Alep015911.1
Basic Information
- Insect
- Acronicta leporina
- Gene Symbol
- clz9
- Assembly
- GCA_947256265.1
- Location
- OX366511.1:3446743-3448796[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-07 0.00026 21.1 0.0 4 37 19 52 16 60 0.88 2 2 6.4 4.8e+03 -2.2 0.0 15 30 146 166 139 168 0.62
Sequence Information
- Coding Sequence
- ATGCCACGAGTATATGTTAAAAAAGGGACAAGATCAGGGGAGGTCGATGAAGTTGCTATGCAGTCTGCGATTAATGAAGTCCTAGATAAAACGTTGTCTATCAGAAAATCTGCAGAAAAATATGGCGTAAAACCTACCACACTTGAAAGCCGCTTGACGAAGTTGAAAAAATCTTCTGAGGAGGAGAGAAATAACTCTCTAAAACGTGTGTATACTTCAAAGTTTAGTTCTAATCAAGTATTTTCAGTTGAGGAAGAGACTTTATTGAACAAGTACATTTTAAAATGTTCTAAAATGCATTATGGGTTAACAATTGAACAGGTGAGAAAATTGGCATACGAATTTGCTAAGCCTAATAATATAAAATATACAACTAGCTGGGATCACAATAAAATGGCAGGGAAAGATTGGATGGAAAGCTATCGTAAGCGGAACGAAAATTTGAGTCTGAGGAAGCCTGAAAACACGAGTGCAGCAAGATCTTACGGATTCAACAAAACGGCCGTGAGTGATTTCTACGACAATTTGGAGAAGATTTTGGTCAAATATGAACTCTCTGCAGATAGAATCTACAATTTTGATGAATCTGGGATATCGACAGTACTCAGCACGCCTAGGGTGTTGGCTGAGAAAAAACAGAAACAAGTTGGCCAATTTGTTTCGGCCGAAAGAGGAGAACTCGTTACGTTTGGATCACTTCATGATGGATGCCCCGGAAGGCAGCCTAGGAGCAGCTACGAAGAGTGGCTGGATAAACGCCAGTATATTTTTGGAAGTACTGCAACATATAAAAAAAAAACATGCTGCTCCAAAGATAATCCCATTCTACTACTGGTCGACAACCACGAAAGTCATGTGACAATCAAAGCTGTGGATTACGCCCGCGATCACGGCATCATTTATTTGTCGTTCCCACCCCACACGACACATCGTCTACAACCTTTAGACGTGGGAGTATTTGGGCCTTTCAAAGCCAAGCTAAAGGTAGCTTTTAATGATTGGCACGTGAGCAATGCGGGGAAGACCCTCAATATATACAATATACCAAAACTGGCCAAAATCGCATATTTTGAAGCATTCACTTCCAAAAATATAACAAATGCCTTCGAAAAAACTGGAATATGGCCACTCAATAAGCTGACTTTCAGCGATGATGATTTTGACGCCGTGCAAGTTTATCATTCACAGTCTACAGCAGGCCCTGATGACAATGGGCAACAAGCTATTTCAGAAGAAATAGTTTTTACTGAAGTAGATCAACTATCACCAAGACCAGAGGCACACTCGCCGTCTTTATTAGAGAAGCCATCTACATCTGCTGGGTTAATAACGCCAGAAATGATCCGACCCTACCCTAAAGTGGCTAGAGATTTGAACAAAAAGTCCAAAAAAGGCAAACTACCTGGCAAATCTCGAATTTACACAGATACTCCAGAAAAAAATAGGCTGGAAGATATAGAAAAGACAAAACAGCTAAAAAAGCAAGAGCAAGAGCGAAAACAAAGGGCTAAAGAAATGAAGAGGGCTTTAAAATTGATTTCGGGTAGAGATTTAAGTAAACCAAAGAGAAAGAAGCAAAGTACAGATACTGAAAGTGAAGATGAGACTGACACGAGTTTAAGAGAAAGTTCCTGTTCTCCCATTGAAGAGATTGCTGAAGGATCTGATGTGGAGAACGAAACTCCAGTTTTAACTGAATTCGTGAAAGAGAATGGCTTTATTCTAGTGAAGTTCGAGAAGAAAAAGTCTGTCAAACACTATGTTGGTCAGGTGATTACCAAATATAGTCCCACTGAGTACAAAGTTTCATTTTTAAGAAAGAAACCCGGCGTCTGGAAATTTGTTTTTCCCAATAACATAGACGAAGGTACTGTTTACATATCAGACATGGTATGTATATTGCCAGAACCCACATCTGCTTCTACAGCAAGAACAGCTAATATATTTAGCTTTCAAAAAGATCTGTCTATGTACAATGTGCAATAA
- Protein Sequence
- MPRVYVKKGTRSGEVDEVAMQSAINEVLDKTLSIRKSAEKYGVKPTTLESRLTKLKKSSEEERNNSLKRVYTSKFSSNQVFSVEEETLLNKYILKCSKMHYGLTIEQVRKLAYEFAKPNNIKYTTSWDHNKMAGKDWMESYRKRNENLSLRKPENTSAARSYGFNKTAVSDFYDNLEKILVKYELSADRIYNFDESGISTVLSTPRVLAEKKQKQVGQFVSAERGELVTFGSLHDGCPGRQPRSSYEEWLDKRQYIFGSTATYKKKTCCSKDNPILLLVDNHESHVTIKAVDYARDHGIIYLSFPPHTTHRLQPLDVGVFGPFKAKLKVAFNDWHVSNAGKTLNIYNIPKLAKIAYFEAFTSKNITNAFEKTGIWPLNKLTFSDDDFDAVQVYHSQSTAGPDDNGQQAISEEIVFTEVDQLSPRPEAHSPSLLEKPSTSAGLITPEMIRPYPKVARDLNKKSKKGKLPGKSRIYTDTPEKNRLEDIEKTKQLKKQEQERKQRAKEMKRALKLISGRDLSKPKRKKQSTDTESEDETDTSLRESSCSPIEEIAEGSDVENETPVLTEFVKENGFILVKFEKKKSVKHYVGQVITKYSPTEYKVSFLRKKPGVWKFVFPNNIDEGTVYISDMVCILPEPTSASTARTANIFSFQKDLSMYNVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00851746;
- 90% Identity
- -
- 80% Identity
- -