Basic Information

Insect: Acronicta psi
Gene Symbol: -
Assembly: GCA_946251945.1
Location: CAMIUM010000039.1:311218-325917[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.1e-05 0.005 17.4 2.2 1 23 428 450 428 450 0.97

2 20 0.0042 0.26 12.0 0.6 1 20 456 475 456 478 0.94

3 20 2.1e-05 0.0013 19.3 5.6 1 23 497 519 497 519 0.98

4 20 9.9e-05 0.0061 17.2 4.1 1 23 525 547 525 547 0.99

5 20 3.8e-05 0.0023 18.5 5.3 1 23 553 575 553 575 0.97

6 20 8.6e-06 0.00053 20.5 7.4 1 23 581 603 581 603 0.97

7 20 7.3e-07 4.5e-05 23.9 2.9 1 23 609 631 609 631 0.97

8 20 0.0001 0.0064 17.1 6.7 1 23 637 659 637 659 0.97

9 20 0.0001 0.0063 17.1 6.5 1 23 665 687 665 687 0.97

10 20 4.9e-07 3.1e-05 24.4 1.9 1 23 693 715 693 715 0.98

11 20 5e-05 0.0031 18.1 7.9 1 23 721 743 721 743 0.98

12 20 2.6e-05 0.0016 19.0 6.6 1 23 749 771 749 771 0.98

13 20 2e-06 0.00012 22.5 4.2 1 23 777 799 777 799 0.98

14 20 9.3e-06 0.00057 20.4 6.0 1 23 805 827 805 827 0.97

15 20 0.00011 0.007 17.0 7.3 1 23 833 855 833 855 0.97

16 20 3.1e-06 0.00019 21.9 6.0 1 23 861 883 861 883 0.98

17 20 6e-05 0.0037 17.8 7.9 1 23 889 911 889 911 0.97

18 20 2.5e-05 0.0015 19.0 7.7 1 23 917 939 917 939 0.98

19 20 0.00074 0.046 14.4 0.3 1 23 946 968 946 968 0.96

20 20 0.47 29 5.6 5.3 1 23 979 1001 979 1001 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.1e-05	0.005	17.4	2.2	1	23	428	450	428	450	0.97
2	20	0.0042	0.26	12.0	0.6	1	20	456	475	456	478	0.94
3	20	2.1e-05	0.0013	19.3	5.6	1	23	497	519	497	519	0.98
4	20	9.9e-05	0.0061	17.2	4.1	1	23	525	547	525	547	0.99
5	20	3.8e-05	0.0023	18.5	5.3	1	23	553	575	553	575	0.97
6	20	8.6e-06	0.00053	20.5	7.4	1	23	581	603	581	603	0.97
7	20	7.3e-07	4.5e-05	23.9	2.9	1	23	609	631	609	631	0.97
8	20	0.0001	0.0064	17.1	6.7	1	23	637	659	637	659	0.97
9	20	0.0001	0.0063	17.1	6.5	1	23	665	687	665	687	0.97
10	20	4.9e-07	3.1e-05	24.4	1.9	1	23	693	715	693	715	0.98
11	20	5e-05	0.0031	18.1	7.9	1	23	721	743	721	743	0.98
12	20	2.6e-05	0.0016	19.0	6.6	1	23	749	771	749	771	0.98
13	20	2e-06	0.00012	22.5	4.2	1	23	777	799	777	799	0.98
14	20	9.3e-06	0.00057	20.4	6.0	1	23	805	827	805	827	0.97
15	20	0.00011	0.007	17.0	7.3	1	23	833	855	833	855	0.97
16	20	3.1e-06	0.00019	21.9	6.0	1	23	861	883	861	883	0.98
17	20	6e-05	0.0037	17.8	7.9	1	23	889	911	889	911	0.97
18	20	2.5e-05	0.0015	19.0	7.7	1	23	917	939	917	939	0.98
19	20	0.00074	0.046	14.4	0.3	1	23	946	968	946	968	0.96
20	20	0.47	29	5.6	5.3	1	23	979	1001	979	1001	0.98

