Basic Information

Gene Symbol
arid5b
Assembly
GCA_947256265.1
Location
OX366539.1:7436214-7450891[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-14 5.9e-11 43.0 0.0 3 89 234 309 232 309 0.93

Sequence Information

Coding Sequence
ATGAGATTACAAGCGAAGCCGCAGGAAAAAAAGGACGAGGTGCTGGCCATCAATGACAAGGTGGTGTTACGCGCCGACGACCTCCTCAGCTGGATCTGCGTGGGCACCGAGTGGCGCTGGGGGCTGAAGGCGGTGTGGCGCGGCGCGTGCGCACCCCCCGCCGACCAGCCGCGCCACGCCCCCCTCCACCACACCAAGCTGGACTTCAGCGATGTGGCCAGCGAGAAGAGTAGTATCGAGGAAGACACAAACGCTCCCGGTGTGGTGGTGTTCTCATACCCTCGGTATTGCCGCTACCGGGCGCTTATAGCCCGGCTGGAGGGGATCCAGGCCTCCTGGCTGCGGGACTCCCTGGTGGCAGCCCTGGGCGGGTATGCTGCGCCCACTACTAACACCAGGATCCTGTACTGCAAGGAGACGTTTGAGTACCCCGAGCTGGAAGGACACGAGTTCGTGTGTAACCACCTGGCGCCGCGGCTCAAGGGGCGGCCGCGGGGGCGCCGGCGCCGCGCGGCGCACTCGCCCTCGCCGTCCCCGTCCCCCTCCCCGGGCCGCTCGGGCCGCTCCGACACAGAGTCCCCGCCGCCCGCGACCGCTTCGCCACAGACCCCTCGACGGCTCTCCCTTCGCAACGGCGCCCCACAGCAGAGCGACGAGGATGACGAAGACTACAAGAGAGTGGAGCAGACGCCAGAAGACCGGGAGTTCCTTCACCAGCTCAAGATGTTCTACAAGAGTCGTGGCGAGCCCTTCAAGAGCGGACACACGTTGAAGCATTTCCCTGTCCCCCTGCGCGCGCTGTACGCGGCGGTGGCGCGCGCGGGCGGCTACGAGGCGGCGTGCCGGCGCCGGCGCTGGCGCTCGCTGGCGCCGCGGCAGCCCGCGCGCGCCCGCAGGCACTACGAGAGGTTTCTCCTCCCCTTCGAAAACCATGAACGTAGAAACGGCAGCTCTTTGGCTTTCAAAATCAACGGCAAAATAGACGTTGAGCCCCACACTATAGCCACCATCGACGTCACAGACTCCCCCCTCCGCGACGATGACGTCAAGATCCTCAGAACACCCTCCCCCAAACTCGAAATCTACCACCAGCTCGAAAACCCGGACGTGGACAGCGAAACTGGGGAAATAACATCGAAAGACGACGTCATAGTGAAGAATGCGGAAGAGTTGAACAGAGAGTTCCTAGAGTCTTTGCCGAAGGAAGAGAAGATTGTCAAAATTTCTGTCAAACCTGTAGAGAAGTTGATCGAGCCTAGTGCCGTGAGGTTTGGAGAGAACAATGCTGAAGTGTCCAAACTTGATTCTACCAGAGCCGAGGAGGGCAAAGATTATAGTAGAAATTACTTTGATTTGCAGAAGTTTAATATCGCGGACGCGGCGCCGGCGCCTCGCTCAGCATCCCTCAACGGCCACGCTGCGCCCACGCACCTCAAGTCAGCGCCGGGCTCGCTGCGGTCGCTGCGTGCTGTGCGCGTCAAGCCGGCGCGCGCCCCCGCCCCCGGCCCCGCAGCCCCCGCCCACGTAGCCCCCGGCCCCGCCGCCCCCAGCGTCCCCGCCCCGCGCCCCGCCACCGCCGACCCTGCACTGAACCCGCTGCGCACTGAATCAGTGTCGACATCTCCGCCGCTGGGCCTGTCGTCGGTGGCGCCCCCTATCACCAACTTCGGCATCCACCATCCGCCGCAGCAGAACAGCTCGCACGTGGACGACGATATCGTAGAGGTACCCTACAAACCTAAGACCCCAGAAATAATCGACCTCGACGAATACCCCGAAAGCCCCCAAGCAGTGAAGAAGAAGAGACTCGACATTCTGAAGGAACGGGGGCTGGAGGTGACCGCGCTGCCCCCCTGGCCGGGGGTCCCGCAGATGATGACCCCCCCGATCATGTTGAACCCGGCGGTACAACACCAGATCATGACGCAAGCGCAATTATTCCAAATGTATAATATTATTCCACCAAATTATTCGAACGGTATTCAACCCCCCAAAGTGGTTCAGGGATCTTCTATATTCGGTACCTCAGGGCCTGAGAAGACTGTGTACGGGAATCCTAAAGACCCCTTCATGCCCCCGCCTCACGTCATACATGGCGCCCCTGTCAAACCGTTGAGGACAGCGCCCCCTACACAAATGACCCCTCAAGATATTTTGGACTTGACCTGTAAGTCCGGCAGCCCCCCTCCCCAGAAGCCTGCCGTGGAAATAGTCAGAGTACCCACCTCGCCCTCCCCCAACCACACAGCTCAGAACTTATCAAAGAATTACACATTAGTTGACGGCAAAGCCGTGGTCGGATCAAATTTAGAAATAACTTTAGTCAATAAAACCCAAAGTCCGGGGAAGAATAGACCCCCACAGAAGCGGTCGAGCAACGGCAAGTTCATGTCGACGAAGACCCCCACGCCCCCTAAAGAGACCTACCCTAAGTATACCAGCCCCTCGCACACAAGCACCCATAAAAAACCCCCAATTAACATCCCCAACTACCAAATCCGGGAAGACACTCCCCCAAATCAAAGTCAGCTTCTTCAAAACGCGATGAAAAACCAGAATTTAGCTCAAATTATGGATTTGCAAAAGAATTCCGTTCCGATGACGTCATTCATGGACCCCTACATGGCTCTGTACAGTAGCTTAGCGGGACAAATGGACCCAAGACAGCTGGCGATGTACCGCGACCTTATGACCAACCAGTTTCGAGGGTACCCCGGCTTACTCAACCTGGGGGTCTCTAGTACACCTACAACGAAAAATTAG
Protein Sequence
MRLQAKPQEKKDEVLAINDKVVLRADDLLSWICVGTEWRWGLKAVWRGACAPPADQPRHAPLHHTKLDFSDVASEKSSIEEDTNAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTTNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAAHSPSPSPSPSPGRSGRSDTESPPPATASPQTPRRLSLRNGAPQQSDEDDEDYKRVEQTPEDREFLHQLKMFYKSRGEPFKSGHTLKHFPVPLRALYAAVARAGGYEAACRRRRWRSLAPRQPARARRHYERFLLPFENHERRNGSSLAFKINGKIDVEPHTIATIDVTDSPLRDDDVKILRTPSPKLEIYHQLENPDVDSETGEITSKDDVIVKNAEELNREFLESLPKEEKIVKISVKPVEKLIEPSAVRFGENNAEVSKLDSTRAEEGKDYSRNYFDLQKFNIADAAPAPRSASLNGHAAPTHLKSAPGSLRSLRAVRVKPARAPAPGPAAPAHVAPGPAAPSVPAPRPATADPALNPLRTESVSTSPPLGLSSVAPPITNFGIHHPPQQNSSHVDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKRLDILKERGLEVTALPPWPGVPQMMTPPIMLNPAVQHQIMTQAQLFQMYNIIPPNYSNGIQPPKVVQGSSIFGTSGPEKTVYGNPKDPFMPPPHVIHGAPVKPLRTAPPTQMTPQDILDLTCKSGSPPPQKPAVEIVRVPTSPSPNHTAQNLSKNYTLVDGKAVVGSNLEITLVNKTQSPGKNRPPQKRSSNGKFMSTKTPTPPKETYPKYTSPSHTSTHKKPPINIPNYQIREDTPPNQSQLLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYMALYSSLAGQMDPRQLAMYRDLMTNQFRGYPGLLNLGVSSTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00017965;
90% Identity
-
80% Identity
-