Basic Information

Insect: Acronicta psi
Gene Symbol: ZIPIC
Assembly: GCA_946251945.1
Location: CAMIUM010000052.1:399986-409137[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.25 15 6.5 0.4 5 23 163 181 160 181 0.82

2 11 0.00029 0.018 15.7 0.9 1 23 187 209 187 210 0.95

3 11 0.00029 0.018 15.7 0.3 1 23 217 239 217 239 0.98

4 11 2.7e-06 0.00016 22.1 0.9 1 23 245 267 245 267 0.98

5 11 7.8e-06 0.00048 20.6 3.9 1 23 273 295 273 295 0.97

6 11 9.1e-06 0.00057 20.4 4.2 1 23 301 323 301 323 0.99

7 11 5e-06 0.00031 21.2 0.3 3 23 331 352 330 352 0.97

8 11 0.018 1.1 10.0 0.3 2 23 358 376 357 376 0.79

9 11 0.00025 0.016 15.9 3.2 1 22 382 403 382 405 0.91

10 11 0.022 1.4 9.7 0.4 1 23 411 436 411 436 0.94

11 11 0.093 5.8 7.8 5.2 1 22 442 463 442 463 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.25	15	6.5	0.4	5	23	163	181	160	181	0.82
2	11	0.00029	0.018	15.7	0.9	1	23	187	209	187	210	0.95
3	11	0.00029	0.018	15.7	0.3	1	23	217	239	217	239	0.98
4	11	2.7e-06	0.00016	22.1	0.9	1	23	245	267	245	267	0.98
5	11	7.8e-06	0.00048	20.6	3.9	1	23	273	295	273	295	0.97
6	11	9.1e-06	0.00057	20.4	4.2	1	23	301	323	301	323	0.99
7	11	5e-06	0.00031	21.2	0.3	3	23	331	352	330	352	0.97
8	11	0.018	1.1	10.0	0.3	2	23	358	376	357	376	0.79
9	11	0.00025	0.016	15.9	3.2	1	22	382	403	382	405	0.91
10	11	0.022	1.4	9.7	0.4	1	23	411	436	411	436	0.94
11	11	0.093	5.8	7.8	5.2	1	22	442	463	442	463	0.96

