Alep018775.1
Basic Information
- Insect
- Acronicta leporina
- Gene Symbol
- TIGD6_1
- Assembly
- GCA_947256265.1
- Location
- OX366539.1:3806672-3807877[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-10 7.1e-07 29.3 0.0 2 42 16 56 15 59 0.87
Sequence Information
- Coding Sequence
- atgccaagaaatcgccaaaggaccaccgctaaagCGGCTTGGTCCGAAGGAGACCTTCAGTCAGCTAAAACTGCGATTGATGAAGGTTTGTCCAAAAGAAAAGCAGCCAAAACATATAACATTCCTTTTACTACTTTGAGAGATCGCTTAAAAAACGAAAACATGACTAACCCAAGGCTAGGTCGCAAGCCCGTTTTTACCGAACAGCAAGAAACTGAAATTGCTGACCAAGTTAAGTTGCTGGGTTCATTATACTATGGTCTCAGTGTCGCAGATTTGCGTAAACTTGTTTATAAATATGCTGAGCTCAACAATATCAAAAACAATTTTGATCAAAGCAGCAAAACAGCTGGATTGGACTGGGTACACGCCTTTATGAGGCGCAATCCTTCAGTTGCTATACGCAAAGCTGAAGCGACAAGCTTGAATAGAATTTCTGCTTTTAATAAAGAAGATATAACACATTTCTATGAGAAACTTGGCGACTTAATGGAAAAACATAAGTTTATTCCCAACAACATATATAATGCTGACGAAACTGGCATCACCACAGTGACAGACCCAGGAAAAGTGCTCGCTGAAAAAGGACAAAGAAGAGTCGGATCTGTTACTAGCGGCGAACGAGGAAGCAACATAACAGTCATGTGTGCGATGAGTGCAGCCGGAAACTACATACCACCCATGTTTATTTTTGCCAGACAGAGAATGACGCCTTTATTAGAAAAATATGGACCAGCTGCAGCATTATACACCAACTCCAAGAATGGCTGGATAAACGAAGATTTATTTGTCAAATGGCTCAAACATTTCGCAGCATTTACTAAGCCTACCAACGAATCACCTGTATTATTAATTCTGGATAATCACTGCAGTCACATTTCTCTTCAAGCATTCAATTTTTGCAAGGAAAACCACATCACAATGGTTTCCATTCCACCACACAGTTCTCACAGAACACAGCCGCTGGATGTGTCTTTTTACGGGCCGCTCAAAGCTGCTTACAGGCACGAATGCAACAGGCACATGAAGACACATTTAATGTCCAAAATAACCCCGTATGATGTTGCAGGTCTTTTCAATAAAGCATACATACAAGTTGCGAACATAAGTAAAGCAGAATCTGGATTTCGAGCAACGGGAATTTACCCATTGAACCCAAATGTTTTCACTGAAGAAGATTTTCTGGCAGCGTCCCTGATGGCATAG
- Protein Sequence
- MPRNRQRTTAKAAWSEGDLQSAKTAIDEGLSKRKAAKTYNIPFTTLRDRLKNENMTNPRLGRKPVFTEQQETEIADQVKLLGSLYYGLSVADLRKLVYKYAELNNIKNNFDQSSKTAGLDWVHAFMRRNPSVAIRKAEATSLNRISAFNKEDITHFYEKLGDLMEKHKFIPNNIYNADETGITTVTDPGKVLAEKGQRRVGSVTSGERGSNITVMCAMSAAGNYIPPMFIFARQRMTPLLEKYGPAAALYTNSKNGWINEDLFVKWLKHFAAFTKPTNESPVLLILDNHCSHISLQAFNFCKENHITMVSIPPHSSHRTQPLDVSFYGPLKAAYRHECNRHMKTHLMSKITPYDVAGLFNKAYIQVANISKAESGFRATGIYPLNPNVFTEEDFLAASLMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114045;
- 90% Identity
- iTF_00114045;
- 80% Identity
- -