Basic Information

Insect: Acronicta psi
Gene Symbol: ham
Assembly: GCA_946251945.1
Location: CAMIUM010000004.1:795823-833112[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.23 14 6.6 0.0 2 23 287 309 286 309 0.95

2 9 0.00096 0.059 14.0 0.8 1 23 316 339 316 339 0.93

3 9 2e-08 1.3e-06 28.8 0.1 1 23 345 368 345 368 0.96

4 9 1.7e-06 0.00011 22.7 1.7 1 23 374 396 374 396 0.95

5 9 6.2e-05 0.0038 17.8 6.1 1 23 402 424 402 424 0.99

6 9 0.00021 0.013 16.1 0.4 2 21 432 451 431 452 0.94

7 9 1.5e-08 9.2e-07 29.2 0.7 1 23 850 872 850 872 0.98

8 9 5.4e-07 3.3e-05 24.3 1.7 1 23 878 901 878 901 0.97

9 9 2e-05 0.0012 19.3 3.2 1 23 907 929 907 929 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.23	14	6.6	0.0	2	23	287	309	286	309	0.95
2	9	0.00096	0.059	14.0	0.8	1	23	316	339	316	339	0.93
3	9	2e-08	1.3e-06	28.8	0.1	1	23	345	368	345	368	0.96
4	9	1.7e-06	0.00011	22.7	1.7	1	23	374	396	374	396	0.95
5	9	6.2e-05	0.0038	17.8	6.1	1	23	402	424	402	424	0.99
6	9	0.00021	0.013	16.1	0.4	2	21	432	451	431	452	0.94
7	9	1.5e-08	9.2e-07	29.2	0.7	1	23	850	872	850	872	0.98
8	9	5.4e-07	3.3e-05	24.3	1.7	1	23	878	901	878	901	0.97
9	9	2e-05	0.0012	19.3	3.2	1	23	907	929	907	929	0.98