Sequence Information

Coding Sequence: ATGGAGTCTAAAATATGCCGTTTATGTCTCAACAAAACAGCAGCAATGTCCATATTTGATAAACAGAATGATATTCAGTTTAGCACTAAGGTGATGCGGTGTGTCAATGTGGTGGTGGTCGAGGGTGATGGGCTACCCGACAGCATATGTGTGTGCTGTGCGACTGAACTAACCGCAACGTACGAGTTCGTCAACAAATGCGAAGCTTCCGACAAGGCCCTTCGCTGTGCTAACATTACAGAACTGTTTAATGATTTCGTGCCAAAATCAGAATCTCAAATCAAACTAGAAAACATCAAGGTAGAAAATGGACCTGATGACCAAGATCATTTTGATCAGTTCCTACTAGAAAACCCCACAGACTCTTGTGATATCTATAATGTTAAGAATGTTAAAAGAAAATATAAAAAGTCAAAAAAAGTTAAGATGGATAAAAAAATGGATGGGAGGAAATTAAGGCCTAAAATGGGACCAGTCAGGTGTATTGTATGTGGTCTAATAGCATCATGTCAGTCTGCCCTAGAAAGTCATATGAGAACCCATACTGGGGAGAAACCTTTTGCTTGTGACTCCTGTGATGCACGGTTTAACATTAAAGGCTCTCTCAAAAGACATATAATTACACATCATACCCAAAGAGAACGTAAATTCATTTGTGAGACCTGTGGGAACAGCTTTTTCACTAAGAATGACATCATTACACACATTAGAGTTCATACTGATGAAAGACCATATTCTTGTACATACTGTGGGAAGGCATTTAGACAGATAGCTTCAATGATACGCCACAAACGCATGCACACTGGTGAAAGGCCTTTTTCATGCCCGATCTGTTTTAAAAAATTCACAGACAAAAGTCATATGATGAGACACCAGTATGTGCACACGGATGAGAAGAACTTCACTTGTCACTTGTGCAGCAAATCTGTAAAAACTAGAAATGCACTTAAAACTCATATGAGAACACATTCTAATGAAAAGCATAACATTTGCAGCTACTGTGGCATGACATTCTCTCTGAAGGGTAATCTTCAGGTTCATATAAAAAGGATACACTCAGAGAAATCTGGCCAGTGCAATGTCTGTTTGAAAACATTCCCAGATTTAGAGGCTCACATGCGCAAACACACAGGAGAGAAACCGTTTGTGTGCAAGCTTTGTGATCAATGTTTTGCAAGTAAAAGAAGTTTGTCTAACCACATGGGTTTTAAGCATGAGAATGCATCAAAGTTTAAGTGTTCTATAGGAGAATGTACTAAAACATTCCCAACTGCAATGATGCTGGAGTTCCACCTTCTCAAGCAGCACACCAACCACACTCCATACATTTGCCATCATTGCTGCAGAGGGTTTTTCAGGATGAGTGATTTGTCTCGACATCTTAGGTCGTTGCTAAAAGAGGATCCTCTCTCCAGGATCCAGCGAGAGATCATAGAAGTAACTGAAAGAGAAAGAGAGTTCAAGGAGGGGCATTTTCGTATAAATCGTCTGATGTCAGAGTCCACTATCGACGTGAACCACCAGAACGGGCATGTGAACGGTGACAGCGACCTCAAACCGCAGAAGACCCTCAACAGAGCCGTGTCTACCTCGCACCTACTCGGCCCGATCGCACCCTCGCCCCCAATCACACCCTCACTACTCAACACAAATGGATACACGCGCCGCTTCACACCCCAAACGGGAACAAAAGGAATCATGCAGCGATTTATCGCCAACAAAGGCAAGTTGCCCAACACTCCAGGTGGTGGACCCATACCCTCCACACCTACTACGCCTCTGGCGGCACCCCTCGTGTTCCCTACGTCGCCAGTAATCGCGCCTGTGGTGTCACCTCCTATCATCACCCGTACCCCAGAAGGCAAGCCTGTTAGAAAGGGATATGTACCCGTTGAGGAAAAAATACAGAAAGAATTACAAGAAATGAAAGACAGGGAACACGAACTGAAGAAAATGAGGAAGAAGCAAAAGCCATATGACTTGGAGTTGAGCGACACCGAGACCACCTCCGAGTCTGAAGACGAAGAGATCCCTATGCCCGGCAAACTGAAGGCCACCAAGTCGATAGGTGAGCTTTACGAGGCTCTCAACGAGGAGCTACGGTCGCCATCGCCACGAAATAGCTCTGGACACGACTCCATTGGCAGTTTAAAGCCAGCCAAGTCGTTGGCGGAGTTGTGCACGCTTGCCCCGGGAGAAGAGTTCCTCGCGCCCAGCTCCACGCGACTGATAGCCAAGTGGGAGTCTCTCATACAACAAAAACAGGAAGCCGGCGCCGCTTAG
Protein Sequence: MESKICRLCLNKTAAMSIFDKQNDIQFSTKVMRCVNVVVVEGDGLPDSICVCCATELTATYEFVNKCEASDKALRCANITELFNDFVPKSESQIKLENIKVENGPDDQDHFDQFLLENPTDSCDIYNVKNVKRKYKKSKKVKMDKKMDGRKLRPKMGPVRCIVCGLIASCQSALESHMRTHTGEKPFACDSCDARFNIKGSLKRHIITHHTQRERKFICETCGNSFFTKNDIITHIRVHTDERPYSCTYCGKAFRQIASMIRHKRMHTGERPFSCPICFKKFTDKSHMMRHQYVHTDEKNFTCHLCSKSVKTRNALKTHMRTHSNEKHNICSYCGMTFSLKGNLQVHIKRIHSEKSGQCNVCLKTFPDLEAHMRKHTGEKPFVCKLCDQCFASKRSLSNHMGFKHENASKFKCSIGECTKTFPTAMMLEFHLLKQHTNHTPYICHHCCRGFFRMSDLSRHLRSLLKEDPLSRIQREIIEVTEREREFKEGHFRINRLMSESTIDVNHQNGHVNGDSDLKPQKTLNRAVSTSHLLGPIAPSPPITPSLLNTNGYTRRFTPQTGTKGIMQRFIANKGKLPNTPGGGPIPSTPTTPLAAPLVFPTSPVIAPVVSPPIITRTPEGKPVRKGYVPVEEKIQKELQEMKDREHELKKMRKKQKPYDLELSDTETTSESEDEEIPMPGKLKATKSIGELYEALNEELRSPSPRNSSGHDSIGSLKPAKSLAELCTLAPGEEFLAPSSTRLIAKWESLIQQKQEAGAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00450373;
90% Identity: iTF_00450373;
80% Identity: -