Basic Information

Insect: Acronicta leporina
Gene Symbol: -
Assembly: GCA_947256265.1
Location: OX366524.1:12671801-12690676[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4.1 3.1e+02 2.5 0.1 1 23 85 108 85 108 0.88

2 20 0.22 17 6.5 0.2 3 23 113 133 111 133 0.96

3 20 0.19 15 6.7 0.1 2 23 137 159 136 159 0.94

4 20 0.0023 0.18 12.8 1.0 2 23 390 412 389 412 0.95

5 20 0.026 2 9.4 0.1 1 19 420 438 420 441 0.94

6 20 0.0073 0.57 11.2 0.3 2 23 451 472 450 472 0.94

7 20 7.9 6.1e+02 1.6 1.5 1 23 488 511 488 511 0.84

8 20 0.0023 0.18 12.8 1.4 1 23 520 543 520 543 0.94

9 20 8.9 6.9e+02 1.5 1.3 8 23 593 609 585 609 0.88

10 20 0.066 5.1 8.2 0.3 2 22 622 642 622 644 0.82

11 20 3.8 3e+02 2.6 1.9 1 23 649 672 649 672 0.93

12 20 3.5e-05 0.0027 18.5 1.9 1 23 678 700 678 700 0.96

13 20 0.00054 0.042 14.7 1.2 1 23 707 729 707 729 0.98

14 20 8.4e-05 0.0065 17.3 2.3 1 23 734 756 734 756 0.96

15 20 0.00059 0.046 14.6 2.3 1 23 762 784 762 784 0.98

16 20 4.7e-07 3.6e-05 24.4 1.9 1 23 790 812 790 812 0.98

17 20 0.00058 0.045 14.7 2.5 2 23 819 840 819 840 0.97

18 20 0.0012 0.092 13.7 0.6 2 23 848 870 847 870 0.97

19 20 3.1e-05 0.0024 18.7 0.4 3 23 877 897 876 897 0.99

20 20 0.0052 0.41 11.6 2.9 2 23 904 926 903 926 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4.1	3.1e+02	2.5	0.1	1	23	85	108	85	108	0.88
2	20	0.22	17	6.5	0.2	3	23	113	133	111	133	0.96
3	20	0.19	15	6.7	0.1	2	23	137	159	136	159	0.94
4	20	0.0023	0.18	12.8	1.0	2	23	390	412	389	412	0.95
5	20	0.026	2	9.4	0.1	1	19	420	438	420	441	0.94
6	20	0.0073	0.57	11.2	0.3	2	23	451	472	450	472	0.94
7	20	7.9	6.1e+02	1.6	1.5	1	23	488	511	488	511	0.84
8	20	0.0023	0.18	12.8	1.4	1	23	520	543	520	543	0.94
9	20	8.9	6.9e+02	1.5	1.3	8	23	593	609	585	609	0.88
10	20	0.066	5.1	8.2	0.3	2	22	622	642	622	644	0.82
11	20	3.8	3e+02	2.6	1.9	1	23	649	672	649	672	0.93
12	20	3.5e-05	0.0027	18.5	1.9	1	23	678	700	678	700	0.96
13	20	0.00054	0.042	14.7	1.2	1	23	707	729	707	729	0.98
14	20	8.4e-05	0.0065	17.3	2.3	1	23	734	756	734	756	0.96
15	20	0.00059	0.046	14.6	2.3	1	23	762	784	762	784	0.98
16	20	4.7e-07	3.6e-05	24.4	1.9	1	23	790	812	790	812	0.98
17	20	0.00058	0.045	14.7	2.5	2	23	819	840	819	840	0.97
18	20	0.0012	0.092	13.7	0.6	2	23	848	870	847	870	0.97
19	20	3.1e-05	0.0024	18.7	0.4	3	23	877	897	876	897	0.99
20	20	0.0052	0.41	11.6	2.9	2	23	904	926	903	926	0.96