Sequence Information

Coding Sequence: ATGAAGATGTCTGCAGCAGACAGTCAGGAGTCTGGCAGCCCACCGCCGAGCCCGACTGACTCTGCCACATCAGAATCAGCGCCCACCCTAGTTCACATCAAGCAAGAGAACATGCCGCCTGGAACTGACATCAAAGAATACTACGGAACATTAGATTTCGACCTCTCCAGTACATACCTAGCCTCCAACTTCCCTGACTATGGACGAGGGTACTTACCAAGACCTTTAGATTTACCACTGCATCAAAGGTATGACCCAAAGAGTCCGAAGGAAAAAGAGGATGGAACGAAAGATGACGATCCCGGGGAAAGAGATTATAATTTACCTAATGAGCTGATCTTCAAAAGTGGAGGGATATTTGCCAGGGTGAATATTGCCAATGGAACTCAATATGGACCATTTCTTGGGCTGTGGGAGAGTCAGCCTAAAGACAGGAGATTTGCTTGGGAGGTACGCCATAAGACCGGTGCCGGTCGCTGGTTAGATGGCACCTCCGAGAAGAGTAACTGGCTCAAACTGGTGCGCTCCACCAACTACCCACACGACGTCAATGTGCAACACCTCTTGTTGGCTGGCCAAGTGTGGTACAAAGTGGTGCGTGAGGTGCCATCCGGACAGGAGTTGCTGCTGGGCCCCCGGACACCTCTCTACTCGGACGATCTGCTTTCTCTAGACCTAAGGACCGTATGCGACCCGGTGCGGGTCTTCAGTGCTTCCTGTAACGGCTTCCGGCGCGGCGTCGCAGCCGGCACGGTGCCGGTGATTTATGCGATTCCAATTGCACAGCATCAGCCTTCAGTTGAGAAGTTCAGCTCACAGGCTGCCGCCGATGACGACGAGCGAGAGGACGCTGAGATCCGCTGCAGTTTTTGCGACCTGCCCTTCCCAAATATTGATGTTCTCGATCTCCACTTGATAACGGAACACGCTCAGCCAGCCGCGGCATTTCACTGCGAACTTTGTAACAGGGCTTACAGCACTCGCGTCCTGCTCCTGCGACACCGGGCGCTTGCGCATACAGACATCAGAAAGTATCCCTGCGAGAACTGTCCTAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATTCGCGCGCAACACGCTGGTGCCCGCAGCCACGCGTGCCCCGAGTGCGGCAAGACGTTCGCCACCTCCTCCGGTCTCAAGCAACACACGCACATACACTCCAGCGTCAAGCCGTTCCAGTGCAAAGTCTGCTTTAAGGCTTACACCCAGTTCTCCAACCTCTGTCGCCACAAGCGGATGCACGTCGCCTGCAGAGCACTAATTGAATGCGTAAAATGCGGCCAATCCTTCACGTCTTACGCCTCTCTTACTAAACACAAGAGATTCTGCGACACCGCAACTGCCGCTTCAGTCAACCTTCGAGGACAAATGCCCCAGGGTTTACCACAAATAGCGTCACTACAAAACGTCGGAATGAATACCCCAAACAATACGAACCCATTCCCGATGTACAGAGGACATACTCTGCCTCTCCCGTACAGTACATTTGCTCACTACCCAGCTTTATTCTCTGCCGCTGCTGCTGCAGCTTGCCCGCCCGAGTTCTTAAGTCCATTGCTCTTCAATGTGCAAGGGGCGAGACTTGCAATGGAACATGATATGGCCATGTCAAACGCCAATTTAGTATCCAAACAACAGGAAGGCCGCCTATCAGTAAAAAGCATGGATAGCTCAAACTCTTTAGAGGATAAGAAGTCTAAGGATATGGATTTCGAAATCAAAAGAGAAAACTACAGCTCTGACAGGGCCACGCCCAATAAATTGCATGGTCTTTACTCCAAGCAATCACCTCCAGGTGATTCAGGTGAAGAAGCAACTTCTCAACAGCGACCATCACCAGTGATGCCACTGCCCACACCTATTGTTCCATTTAATTTCCCAAGAGACGAGTTGAAACGGAAGTCACCCTATAATTTCTCTCTCAAGCTCAATAATAATGACATTCAGGGCAATAAATCTGATTCACCACTACCAAAAGATTTGTCCAAGAATGTTATTGAAGATGATAAGAATTCCGAATATTCTGATGTCGAGGATGACACAAAGAAAGATGAGGGTGATCAGCCTTTGGATTTATCAGTGTCAAGGAAACAGAATGATAAAGATTCCGAAGCTGACAATGATGATCGTTCCTTCCGCAACTCAGTTAAGTCTTATTCACCACCTGAAAGTCCAGCTGCGAGGAGTAAGACCCCTGAAAACGACACTACAGATGTTGACGTAGAAGGCGTAGAACCTAAGAGAGAAGATTCACCACCGCAACTTGTATCACCACCTCTTGCATTCCCCATGCCTGTTCATCCGCAACACAGTAACATTATTGATGCTATGTACCGGCCCCGATTTCCGTCATTTCACTCTACTGAATCGATGCTGAACTCATCGCACTCTCCGTACGTTCCAAGTCCGTTCAATTTTTTATCCCCACTTCTCGGTACTGATGGACCTGACAGGCAACCTAGTGCGTACGCCAAGTTTCAAGAGCTAAGTGCTGGGTCTGGTAAGTTGCGTGACCGGTACGCTTGTAAGTTCTGTGGGAAAGTCTTCCCTCGGAGTGCGAACCTAACCAGACATTTACGCACACACACGGGAGAGCAACCGTACAAGTGTAAGTACTGCGAGCGGTCATTCTCCATCTCGTCAAACCTTCAACGGCACGTGAGGAATATTCACAATAAGGAGAGGCCATTTCGATGTCCTTTATGTGAAAGATGTTTCGGGCAGCAGACAAATCTCGATCGTCACTTGAAGAAGCATGAGGCGGAAGGTGGAGATTCACCAAGCTCTGCTGATACGGAGAGGGAGGATGCGTATTTCGATGACATTCGGTCGTTCATGGGCAAGGTGACGTGTTCCCCGGGCGCGCGCTCCCCGGCGGCGACGCCCCCGCACGGTGCACACGCCGCGCACGGCCCGCGTCCGTCACTTGCCATATCCACATAG
Protein Sequence: MKMSAADSQESGSPPPSPTDSATSESAPTLVHIKQENMPPGTDIKEYYGTLDFDLSSTYLASNFPDYGRGYLPRPLDLPLHQRYDPKSPKEKEDGTKDDDPGERDYNLPNELIFKSGGIFARVNIANGTQYGPFLGLWESQPKDRRFAWEVRHKTGAGRWLDGTSEKSNWLKLVRSTNYPHDVNVQHLLLAGQVWYKVVREVPSGQELLLGPRTPLYSDDLLSLDLRTVCDPVRVFSASCNGFRRGVAAGTVPVIYAIPIAQHQPSVEKFSSQAAADDDEREDAEIRCSFCDLPFPNIDVLDLHLITEHAQPAAAFHCELCNRAYSTRVLLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAQHAGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKAYTQFSNLCRHKRMHVACRALIECVKCGQSFTSYASLTKHKRFCDTATAASVNLRGQMPQGLPQIASLQNVGMNTPNNTNPFPMYRGHTLPLPYSTFAHYPALFSAAAAAACPPEFLSPLLFNVQGARLAMEHDMAMSNANLVSKQQEGRLSVKSMDSSNSLEDKKSKDMDFEIKRENYSSDRATPNKLHGLYSKQSPPGDSGEEATSQQRPSPVMPLPTPIVPFNFPRDELKRKSPYNFSLKLNNNDIQGNKSDSPLPKDLSKNVIEDDKNSEYSDVEDDTKKDEGDQPLDLSVSRKQNDKDSEADNDDRSFRNSVKSYSPPESPAARSKTPENDTTDVDVEGVEPKREDSPPQLVSPPLAFPMPVHPQHSNIIDAMYRPRFPSFHSTESMLNSSHSPYVPSPFNFLSPLLGTDGPDRQPSAYAKFQELSAGSGKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCERCFGQQTNLDRHLKKHEAEGGDSPSSADTEREDAYFDDIRSFMGKVTCSPGARSPAATPPHGAHAAHGPRPSLAIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00441779;
90% Identity: iTF_00017548; iTF_00383924; iTF_01377718;
80% Identity: -