Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_947256265.1
Location
OX366515.1:15429090-15435996[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-06 0.0044 17.5 0.0 2 31 294 327 293 335 0.86
2 2 1.1e-09 1.1e-06 29.0 0.1 2 43 375 421 374 423 0.86

Sequence Information

Coding Sequence
ATGCGGTGGAGTTTATTGGTATTATTTTCGTTGATTTTGGGGGCAAGAGCTTGGGACGATGGTGATTTAGAAGTGTTTGACGTGGTCGAAGAAGTTAATCAGAACTTTTATGAATTGTTGGGTGTAACACAGGATGCTTCACCAGCAGAAATCAAGTCCGCATTTAAGAAACTCACACTGAAGCTCCATCCAGACAAAAATGATGCCCCCGATGCAGATGTTCAGTTCAGAAACCTGGTGTCAGTCCACAACATACTCAAGGACCCAGGGAAAAGAGAAAAGTACAATGAGGTGCTCAAGAATGGTCTTCCGAACTGGCGATCAGCCATATACTACTACCGACATGTGAGGAAGATGGGTCTGGCTGAGGGCTCCATCATACTCTTCATCATCATCACTTTTGGCCAGTATGCTGTCGGATGGGCTGCATATGCTGAGAAGAGGTTTACTGCAGAGCAGATACTTAACAGCAGAGGCAAAAAGCACTCCAAGAAGTCTGGCTTTGACCAAGGCTTATCAGATATCTTGGACCAGCTTCCAAAGCCCAGTGTAAAAGACACATTACCCTTCCAAATACCAAGGTGTGCCTGGTGGCTGGTAACAGCCATCCCTAGAGGAATCATAGAACTTAGGAGAAGATTAAAAGAACAGGAAGAAGAAGCAAGAAGACAGAAAAAGAGGGAAGAAGAAGAGAGAGCCAGAGCGACTCGCGAGGCGGCGGCGGCGGCCGAAGCCAAGGCGGCGGGCGGAGTGCGCAAGCGCCGCGGCTTCGTGCCGCCCGCCCGGGACGCGGGCTGCCTGCTCGACCCCGCGGACGAGCCTGAAGGAGGACCCGTCGTCATGCCTGTCAGACAGGCCGCTGCTCCAGTGATAACGGGCGGTCTATGGACGGATGATGACCTAGCTGAGTTAGTTCGTCTGGTGAAGAAGTACCCGGGCGGGTCGGCGGAGCGCTGGGAGCGGATAGCGGACGCGATGTGCCGCAGTGTGCCGGAAGTGACGCACATGGCCGCCAAGCTCAAGGAGAACTGCTACAAGATACCCGGCCAGGAGCCTGAACAACCCGTCGTTGTTGAACAGCCTAAGAAGGTCAAAACTCGCAAAGCGGAGGAGACTTCTAGCGGCACCTGGTCGCAGACGCAGCAGAAAGCATTGGAGAGCGCACTCGCCAAGTATCCCAAAGGCGGCGCCGGGGACCGCTGGCAGAAGATAGCCAACGCCGTGCCCGACAAGACCAAAGAAGAATGCATGCAAAGGTGTAAATATCTATCAGATATGGTGAGAAAGCAGAAGCAGAAAGAGGAAGAAGAAGCGCAACAGAATGCAGATGATGACGTCATCACAACAGAAGATCGGCCAGACGAGTCATAG
Protein Sequence
MRWSLLVLFSLILGARAWDDGDLEVFDVVEEVNQNFYELLGVTQDASPAEIKSAFKKLTLKLHPDKNDAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGSIILFIIITFGQYAVGWAAYAEKRFTAEQILNSRGKKHSKKSGFDQGLSDILDQLPKPSVKDTLPFQIPRCAWWLVTAIPRGIIELRRRLKEQEEEARRQKKREEEERARATREAAAAAEAKAAGGVRKRRGFVPPARDAGCLLDPADEPEGGPVVMPVRQAAAPVITGGLWTDDDLAELVRLVKKYPGGSAERWERIADAMCRSVPEVTHMAAKLKENCYKIPGQEPEQPVVVEQPKKVKTRKAEETSSGTWSQTQQKALESALAKYPKGGAGDRWQKIANAVPDKTKEECMQRCKYLSDMVRKQKQKEEEEAQQNADDDVITTEDRPDES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01075387;
90% Identity
iTF_00810014;
80% Identity
-