Alep010580.1
Basic Information
- Insect
- Acronicta leporina
- Gene Symbol
- -
- Assembly
- GCA_947256265.1
- Location
- OX366523.1:512436-514571[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-09 3.4e-06 27.1 0.0 3 40 24 62 22 64 0.91
Sequence Information
- Coding Sequence
- ATGCCCAGAAAAAGACCGTGTCCAGCACCTGGAACCCGCAAATATGGTAAGAAAACCCGTTACACCGCAGATATCCTGGAAAAAGCCCTAAATGACATAAAAACCTGCAAAATGTCTCAAAGGGTTGCTTCTGAAACGTATAACATTCCAAGGAGTACATTAAAGTACAAATTAAAAAATAAACATAATAGACCAGTTGGCAAGCCCCCCGTTCTTTCAGCAGAAGAGGAGGACTGTATATGCAGTCATATCGTAGCCTTAGCTGACCACGGCATACCTGTAAGCATGCAAGATGTGCGGGTAATTGTTAAAAAATATCTTGACGACCAGAACAGGAGCATAAAAACATTTAAAAATAATTTGCCTGGATGGGAGTGGGGTAAACTGTTTCTAGAGCGCCACAGCGATATCAAGCAAAAGTTCGCTCATTGTATAAGTCGTAAGCGAGCTCAGGTAACTCAAGATATAATTCAGCAATATTTTGAGAATTTAAGAACGGAGCTTGAAGGTGTTCCGCCCAGTCACATTTTTAATTTCGATGAAACAGGGTTTCATGATAATCCCAAAAAGGAAAGACTCCTTTTCAAACGCGAATGTAGAAACCCTGAAATTATCAGAAATTCCACTAAATCCTGTTTCACAGTAATGTTTTGCGCGAATGCAGCAGGTGAATTTGTTCCATTATATGTTATTTACAAGGTTAAGCAAAAGTGGTCTGACTGGATTAAAGGTGCTCCAACAGGTACTCGAATGGCTGTGACACCATCAGGTTGGATAGATGCCACAACTTTCGATGACTGGTTCGAAACACAGTTACTCCCTATTTTGAAAAACAAGGAAGGAAAGAAGGTCATTATTGGAGACAACCTAAGCTCTCACATTACGACAAAATGTCTTAGACTTTGCGCGGAAAATAACATCAAATTCATATGCCTTGTCCCGAATTCTACACACTTATTACAGCCATTAGATGTATCGTATTTTAGCGCATTGAAAACAAATTGGCGGCAAATTTTACGTGACTGGAGGAATACAAAACGAGGTAAAATTATTAACGCCCTGCCAAAAGGAGTATTCGCAGCCTTGCTTTCCAAAACTATAGAAGCAGGCAAACAGACTGCAGCACAAAACGTCATTGCTGGATTCAAAGCTTGTGGACTGTACCCATTTGACAGTGAAGTAGTTCTTAAGAAACTTAAAGATTACACCAAGCCAATGGAAGAAGTTCGCGATTCAATTGGGGAGACTTTTAAAAATTACTTGACAGAATTACGAGACAATGACTTACTAATTAAGCAGAATAGGAAATTTCAGATACCTGTAGTTGCGGGCAAGAGCGTGTCTGTGGAAGAAGTAGAAAAATATTACCAAGAAAGAGAAGCTAAGGAAAAGGGACAAAAGAAAGGGCAAAACAAATTAAATAGCTCAAATATGCAAGTGCCTACCAAAAAAAAGGGACGACCAATAGGATCCAAAAATAAGCCCAAAAGTAATGCGGCAGTATCGTCCATAACTAATGTTGGAGATACTTCGTTGGATGCTGATAATACTTCTATTCGCTCTCAGACACCAGTTCCTGGCCCATCGAACATAAAGTTGACATCTGTTGGTGACTCTTCCGTTAATCAACCTTCTTTGCTGATTGACGGAACCTCACACGATGTTGAAGCCGTATGTCGCACTCCATCGCCTCATACCTATTTATCTATCACGGACCACGACATATCATTTCAAGACCAACCGAATTTTCAAATTCCGTCACCAACTCAAGAAATCGAAATAGTTACATCACCGAAAGATATTACAGGAGAATATGAAGTTCATCAAGGGACATTGGAGAAAGTAGACAATGGCAATAGAAATAAGAAAACCAAAGAACAAAGCGGTGGCCGATATTGTGTGGTTAAGCATGAAGAATGTCTTTTCCCAGGTCGAATCACACGCGCGGAAGGCCCAACATGCACCATTTCTGTGATGCAGAAGACATTTGAAGGATGGAAGTGGCCTTCTAAACCTGATTTATTAGTGTGCAATCAAACTAGCATTGTTAGTTATATAGATGATAAGAATATTATAAAACGAGGGGATTCTTACATGATCGAAGACCATTTTCTGTAcatggaatggggtgattga
- Protein Sequence
- MPRKRPCPAPGTRKYGKKTRYTADILEKALNDIKTCKMSQRVASETYNIPRSTLKYKLKNKHNRPVGKPPVLSAEEEDCICSHIVALADHGIPVSMQDVRVIVKKYLDDQNRSIKTFKNNLPGWEWGKLFLERHSDIKQKFAHCISRKRAQVTQDIIQQYFENLRTELEGVPPSHIFNFDETGFHDNPKKERLLFKRECRNPEIIRNSTKSCFTVMFCANAAGEFVPLYVIYKVKQKWSDWIKGAPTGTRMAVTPSGWIDATTFDDWFETQLLPILKNKEGKKVIIGDNLSSHITTKCLRLCAENNIKFICLVPNSTHLLQPLDVSYFSALKTNWRQILRDWRNTKRGKIINALPKGVFAALLSKTIEAGKQTAAQNVIAGFKACGLYPFDSEVVLKKLKDYTKPMEEVRDSIGETFKNYLTELRDNDLLIKQNRKFQIPVVAGKSVSVEEVEKYYQEREAKEKGQKKGQNKLNSSNMQVPTKKKGRPIGSKNKPKSNAAVSSITNVGDTSLDADNTSIRSQTPVPGPSNIKLTSVGDSSVNQPSLLIDGTSHDVEAVCRTPSPHTYLSITDHDISFQDQPNFQIPSPTQEIEIVTSPKDITGEYEVHQGTLEKVDNGNRNKKTKEQSGGRYCVVKHEECLFPGRITRAEGPTCTISVMQKTFEGWKWPSKPDLLVCNQTSIVSYIDDKNIIKRGDSYMIEDHFLYMEWGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01192642; iTF_00282247; iTF_00327020; iTF_00794449; iTF_00809056; iTF_00017282; iTF_00383589; iTF_00794450;
- 90% Identity
- iTF_00794450;
- 80% Identity
- -