Sequence Information

Coding Sequence: ATGTCTTCCGATGAGTCGGACGATGAACCGTTGTCCGTAATAGCGGCAAATAAAAAATTAAATCCAGTGCAATATGAAGGAGAAACATCAGATTCTGTTGAGGTTCCAAAAAAGAAAAAGAAGTTACCAGCTCCTAAACGGCTCCCTGTCACAATAAAGCTTCAACGCAGTAAGACTGGCCAGCAACAGCCAGTGATAGAGAGGCCTGCAGACGTGTGGCTCTATTTAAAAGATTTGAATCCTGCAGGACCATACAGTTGCTTGTTGTGCCCAGAATGGTTTATTAACAAATCAAAAATTATCCTTCACTATGTCCTAAATCACAAGAAAGACTTCTGTGGTATTTGTAGGTATTTTGTTCCTGATAGAGATAGCTGGTGGAAACACTTAAAGTTCCATACTCCTTGGCCATGCTCTCAATGTGTTCAGAACTTTGAAGCTGAAACAGACTTACGGAATCATCTTAAGGCTGCTCACAATCTAGTGCATTGTAGGCTCTGCCATTTCCGAGTTCTTGATGGTGATGCATACCACACACATTTATTCCAGAAACACAATGTCTCGAATGTGTCCAATAAAGATGAAGAAAATTTATGGGAATTACTATATGATGGTACCTCAAACTTCTCATGCTTACTTTGCTCTAAATCCAATAATTCAACTAGAATGTTCTTCAACCACTACATGGGATATCACCACTTCACATTGAAATGCTTCACTGCTCTTGTCTCAGGAAGAGATCCACCATTCATAGTATATGGTGCTGATCTCAGAACTGAATTTGTTGAAGAACAATTAAAACAACATCCAAGGTATGGCTATGTTGATTCTGACTTCCAGCCTCAAGTTGGTGTAGAAACCGAACAGACTGATACAAAAGATTTGCTAAAAGTTCTTATACCAGAAATTAAACAAGAAATTTTAAATATAGAGGAAGCTAAGAATGCTGATGGAGCTGACAAATCCAAGGATGATGACGATGATGATGTCTATAAGAACTATAATGGTGATGATGATTTTGATGTAACATCAACTGAACTCATAGTTTTACAGAAATGTTACTATGATTACATAAGTGACATATTGTCTGACATCAATTCCAAATCCTTTTATGAATACTCTGACATTGACTATGATAAAGCTACAACTGAGGTTACAATGGATATAGTTTGCACACTGTGCAGTATTCGGTACAGCACTTTGTCAAGTTTCACCACACACATGTTTAAAATGCACTGTATAAAATCTCTACCACTATTTTCATGTAGAGTGTGTGCAACAACATTTGAAACTCAAAATGAATTAGAGAGTCATGCATCTAATGAGCTAGGTGACTTTGAGGATCTGTGGATCTGTCAGTTTTGTGACAAGGAATTTGATGACAGGGAGGCAACACGACGTCACCTAACTGAACATTGGGATCAAGTGGAATATGATAATTGTTTCAGTCCTCATTTAGGCTTCAAATGTAGATATTGTCCCACATTGTTTTGGCATGAAACAGACAGGGAAACACATCAAGTTCGGGCACATTTCTTCAACCATAAGGAAGGGTATTACAAGTGTGAAAGTTGTAATGAAGTATTCAGTGACAAGATCTGGTTTGTCCACCACTACCTAGAAAGACACAGTACTCCAGATAAAGTGCCTCTGTATTTGCTCAAATGTTCTCTTTGCTGCCTGGTATTGGCCAATGTTGAGGAGATGAGGGCCCACTTCAACAGCCTTCACCCCGAGGCCAGGAAGGTGTTCTGCTCTTTGGACTCTTGCCAATACAAGCCTTTGAGTCATCGCAAGTCCTTTAAACTACATGTGCGGACGATGCACACGTCGCGGTCGCGGTCGCGGGCGGAGCAGACCGCGGAGTGCACGGTGTGCGGCCGCGAGTTCAGCAGCTCGCGCGCATGCGCCGCGCACGTGGCGCAGGCGCACGGGCCCGGCAAGTTCAAGTGCAAGCTGTGCCGCGAGGTGCTCCACACTATGGACGAGAGGAAACTCCACTACCTCATCAGTCACCCTGGACAGCATCCGTTCGAGTGCTCAGACTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTATACATGCACAAGCAAGACCACCAGCCCAACAAGCAGAACTACACATGCACCTATTGTGGGAAGATATTTTTGAAGCGCGACTCGTTCCGCGAGCACGTGCAGATCCACGAGGGCCCGCGGCACGCGTGCTCGTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGCCGCCACACCGGCGAGCGGCCCTACGCCTGCCCGCACTGCTCCAGGAGCTTCGCCGACAAGGGAGCCTGCAACTCTCATGTCAGGACGCATTTGAAGAATATCTCTTACGCATGCATGTACTGCGGGAAGACATTCGTGCAGAAGTCCAAGTTGACGTACCACATCAGAAAACATACTGGAGAAAATCTGGAGACCTGCTCGGTATGCTCCAAATTGTTCACGAGCGCTTGCTCGCTGCGTGAACACATGAAAATACATGAACCCAAGAAGGAACAGATTAAATGCCCACTGTGTGAGCGCACGTACCAGGACGAGCGCTACATGCTGCGGCACCTGCGCACGTCCCACACGCACGCGCGGCACGGCTGCCCGCTGTGCGGCAAGATGCTCACCAGCCCCTCCAGCCTGCGCCACCACGTCATCACGCACAGCAAACTCAAGACGCTCAAGTGCAAGATGTGTTCAAAAGCATACTCAGTGAAGAAGACGATGATCAAACATTTCAGGCGTCGACACGGCTTCAAAGGTAATGAACCGAACATAAAGGAGTTCTTCACTAGGATGGACCCGAGGGATTGTAACCTAGGCCTAGATGAGCCAATCATGACCAGCTTATTCGGGCCTCCTGGCAAACCAAAAATGAATAACATTTTAGTTGCCAACTTTGTGACTCTATCGAATCTAGAACAACAGAAAAGACTAGCCGAACAGAGAGAAGAGAGTGAGAGTACTGGAGATGTGCATTATGAAAAGTCACAGTCAGACGAGATGTCAAGAGCGAGTGAAAAGGAGATGGATAGTGGTGAAAAAGATGACAAGAAAATTATCATTAAAGTGGAACCTAAAGATGAGGGTGACCATGATGAGTTGGAACCCACTGACTTCGTCAGCGTCAAGATTGAACCAATGGATGATCAAGATGACGATGAAAATTAA
Protein Sequence: MSSDESDDEPLSVIAANKKLNPVQYEGETSDSVEVPKKKKKLPAPKRLPVTIKLQRSKTGQQQPVIERPADVWLYLKDLNPAGPYSCLLCPEWFINKSKIILHYVLNHKKDFCGICRYFVPDRDSWWKHLKFHTPWPCSQCVQNFEAETDLRNHLKAAHNLVHCRLCHFRVLDGDAYHTHLFQKHNVSNVSNKDEENLWELLYDGTSNFSCLLCSKSNNSTRMFFNHYMGYHHFTLKCFTALVSGRDPPFIVYGADLRTEFVEEQLKQHPRYGYVDSDFQPQVGVETEQTDTKDLLKVLIPEIKQEILNIEEAKNADGADKSKDDDDDDVYKNYNGDDDFDVTSTELIVLQKCYYDYISDILSDINSKSFYEYSDIDYDKATTEVTMDIVCTLCSIRYSTLSSFTTHMFKMHCIKSLPLFSCRVCATTFETQNELESHASNELGDFEDLWICQFCDKEFDDREATRRHLTEHWDQVEYDNCFSPHLGFKCRYCPTLFWHETDRETHQVRAHFFNHKEGYYKCESCNEVFSDKIWFVHHYLERHSTPDKVPLYLLKCSLCCLVLANVEEMRAHFNSLHPEARKVFCSLDSCQYKPLSHRKSFKLHVRTMHTSRSRSRAEQTAECTVCGREFSSSRACAAHVAQAHGPGKFKCKLCREVLHTMDERKLHYLISHPGQHPFECSDCGKSFQYKSSLYMHKQDHQPNKQNYTCTYCGKIFLKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCSRSFADKGACNSHVRTHLKNISYACMYCGKTFVQKSKLTYHIRKHTGENLETCSVCSKLFTSACSLREHMKIHEPKKEQIKCPLCERTYQDERYMLRHLRTSHTHARHGCPLCGKMLTSPSSLRHHVITHSKLKTLKCKMCSKAYSVKKTMIKHFRRRHGFKGNEPNIKEFFTRMDPRDCNLGLDEPIMTSLFGPPGKPKMNNILVANFVTLSNLEQQKRLAEQREESESTGDVHYEKSQSDEMSRASEKEMDSGEKDDKKIIIKVEPKDEGDHDELEPTDFVSVKIEPMDDQDDDEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00758517;
90% Identity: iTF_01377743;
80% Identity: -