Alep002190.1
Basic Information
- Insect
- Acronicta leporina
- Gene Symbol
- Zfy1
- Assembly
- GCA_947256265.1
- Location
- OX366537.1:7591130-7594091[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.011 0.82 10.7 4.0 2 23 134 156 134 156 0.96 2 19 0.00025 0.019 15.8 0.9 1 23 165 188 165 188 0.96 3 19 0.015 1.2 10.2 0.7 2 23 201 223 201 223 0.97 4 19 0.00086 0.066 14.1 1.1 1 23 232 255 232 255 0.96 5 19 0.00027 0.021 15.7 2.9 1 23 268 291 268 292 0.96 6 19 0.00011 0.0086 16.9 0.7 2 23 320 342 319 342 0.97 7 19 0.0011 0.083 13.8 1.2 2 23 352 374 351 374 0.96 8 19 0.033 2.6 9.1 0.5 2 19 379 396 378 399 0.92 9 19 0.00051 0.039 14.8 0.5 2 21 404 423 403 426 0.94 10 19 0.0018 0.14 13.1 1.2 3 23 436 457 435 457 0.96 11 19 0.00023 0.018 15.9 3.5 1 23 462 485 462 485 0.94 12 19 0.0003 0.023 15.5 1.6 2 23 497 519 496 519 0.96 13 19 0.15 11 7.1 0.4 1 23 546 569 546 569 0.92 14 19 0.19 15 6.7 0.1 2 23 576 597 575 597 0.93 15 19 0.43 33 5.6 3.0 3 23 604 624 602 624 0.96 16 19 2 1.5e+02 3.5 1.6 3 23 632 654 630 654 0.91 17 19 2.1 1.6e+02 3.4 0.5 2 23 662 683 661 683 0.93 18 19 0.016 1.3 10.1 0.1 1 23 690 712 690 712 0.97 19 19 0.071 5.5 8.1 1.9 1 23 718 741 718 741 0.97
Sequence Information
- Coding Sequence
- ATGGATATAGAAGTTAAGATTAAGATAGAAGATGTTGAAACAAGGAAAGATCCTACCTCATTTTTACCTGAGGAGCCAATGTCTTATGAAATTAAGAAAAAAAAGAAGAAAAAGAAAAAGCTACAGGAGGACCCCTTCAAGGATATTGATGACAATATGGAAGTTAAAATTGAACCAATAACTTTATTGGATCCAGAAATTACAATAAAGGTTGAGAATTTAGACATAGAATTGGATTTTAATGATTTTGGAGACAGTGGGGAAATAAAGCTTGAAGGTGCTCAAAGTGAGGATGGTCAAAAACCAGTCATTAAAGTTGAGCAAGAAATAGACAATAAAGCGACTGTTGATAATATATTCTCGGACAGTGACCTGCCTCTAAAACAAGCCCCAATGCGTGTCTGCAAAGTATGCCACCTAGTCTTTCAATCAACCAAAACGCTACGCATGCATCAGAAAAGGAAACACAAGTCCTTTAGAAAATCATTCAAACATATTTGCGACTACTGTGGAATGTCCTATGAAATGAAAAACAGTTTAGTTGCCCACATAAAAAGAAAACACGGACCTAATTCAATGCCAGATGACCGAGAAGAGAGGACATGTGAGATATGTGCACTAGTGTTTAAAGGAATGACTAGGTTACGGATGCACATGAGAAGAAAGCATGGGTCGTTCCAGGAATCGTTCCAACACATTTGCCAAGACTGCGGCTTAACTTATGATAAGTACAGAAGTTTGATAGTACATATACAACGTAAACATTCTAATGACAATAAGAAGCCGGAAATAAACCAATGGTACAACTGCCCGTTCTGTCCTAAGATTTTTACAAAACGTGAGACTTACGCTAGACATGTGCAGAGGAAGCACCATGTGCCTGAGGATACAATAAAACAGGAGACATTGCCTGATAATTATTTGGAGAGTTGTAAGAATGAAGAAACTGGTGAAATCACTTGTAAAGAATGCCCCCTAGTCTTTTCTTCAGTCAATTTCCTGAAACTACATATGAGAAGGAAACATAACGCATTAAGAGATGATTTTAGATTGAAATGTAGGATTTGTAACTTGTCTTACGATAAGGTTGAGAGCCTGAAAAGACATGTAAGAAGAAAACATGACAAAGGTTCATATTGTGAAGTATGCAACAAACAGTTTGACACACGAGAAATGTATCTTAACCATTCACATATCAAAGTGATAAAGGAGTGCAATATCTGCGGATTGATTTTCGCATCTCAGGGCGGTTTGGCGAAACATTTGAGGTGTACTCACAAAATGGACTCCCCCAAAACTGTATTCTGTAATATGTGTAATGAGGGTTTCTATGATAAACGCCAATTGAAACTGCATTTTATGAAAGTCCATTTGAAAGTCTCTTACACTTGTCGATACTGCAAAAAGGTTTTCAAAGCCAAGGAGAGTTATCGACGTCACATATTATTTAAACACCCGACGATAAATCATTTTAATGCTCAGATGCAAAAATGCGAGCAATGTAGTGAGACGTTTAAAGATGAATTTGAGCTTTGTCGCCATGTAAATATAGTTCATTGTCGCCTAGAAAATATGACTAAACAAGAAAGAGAAATGCTAGAAATTAAGAAAGAAGAGGCAGATGTAAAAGATTGTTTTCAATGCACCAAGTGCCCTGATACATACTTAACATGGGAACAACTAAAGCTACATTACGAAGCAAATCATCACAATATTGAAGAAACTCAGTGTCAGATATGTGGAGAAATTCTCCCAGGAAATGAATTACAGAAGCATATAAAAACTCTGCATACAGATAATGATATGCATTGTAGATATTGTGAATTCAAAACAAATATAAGAGTCAGTTTGACACAACACATGTTGAGGCATAAAAATGCTGAAACAATTCACTGTAATTACCCTGGTTGCAAATATAAAACGTTCTACGAAGGTGCTATGGAAAAACATAAAAGGAAACATGCTGATCAAGGAGTTAAACTCCAATGTACGCAGTGCCCGTTCCAGTCTATGAATAAGTACATATTAAAATACCACATGGAGGCCCATGAAACGGGAAAGAAACGATATATGTGTGACCAATGTGATTATGCAACGATACTGCCAGCTAATTTAGTGCAACATAAGTATAAGCATTCTACGGAGAAACGGTTCAAATGTGAAGTTTGTCCATTTGCTACCAAGTATAACACATCACTTCGGTTCCATGTGAGGAAAAAACACTGTGATCTCCCTACGTTCAGTTAA
- Protein Sequence
- MDIEVKIKIEDVETRKDPTSFLPEEPMSYEIKKKKKKKKKLQEDPFKDIDDNMEVKIEPITLLDPEITIKVENLDIELDFNDFGDSGEIKLEGAQSEDGQKPVIKVEQEIDNKATVDNIFSDSDLPLKQAPMRVCKVCHLVFQSTKTLRMHQKRKHKSFRKSFKHICDYCGMSYEMKNSLVAHIKRKHGPNSMPDDREERTCEICALVFKGMTRLRMHMRRKHGSFQESFQHICQDCGLTYDKYRSLIVHIQRKHSNDNKKPEINQWYNCPFCPKIFTKRETYARHVQRKHHVPEDTIKQETLPDNYLESCKNEETGEITCKECPLVFSSVNFLKLHMRRKHNALRDDFRLKCRICNLSYDKVESLKRHVRRKHDKGSYCEVCNKQFDTREMYLNHSHIKVIKECNICGLIFASQGGLAKHLRCTHKMDSPKTVFCNMCNEGFYDKRQLKLHFMKVHLKVSYTCRYCKKVFKAKESYRRHILFKHPTINHFNAQMQKCEQCSETFKDEFELCRHVNIVHCRLENMTKQEREMLEIKKEEADVKDCFQCTKCPDTYLTWEQLKLHYEANHHNIEETQCQICGEILPGNELQKHIKTLHTDNDMHCRYCEFKTNIRVSLTQHMLRHKNAETIHCNYPGCKYKTFYEGAMEKHKRKHADQGVKLQCTQCPFQSMNKYILKYHMEAHETGKKRYMCDQCDYATILPANLVQHKYKHSTEKRFKCEVCPFATKYNTSLRFHVRKKHCDLPTFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00327297;
- 90% Identity
- -
- 80% Identity
- -