Sequence Information

Coding Sequence: ATGAATCCAGAGCACCATAATATGAACACGGGTGGTGGCCAGCCTCCTGGAAGTTCTGAGTCACAGGGCCAAAGAGTTCAGGCCGCACAGCAGCAGCAGCAGAATAATTTGCCTGCCACGACATCTGCTACTGATCTGCGTGTGAACTCGGCGGCAGTAAACGTCGCTTTGTCTAGTGTCGCAAAATATTGGGTATTTACAAATTTATTCCCCGGGCCAATACCGCAAGTGTCTGTATACGGATTGCCTGCCGGTGCTAGGATTGAAAACGGAAAACCTGTTCAGGATCTTGGCCAAGCTCATGCCAGCATACTGAATGGAGATCCTAATATTATACTTGGCCATCATGCAGGCCAGTCCCAAGTCACAGTATCTGCTGGTGGCCAGCAGATACCTGTCTCACAGATCATTGCTACACAGTCTGGACAAAGCCATGAAGCCCTTGTGGCCCATAGTCAGCAGGCCGAACTGGTGGCTGCTCAAGGCTCCGGTAACAATCAGGTGTCAGTTAGTGCCAGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGCCACCATTCACAACAACAACACATAATGCAACAACAACTTATGGCTGCGGCGCGACCCGAGCATAGCAACCAACAGATTCAACTGACTGTGAGTGAAGACGGCATAGTGACGGTGGTGGAGCCCGCGGGTACTAAGATGGTGGACAAAGAAGAACTGCATGAAGCCATCAAGATGCCCAACGACCATACCCTTACAGTGCATCAACTGCAGCAGATTGTGGGACAACAGGTGATAGACAGCGTAGTACGTATAGAACAAGCGACCGGCGAACCGGCCAATATCCTAGTGACCCATAATCCTGACGGCACCACCTCCATAGAGGCCAGCGCCAGCGACCCTCTGATCAAAGACGAGAAGGTAGTCAACAAGATAGAGTCTGCGCAGTTCGCATTACCCGCCGAGATAAAAGATATCAAAGGGATAGACTTAAAGAGTGTAGGGGCCATGGGAATGGAGGGTGCTGTAGTGAAGATCTCAGCCGCCGCTTCGGAACATGACCTCCACGCAATGTATAAGGTCAATGTAGAAGATCTATCGCAATTGCTTGCCTACCATGAAGTATTCGGAAAACTTAATTCAGAAGGACAGCAACAGCAAGCAAAGGCTATAAACGACGTGGAGGCAGAAGTAGAAGCGGGAACCAGCGCCGCCATGTCAGAAGCCGATTCCTCACCCGGCCATCACTCCTGTGACATTTGCGGGAAAATATTCCAGTTTCGATATCAACTTATTGTTCATAGGCGCTATCACGGCGAAAGTAAACCATTCACGTGTCAAGTTTGCGGTTCCGCGTTCGCCAATCCTGTTGAACTATCGAGACATGGAAAATGCCATCTTGCTGGTGATCCGAACGAAAGACACGCCAAAAGGATGTCGCAAGATAAGCCATACGCCTGCACAACTTGCCACAAGACATTCTCCCGCAAGGAACATTTGGACAATCATGTTCGAAGTCATACTGGGGAGACGCCGTACAGATGCGAATTCTGCGCGAAGACTTTCACCCGTAAAGAGCACATGGTGAACCACGTGCGGAAACACACGGGCGAAACTCCGCATCGATGCGACATTTGCAAGAAAAGTTTCACTAGAAAAGAGCACTTCATGAATCACGTCATGTGGCACACAGGTGAAACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCCCATACAAATGATACTCCATTCCGATGTGAACTGTGCGGCAAGTCGTTCACAAGAAAGGAACACTTCACCAATCACATACTGTGGCATACTGGCGAGACTCCCCACCGCTGTGACTTCTGTTCCAAGACTTTTACTCGTAAGGAGCACCTTCTGAACCACGTCCGACAGCACACTGGCGAGTCGCCTCATCGATGCAACTTCTGCAGCAAGTCTTTTACGCGACGAGAACATCTTGTGAATCATGTGCGACAACACACTGGAGAGACACCCTTCCAGTGTGGATATTGCCCTAAAGCCTTCACAAGGAAGGACCACCTTGTGAACCACGTCCGGCAGCATACTGGTGAATCCCCACACAAATGCTCGTTCTGCACAAAATCATTCACTCGTAAGGAGCACCTGACAAACCATGTGCGGCAACACACCGGCGAATCGCCGCATCGGTGTACGTACTGCGCTAAATCTTTCACGAGGAAGGAACATCTTACCAACCATGTCAGACAGCACACGGGAGAAACACCACACAAGTGTACGTACTGCCCGCGGGCCTTCGCGCGCAAGGAACATCTCAACAACCACATCCGCCAACACACCGGAATCACGCCGCACTCCTGCTCCTACTGTAACAAGAGTTTCACCAGGAAAGAACATCTCGTTAACCATGTTCGGCAACACACGGGCGAGACTCCTTTTAAGTGTACGTTCTGTTCAAAGTCGTTCTCTCGTAAGGAGCACCTCACGAACCATGTGCACCTCCATACGGGGGAGACGCCGCACAAATGTCCCTTCTGCACGAAAACTTTCTCCAGAAAAGAACATTTGACCAACCATGTCAGAATTCACACGGGTGAGTCTCCGCACCGGTGCGACTTCTGCCAAAAGACGTTCACTCGTAAGGAGCACTTGACGAACCACTTGAAGCAACACACCGGTGATACCGCGCATGTCTGCAAAGTGTGCTCCAAACACTTCACTAGGAAAGAACATTTAGTTACGCATATGAGGTCACACAGTTGTGGGGAGCGTCCATTTAGTTGCGGCGAGTGTGGCAAGTCTTTCCCATTGAAAGGCAACCTGTTGTTCCACGAACGATCACACAACAAGAACAACGCAAATGCGAACAAACCATTCCGGTGTGAAGTCTGCTCTAAAGAGTTTCTCTGTAAAGGACATTTGGTAACCCATCGGCGCACACACACGGAGGGCGCTGAAGCTGCAACGACCGGTGAGGCGCCCGCCGAGAATGAAGACTGTAAAGACTGCAACAAGTGCATCAAAGTCGAACCCAACCGAACTGAGAGGAAACATGAAATCAGGACTTCACTGGAAACTAGACCAGTTGAAAACAATGTCGCACAAACTCAACCAAACACTGCTACTGTGATGATAACTAATAATCAGCATGTCCGTGCGGCGGGCGTGGGGGGCGTGGGGGGCGTGGGCGGCGCGGGCGGCGGCGCGGCAGTGGGCGCGGGCGCGGCCGGCTCGTTCCCGCACGCGGTGGGCGCGCAGCACCACGCGGGCGCCGCGCTGGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNPEHHNMNTGGGQPPGSSESQGQRVQAAQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAGGQQIPVSQIIATQSGQSHEALVAHSQQAELVAAQGSGNNQVSVSASQATHQQVPNNRVEFVQHHNIDMVNHVGHHSQQQHIMQQQLMAAARPEHSNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASASDPLIKDEKVVNKIESAQFALPAEIKDIKGIDLKSVGAMGMEGAVVKISAAASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQQAKAINDVEAEVEAGTSAAMSEADSSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMSQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGITPHSCSYCNKSFTRKEHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNNANANKPFRCEVCSKEFLCKGHLVTHRRTHTEGAEAATTGEAPAENEDCKDCNKCIKVEPNRTERKHEIRTSLETRPVENNVAQTQPNTATVMITNNQHVRAAGVGGVGGVGGAGGGAAVGAGAAGSFPHAVGAQHHAGAALAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -