAATTAAGTTCATCTAAAAATATGGAACCTAAATCAGAAAAAGAGTTACGTAATTTTAATTTTGAAAATGTAATAACAAAGGCTGAAATATATAATCATCAAATTCCTAGTTCCTCAGAAGTGCAAAAAAATAGTAACGCTCAAGAAACACCTACAATTTCAGTAAATAGTGAACGATCTGAAACATCTTACTTCCAAAAGAATGTGATACACAAACCTATCTCAGAAGATAGGAAACCAAAATTTTTGCGGCCGTCAACTTTACCTTTAAAACCAGGCACATTTACGCCTAAAAGGCACCACGGAATAACGCCAAATGCAAATACAATGCCACTTGTATCACCAGAGACTCCACGGCCCGCTAAAGCCTACGGTCAACTTTACCTAAATGGAAATGCTTATACGTATTTAGGATTAAAATGTTCAACAAAAGTTTTTTACTGCACGATCAATAGACCTCAACCAACATATGTTCCGAACCAGCACTTCTTATCAATGTATAGTAACTGGCAGTTATTATCAGAGTTGACGCCAGACCCTCTGGGATTGTCAACATCGTCTGCTATGTCTCTCTATGACTCACGTCATCGGCCACAAACTATAGCTATCGCTGCAATTAAACAGGATCTAGTATTGACTCATTCATCGCAGTGGAAAAGAATTGTAAAGGACAGCAAACAGACACTACAGTTGACTGATACGAAGAAAATGGACGAAAATAAATTTTCAGTATGTGACAGCGTATCCACTCCTAAAAAGGAATTGACTGGTGGATTTGAAAGTAATGAAGAATATACGTATGTTCGCGGCCGTGGTAGAGGACGTTATGTTTGCTCAGAATGTGGAATTCGTTGTAAGAAGCCTTCTATGCTAAAGAAACATATCCGCACTCACACCGACGTACGTCCGTTTACATGCGTGCATTGCGCTTTTAGTTTTAAGACCAAAGGCAACTTAACTAAACACATGAAAAGTAAAGCACATTATAAGAAGTGCTGCGAATTAGGAATAAATCCAAATGAAGGCAACGATGCTGAAGGTGGAGAAATGGCGCAATGCTCAGGTGAAACCGATGATGACACTGAATCGGAAGGTGATGAAGGAAATGAAGGAGAAACGGAATCTAGTGACACAGAAGCGTATAAATCGCGGTTACCAGAACATGAAGCTGCGCACTGCTTATTATCGCTAGGAGGATCTAGACCTACAACTTCGGCTACTCCAGGTTTAATAACTAGCGCTAGACCTTCAACTTATCCATATACACCAACGGGGCTGGAAAATATTAGTACAGAGAGTAATCAAGAAAGTTCAAATACTGCACGAAGTTCTCCCACAGACTCAAGACTGAGTACAGAAAACGAACCAATGGATCTCAGCAAAACTGATGTAAAAGCATCGCAAAATAATATTCCTGAAATACCAACTGCCAGAGAATCTAGTGTTTTAGCATCTTTAGCATCAAATACTGCTAAACTTCCATATCACCAAAGTCAGTGGACAAATGGAGAACCAATGTTGCATACATATTTGACTGAAAGAGCGCTGCAAGATTCGAAGATAAAGCAAAGCCAACTTGCAAGCAGTTTAAGTAAAGTAAGAAAAATTGATCTCGAAAAGTCTACGTTCACTGATAGTTACTGCTCCATGGATGGTCACAATAAAATTGTAACCTCTATTGTAAGTTCGTTAACGACTTCTGTGTCCTCGTCACGTATAATTTACAGCGAAGCAAAAATATCAGATAGCAATGACAGTGACAATGTGGTAAAATCATTAGCTATATTAAGAGATGAAGTTTCAGTAATCAGAGAACCACCAGTTTCAAGTAGTTTAGGGAGTGAGCCTAAAGGAAGCCACATACAAGCTCAAAGTAACGCAGAAAATGCCAAACATGTTGTATCTGAATATTTAAAACACGCAAGAATAAATCATATTCAAACACATGATGATAGTGTACAAAATCAAAATGATGATTCAAACGACGACATTTTGGTAATTCGTGAAGATATAAAGGCAGATGAACAATTTTCCGAATCCGAAACAGGAAAAGTAACGTCGTTGGAACATGAACCTGTTGCGAGAAAAGTTGTCATTGGTGCCGGAGGAGTAGCTTTTAAAGTAACGAAAGGGAAAGATTTTGAAAACACTTCCTATTCACCAGGAAGGTTAATGGAAGATGGTCGTAGAGTATGTGATTTTTGTAACAAGACATTTACTAAACCCTCGCAGTTGAGATTACATCTAAACATACATTACATGGAAAGGCCTTTTCGATGCAGTGTATGCGCCGTAAGCTTTAGAACTAGAGGACATCTACAAAAGCACGAACGTTCAGGTTCACATCACAACAAAGTCTCCATGACGTCGACATTTGGAGCTGCCACCTCCTTTAATCCTAGGCCATTTCGGTGTTCTGATTGCAATATAGCGTTCCGAATACACGGACACTTAGCTAAACATCTAAGAAGTAAAATGCATGTAATGCGTCTTGAATGTTTATTTAAATTGCCATTTGGAACATTCACGGAAATCGAACGCGCAGGTGTTAGTTTAACAGACATTGATACTACGGATTGTGCAAGTTCGCTTGCTAGTTTACAATCACTTGCACGAAAGCTTCACGAAAAGGATCCGACAAAACTCGAGTATCGGGAACCAAATGGCGCGACACTAACGGGTCCTGCTGGCAGGGAGTCATCAGAAGATGAAGATGCCGTTACATGTGAAAATATGAGTGAAAGTGAAAAAGATAGTGAAGGAAAGACTAATGAGAGTAATGAAGGTCAAGATAAAGACATGCGAGTTAATTATAGTGCCACAGATATTTAG
- Protein Sequence
- MPLTQEKRLDSNFSNNNDHSYLHKKFKKMASTMSAFPGNLPKTGETRHKETIVSSTACNLTISNGSIAAAHPEIEKIKIKADKQHLEVQDAEKNVQINYKIENSRLSHVNNIVQVTGQTSFTDEFSNKTENLENELIKEAYNGGLGGRYICPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHRRSRTHALRLQGADVSVTLNDDDLSGGSESDTSIPATSVSETGSDASIIRAENVESNDSSELIIDTSLPSTTMSFSLIDNSKSKSIYKPKFRAALYQESDEKDKVKKSISPNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQFMAELAEIKSEPTPLNLTKPNHDSENSFRKRSHSESFSQNDHQKHPLNPEGSIIKDLLLKTKLNGLTSVTGELIDGPIFICPLCQIIYRSADNLETHKMYYCKGSVNTNTISQKEMKSIRPENIFVRSNSINVRLPESPSNYSRSISTSKSSPSRIKPDNLIIMKPESNDVVAPLPSPGPLLGNTRLVDTRVPNDYARKNEGFKVKPIASPKRRIDNRADTYSPRLIENISPRSTDLYSQAKIRCIDANSTSLRTMDEMSQLMRHNSTSLQMFGGEVKILDHSGSTTTLRIEPSKNQLSPILIHQNLSPSKLGNDAEASSVVVRSGLHSGGTIMHNPPTPKEVLGTPQPQTPRISISTASSVPNSNLPNIHDMTHFQFPPLSAITAFNPLTLPPLSPSSPNGATTIFHGGKLIPHVPGIPGPNTPGIFVGNSNSQPKNMINSDISRTSMQSNRDDVHVNSLVNMQSPKGTIIKYDAQQLRNSSPNLRTSKIELEEQTQDHYSIDVPHYVSAVPIIKIKDVDESNALKSFSSNLVKSIHRQDGAVKRNFDGVPRTPVLKENTNFPPQKPKSREKLSSSKNMEPKSEKELRNFNFENVITKAEIYNHQIPSSSEVQKNSNAQETPTISVNSERSETSYFQKNVIHKPISEDRKPKFLRPSTLPLKPGTFTPKRHHGITPNANTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSTSSAMSLYDSRHRPQTIAIAAIKQDLVLTHSSQWKRIVKDSKQTLQLTDTKKMDENKFSVCDSVSTPKKELTGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCVHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGNDAEGGEMAQCSGETDDDTESEGDEGNEGETESSDTEAYKSRLPEHEAAHCLLSLGGSRPTTSATPGLITSARPSTYPYTPTGLENISTESNQESSNTARSSPTDSRLSTENEPMDLSKTDVKASQNNIPEIPTARESSVLASLASNTAKLPYHQSQWTNGEPMLHTYLTERALQDSKIKQSQLASSLSKVRKIDLEKSTFTDSYCSMDGHNKIVTSIVSSLTTSVSSSRIIYSEAKISDSNDSDNVVKSLAILRDEVSVIREPPVSSSLGSEPKGSHIQAQSNAENAKHVVSEYLKHARINHIQTHDDSVQNQNDDSNDDILVIREDIKADEQFSESETGKVTSLEHEPVARKVVIGAGGVAFKVTKGKDFENTSYSPGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHEKDPTKLEYREPNGATLTGPAGRESSEDEDAVTCENMSESEKDSEGKTNESNEGQDKDMRVNYSATDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042945;
- 90% Identity
- -
- 80% Identity
- -