Alep000176.1
Basic Information
- Insect
- Acronicta leporina
- Gene Symbol
- ZNF700
- Assembly
- GCA_947256265.1
- Location
- OX366519.1:2912142-2920821[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0033 0.26 12.3 0.6 1 23 271 293 271 293 0.99 2 25 0.016 1.2 10.2 6.7 1 23 300 323 300 323 0.97 3 25 4.2e-05 0.0033 18.2 0.2 1 23 354 377 354 377 0.98 4 25 0.0097 0.75 10.8 0.1 2 23 386 408 385 408 0.94 5 25 0.0075 0.58 11.1 0.1 2 20 419 437 419 439 0.95 6 25 4.4e-05 0.0034 18.2 0.5 3 23 449 469 449 469 0.99 7 25 1.1 88 4.3 0.1 3 23 486 507 485 507 0.93 8 25 3.8e-05 0.0029 18.4 4.3 1 23 524 546 524 546 0.98 9 25 0.76 58 4.8 0.1 1 11 552 562 552 565 0.91 10 25 9.2 7.1e+02 1.4 0.2 11 23 572 584 570 584 0.86 11 25 0.76 58 4.8 0.1 1 11 590 600 590 603 0.91 12 25 9.2 7.1e+02 1.4 0.2 11 23 610 622 608 622 0.86 13 25 0.76 58 4.8 0.1 1 11 628 638 628 641 0.91 14 25 9.2 7.1e+02 1.4 0.2 11 23 648 660 646 660 0.86 15 25 0.76 58 4.8 0.1 1 11 666 676 666 679 0.91 16 25 9.2 7.1e+02 1.4 0.2 11 23 686 698 684 698 0.86 17 25 0.76 58 4.8 0.1 1 11 704 714 704 717 0.91 18 25 9.2 7.1e+02 1.4 0.2 11 23 724 736 722 736 0.86 19 25 0.76 58 4.8 0.1 1 11 742 752 742 755 0.91 20 25 9.2 7.1e+02 1.4 0.2 11 23 762 774 760 774 0.86 21 25 0.76 58 4.8 0.1 1 11 780 790 780 793 0.91 22 25 9.2 7.1e+02 1.4 0.2 11 23 800 812 798 812 0.86 23 25 0.0039 0.3 12.1 0.0 1 23 818 840 818 840 0.96 24 25 0.00084 0.065 14.1 3.5 1 23 846 868 846 868 0.96 25 25 0.0022 0.17 12.8 4.2 1 23 874 897 874 897 0.96
Sequence Information
- Coding Sequence
- ATGGAAGACCCTAAATATTGTAGGGTATGTCTTGTGACAGATGTGAAGATGTTTAGCTTGGACGCTACGTCCAGCGACTCAATGGGCGTAGTTTATTCAAACTTAGCTCAGATTCCGATCTTTGATAGGAATCAGCATGTGTGTTATGTATGTGCAAGCCTTCTCCAAAAGTATCAAGAGTTCAAGTCAAAATGTCTCAGGGCCCACAACATTATTTCTAGAATACAAGTTGGTTCAAAACAGATTACAGAACAGGCAATCCGGAGCATAGATAGGAAATTAAATAAATTAGAATGTAGTTTAATACTTTCTCCAGTGGCTCTGTTTTGTGATGAGTCTTTGAATAACACAGAAATAAATAAGACTGAATGCAAAGAGTTTAAAGAAAATAAAGAATTAGAAATTAATGTAAAGATTGAAGATGTAAATAAAATTGATTCAAATGAAAATCATGATTTAAATGATGATGTCAATGAATTCAATGGAGATGATTTTACTAATTCATCAGAAGAGAATTTGACAATAAATGTTTTAAAGACGAAACATAAAAAACCTAATCAAAACAAAGAACCAAAAACGAAGAAAAGAAAATATAAAACTGTAGACAAAAGTGAGGATGATTTAAGTGATAATGAACCATTGTCTAAGAGTGTCACGAAAACATTAGCAGTGAAGAAGACAGATAAAAAAAAGTATGGTCTAAACATTAGTTACTTTGATGATTATGCAACAGTTGTGTTTCTTACCCCTGAAGATGCAAGAAAGGAGGTATTGCTGCGAAAAGAGTCTAGTAATTATAAAAAGTCTCCTTTTAAGTGTGATTTGTGTTATAGAGGATATGAAGCCAAAGCTGCATTTGAAAATCATATGAAAAAACATAGTCTTGAATATGGTAGCTATGAATGTGACCTTTGCCACCTAAGGTTCCCCCAGCAAATATACTTGTGTAAGCATAGGCTTTCATGTCACAAACGAAAGTTTAGCTGTAAACTGTGCCCATACATATGCTACTGTACTTATCAAGCAAAAACACATGTCAGCTTACACAAAGGGAAGAAATACCCTTGTAAAGACTGTGGAGAAATATTCAGCATGCCAAACAGTTTACTGATGCACAAGCGTATGAAGCATTTAAAGGAGGCGGTGCGTGAGTCTGTCTGTGAATATTGCGGTAGTACTTTCGGCACACCGCGGGGACTCTTCTTACATAACATGAAGGTGCATAGGCAGGATAAGAATGACAAGTTAGGACCTAAGTGTGATGAATGCGGTGTACATTTCACTTCCGAAGTGGCCTGGAAGAGGCACTTAGTGCTTTCATCAAAGCATAAAGTTAGTAACGGCTGTAAATACTGTGGGGACACATTTTCCAATATAGAGGATCTGAAATCTCACATGAGAGTGCACTCCCGGAAACACATAAACAGATGTGACAGTGTCAAACTACCCGCGGCCTGCGTTATTTGTGACAAATGGTTATCAAACCGCGCTGAGTACAAGATCCACGTGACGTCAGAACACCCACACACTGACGAAGCGAAGAAGTTTAAGGATGACGACCAGACACCGTTCGTGTGCGAAATTTGTGGGCAAATGTTTAAGCAACAGTGCTTCCTGCGCTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACTCGTGCGCGTCGTGCGGCAAGTCGTTCCCGCTGGCGGCGTGCGCGGGTGATGTAGTGACTCAACAGTGCTTCCTGCGCTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACTCGTGCGCGTCGTGCGGCAAGTCGTTCCCGCTGGCGGCGTGCGCGGGTGATGTAGTGACTCAACAGTGCTTCCTGCGCTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACTCGTGCGCGTCGTGCGGCAAGTCGTTCCCGCTGGCGGCGTGCGCGGGTGATGTAGTGACTCAACAGTGCTTCCTGCGCTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACTCGTGCGCGTCGTGCGGCAAGTCGTTCCCGCTGGCGGCGTGCGCGGGTGATGTAGTGACTCAACAGTGCTTCCTGCGCTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACTCGTGCGCGTCGTGCGGCAAGTCGTTCCCGCTGGCGGCGTGCGCGGGTGATGTAGTGACTCAACAGTGCTTCCTGCGCTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACTCGTGCGCGTCGTGCGGCAAGTCGTTCCCGCTGGCGGCGTGCGCGGGTGATGTAGTGACTCAACAGTGCTTCCTGCGCTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACTCGTGCGCGTCGTGCGGCAAGTCGTTCCCGCTGGCGGCGTGCGCGGGTGATGTAGTGACTCAACAGTGCTTCCTGCGCTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACTCGTGCGCGTCGTGCGGCAAGTCGTTCCCGCTGGCGGGCGCGCTGGCCTCGCACGCCGCGGTGCACGCGCGCCGGCGCCCGCACGCGTGCCACATGTGCGCCAGGCTCTTCACCTTCAAGAGCGCCCTCAACAAACATATCAAGATACACCTCGGCATCCGTCCCCACAAGTGTGCGATTTGCGACAAAGGCTTCATCCACATGTGCGACTTGAAGTTGCACATCAAATACGTACACGACAAAGTGCCGTGGCCTAAGAAAAAGAATAAGCGGAATATCGGCGAAGACACCCAATATTTAGAATACAACTGA
- Protein Sequence
- MEDPKYCRVCLVTDVKMFSLDATSSDSMGVVYSNLAQIPIFDRNQHVCYVCASLLQKYQEFKSKCLRAHNIISRIQVGSKQITEQAIRSIDRKLNKLECSLILSPVALFCDESLNNTEINKTECKEFKENKELEINVKIEDVNKIDSNENHDLNDDVNEFNGDDFTNSSEENLTINVLKTKHKKPNQNKEPKTKKRKYKTVDKSEDDLSDNEPLSKSVTKTLAVKKTDKKKYGLNISYFDDYATVVFLTPEDARKEVLLRKESSNYKKSPFKCDLCYRGYEAKAAFENHMKKHSLEYGSYECDLCHLRFPQQIYLCKHRLSCHKRKFSCKLCPYICYCTYQAKTHVSLHKGKKYPCKDCGEIFSMPNSLLMHKRMKHLKEAVRESVCEYCGSTFGTPRGLFLHNMKVHRQDKNDKLGPKCDECGVHFTSEVAWKRHLVLSSKHKVSNGCKYCGDTFSNIEDLKSHMRVHSRKHINRCDSVKLPAACVICDKWLSNRAEYKIHVTSEHPHTDEAKKFKDDDQTPFVCEICGQMFKQQCFLRYHQRKHTGERPYSCASCGKSFPLAACAGDVVTQQCFLRYHQRKHTGERPYSCASCGKSFPLAACAGDVVTQQCFLRYHQRKHTGERPYSCASCGKSFPLAACAGDVVTQQCFLRYHQRKHTGERPYSCASCGKSFPLAACAGDVVTQQCFLRYHQRKHTGERPYSCASCGKSFPLAACAGDVVTQQCFLRYHQRKHTGERPYSCASCGKSFPLAACAGDVVTQQCFLRYHQRKHTGERPYSCASCGKSFPLAACAGDVVTQQCFLRYHQRKHTGERPYSCASCGKSFPLAGALASHAAVHARRRPHACHMCARLFTFKSALNKHIKIHLGIRPHKCAICDKGFIHMCDLKLHIKYVHDKVPWPKKKNKRNIGEDTQYLEYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -