Basic Information

Insect: Acronicta leporina
Gene Symbol: -
Assembly: GCA_947256265.1
Location: OX366539.1:2875563-2885535[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.055 4.3 8.4 0.2 1 23 352 375 352 375 0.88

2 16 0.0039 0.3 12.0 1.1 2 23 401 423 400 423 0.95

3 16 0.007 0.54 11.2 1.6 1 23 445 467 445 467 0.96

4 16 4.7e-05 0.0036 18.1 1.0 1 23 471 493 471 493 0.98

5 16 0.0045 0.35 11.9 2.5 1 23 498 521 498 521 0.97

6 16 0.0015 0.11 13.4 0.7 2 23 529 551 529 551 0.93

7 16 0.00028 0.022 15.6 1.8 2 23 559 581 558 581 0.94

8 16 0.016 1.3 10.1 3.0 2 23 792 814 791 814 0.94

9 16 0.0015 0.12 13.4 0.7 2 23 839 860 838 860 0.96

10 16 0.00046 0.035 15.0 0.4 1 23 864 886 864 886 0.96

11 16 0.0059 0.45 11.5 2.1 1 23 891 914 891 914 0.96

12 16 0.011 0.86 10.6 0.1 2 23 922 944 922 944 0.93

13 16 0.0035 0.27 12.2 2.4 1 23 951 974 951 974 0.95

14 16 0.00032 0.025 15.5 2.4 1 23 980 1002 980 1002 0.97

15 16 8.3e-05 0.0064 17.3 3.4 1 23 1008 1030 1008 1030 0.98

16 16 2.2e-05 0.0017 19.1 2.0 1 23 1036 1059 1036 1059 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.055	4.3	8.4	0.2	1	23	352	375	352	375	0.88
2	16	0.0039	0.3	12.0	1.1	2	23	401	423	400	423	0.95
3	16	0.007	0.54	11.2	1.6	1	23	445	467	445	467	0.96
4	16	4.7e-05	0.0036	18.1	1.0	1	23	471	493	471	493	0.98
5	16	0.0045	0.35	11.9	2.5	1	23	498	521	498	521	0.97
6	16	0.0015	0.11	13.4	0.7	2	23	529	551	529	551	0.93
7	16	0.00028	0.022	15.6	1.8	2	23	559	581	558	581	0.94
8	16	0.016	1.3	10.1	3.0	2	23	792	814	791	814	0.94
9	16	0.0015	0.12	13.4	0.7	2	23	839	860	838	860	0.96
10	16	0.00046	0.035	15.0	0.4	1	23	864	886	864	886	0.96
11	16	0.0059	0.45	11.5	2.1	1	23	891	914	891	914	0.96
12	16	0.011	0.86	10.6	0.1	2	23	922	944	922	944	0.93
13	16	0.0035	0.27	12.2	2.4	1	23	951	974	951	974	0.95
14	16	0.00032	0.025	15.5	2.4	1	23	980	1002	980	1002	0.97
15	16	8.3e-05	0.0064	17.3	3.4	1	23	1008	1030	1008	1030	0.98
16	16	2.2e-05	0.0017	19.1	2.0	1	23	1036	1059	1036	1059	0.98

Sequence Information

Coding Sequence: ATGTCGGATGAAAAAACTGAGATAGAGACCTACTTCGGTAGGTGTAGATGTTGCCTTTCTTATGGCTATTTGAAAAACATGTGGTCCGAATATGACTTCGAAGGAGAAACAGAAATCTACGGCGAAATGCTGGTCCAATGTTTTGCGCTGTCTTGGGAATACTCAGAAGATACCATCGATCAGGATCAGATTTGTGAGCAGTGCATCTGTCGGCTGAGAGATGCAAGCAACTTCAAGAAAATTGTGCTTGATTCACAAGATGAACTTCTCAATGAGTTCAATACAGAAACTGAATTCATTGTAAAAGAAGAAGTACAAGAGCAATATCCCGATGATAATCTTGCTGTCACCACTGACACTGTTACTGAATACACCGAAGACACCGCTGACACCGATAGTGTCAAAGAGGACATGGAGTATAAAGAGGACATGGAGTATCAAGAGGTGGAGTATCAAGAGGTGGAGTATTTGGAGGATGAAGACTTGGAAGATACTAAGGATAATATTGATACTGATTCCTCGCAGCCATCTGGGCATAAGCGAAAACAGCTCGACAAGCAAGACGACGAGGAGACACCAAAACGCAAATGGCCCAAAAAATTGCCCAAAGCGGAACGGCATAAGACATATAAGCAGTACACTGAGGAGACGTTCCGGAAGTGCTTGGAGGCTGTAAGGAACTCGGAAATTACGGCACAGGAAGCTTCCAAAAAGTACAATATACCGAAAAAGACGATTTGCGCCAGATTGAAAATGGATCCTAATGATGTCCAGATTGACAATACAACGGAATCAGAACTGTTACAACCAAATAAATCAAACCTGCGCAGTATATCTCCCATATACACAGACGAAGTGGCTGTAGAGGATGAGATTGACCAATTTATCGAATTCATAGAGGAACAGGAAGGAGCCGATGAAACACAACTTCCTGAAACTAACGACGATGCTGAAAAACCAGAATACAGTGACACGCATAAACATAAAAACAATATAAAGGCTGTATTACTATGTTCTAATGCAACCGTCATCAGAGATGCCACGAGAAATGGCTACCTTTGCAATTTTTGCGAGGGACAATTCGCAACGCCTTCTGATTTGAAACTACATAACTTGGAAACTCACGCTAGACGAGCCGGCCAGGCTGTGAAAACGAAATATCTTTCAGAACTAGTGACAAAGCTAGATATTACTGGTCTTAAATGCAAGTTGTGCAAGAAATCAATAGATTCCTTAGATAATTTATTGCAACATCTTAGTAAAAAACACTCAATATTGATCTATAACGATATTAAAAACTACATGATACCGTTCAAATTCGATACCGACGCGTTCAAATGTGTGCAATGTCAGAAAACTTTTAATTACTTTTATGTTCTTGCGGAACATATGTTCGAACATTATAGGAATTTCAAGTGTCCATTGTGCGATCGCGGTTTCATAACTAAACAGGCATTCGAAACACACAGCCGCAAACACAAAAGCAGCATTTTCAAATGCCCCCATTGTCCCATAGTGTTCGACACTCCATTGAAAAGACACGAACACATGAAATCCCAACACACAAATTTCATTACTTTTAGAAAATGTGAACACTGCGATGAAAGATTCCAAACATGGAATTTATTAGTCAATCACGTGGTCAAAGGTCACGGATTAAACCCCCCTGTTCTCTCCTGCGCCGAATGTGGAAAGACCTGTATCACCCAGAGTTCTTTGACACTCCACAAAAATAATTACCATCTGCAGTCAAAGCTTATCAAATGTCCTCGCTGCCATGTCCAGATTGACAATACAACGAATTCCACATATGGATGGAAATTGACACCGCATATAACGAAACTGGAGAAAAAACCAAATATCTTGCGGAGAACCTCTCTAAATGAAACTACTAAAAAATTAATAGAAGAGCATAAATTAAAAGCCAAACTACATATAAATAAAAAATCTATTTCTACATCAGTAACAGGCGATATAATTACAGAAAGAAATCTAAATACAATTGATATGTTAAATATTGACTCTAAAAGTGAAGTAACTAAAGCGCCTGTAAACGCGGAGCAAGTGCGAGCTCGATACAAAGCGATTGTTAATGAAAAATGTAAGAATGAGGACGAGGAACCTGCAAGATCTGATAACGGAGAAATGGACAAACATAAGCACAATATAAAGACCATATTAGAAAATACTAATGCAACTGTTATCAAAGGATTTTGGGGTGTCGGTTTTGCTTGCAACTTTTGCGAAGAACAAAGGGAAATACCTTGGGAATTGAAACAACATAATCTAGAGGCCCACAGTAATGTAGGTAGCGAGGCTATCAGAGTAAAATACGTTTCAGACTTAGTTATCAGACTCGATATAACGAACCTTAAATGTCAACAGTGCGAAAAATGTTTGAACACTCTAGAAGATCTAATGCATCACTTGAGCAATGTTCACTGCAAGTTAATACATATGGATATAAAAAACCATATAATGCCTTTCAAATTTGATAGGTTACTTGATACCCTCCAATGCGCGATTTGTAATAAAGAATTCAAGTTTTTCAAGCTATTATCAGAGCATATGAGTGAGCATTACAGAAATTACGAATGTCCTTCTTGTGAACGAGCTTTTATCAATAAGCAAGCGTTGCAGCAACATAGCTATAGACATAAAAGAGGCGTCTTTAAGTGTACACACTGCTCAAAAGTCTTTGACTCGCGACCCAAGAGAAGCGTTCACGAAAGAGTCGTGCATACATTATCGAATAAGACACGGAAATGCGCGTACTGTGACGAGAGATTCGCGACAAAAGACATGGTGTTGAGTCACGAAGCGAAAGTTCACGGAATGGAGCCTACAGTCTTCTTCTGCCAAGCGTGCAACAAATCTTATCAGAGCCAGAGCTCTTTGATCACACATAAAAACCGATATCACTTACTGCGGAGACCACACAAATGCTCCTATTGCGACATGGCGTTTTTCTCCAAAGTTGAGTTAAGATCTCATACGGTAACACACACAAAGTTAAGAGACTTTAAATGTCAGGTCTGTAATAAGTATTTCGGTACGCAGTGTGGCTTACGCCAGCATATGAGAGGCCATTCTGGTGATAGGAGATATAAATGTGATAGTTGTGATCGGGCATTTGTAAATCGGACTACTTTTAAGGTTCATATGAGGAATAAGCATGGGATAGTGGTGTAG
Protein Sequence: MSDEKTEIETYFGRCRCCLSYGYLKNMWSEYDFEGETEIYGEMLVQCFALSWEYSEDTIDQDQICEQCICRLRDASNFKKIVLDSQDELLNEFNTETEFIVKEEVQEQYPDDNLAVTTDTVTEYTEDTADTDSVKEDMEYKEDMEYQEVEYQEVEYLEDEDLEDTKDNIDTDSSQPSGHKRKQLDKQDDEETPKRKWPKKLPKAERHKTYKQYTEETFRKCLEAVRNSEITAQEASKKYNIPKKTICARLKMDPNDVQIDNTTESELLQPNKSNLRSISPIYTDEVAVEDEIDQFIEFIEEQEGADETQLPETNDDAEKPEYSDTHKHKNNIKAVLLCSNATVIRDATRNGYLCNFCEGQFATPSDLKLHNLETHARRAGQAVKTKYLSELVTKLDITGLKCKLCKKSIDSLDNLLQHLSKKHSILIYNDIKNYMIPFKFDTDAFKCVQCQKTFNYFYVLAEHMFEHYRNFKCPLCDRGFITKQAFETHSRKHKSSIFKCPHCPIVFDTPLKRHEHMKSQHTNFITFRKCEHCDERFQTWNLLVNHVVKGHGLNPPVLSCAECGKTCITQSSLTLHKNNYHLQSKLIKCPRCHVQIDNTTNSTYGWKLTPHITKLEKKPNILRRTSLNETTKKLIEEHKLKAKLHINKKSISTSVTGDIITERNLNTIDMLNIDSKSEVTKAPVNAEQVRARYKAIVNEKCKNEDEEPARSDNGEMDKHKHNIKTILENTNATVIKGFWGVGFACNFCEEQREIPWELKQHNLEAHSNVGSEAIRVKYVSDLVIRLDITNLKCQQCEKCLNTLEDLMHHLSNVHCKLIHMDIKNHIMPFKFDRLLDTLQCAICNKEFKFFKLLSEHMSEHYRNYECPSCERAFINKQALQQHSYRHKRGVFKCTHCSKVFDSRPKRSVHERVVHTLSNKTRKCAYCDERFATKDMVLSHEAKVHGMEPTVFFCQACNKSYQSQSSLITHKNRYHLLRRPHKCSYCDMAFFSKVELRSHTVTHTKLRDFKCQVCNKYFGTQCGLRQHMRGHSGDRRYKCDSCDRAFVNRTTFKVHMRNKHGIVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017284;
90% Identity: iTF_00017284;
80% Identity: iTF_00017284;