Basic Information

Gene Symbol
Jarid2
Assembly
GCA_947256265.1
Location
OX366510.1:2019816-2047258[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-19 2.8e-16 60.1 0.1 9 89 524 601 518 601 0.90

Sequence Information

Coding Sequence
ATGGCTAAACGAAAAGCAGAACCGCAGAAGCCGCCCAAGACAAAAAAAGATGATGTCGCCCCCTCGGAGTTCTCTTTAGATGATAACAGGCCATTGACATACTTTGCCAAGTGCAGCACACCAAAGCGTCCCCCTGTGCCCGTCGAGCAGGAACACAATCCTCTTGCCGAACCCGTAGCAGGACCAAGCGGCCTGCAAAGGATAGAAAATGAGATACCATCGAGCGTAAGCTCCGTGCGCGGTTCATACTATAACAGCGAGTACAATATTCATCGGTGGATGAATGACTCATTAACACCTGAGTCCCGAAGAACCGACGAACTAGAAGAGGCCGAAATGGTCATATTAGACAATGGCATGCCGTTGCCATGCCTGGCGAATCAGTGGCGAAGCGTTCAGGATGTAATAAACGCCCCTAAACACGAGCTTGACTCTCGATGCAATAAATGTAGGCCCTGCCAAAGAATTGCCAAGCTCATGAAGTTATCTAGCCTCCTTAAAACGCAGGTGAAGTTTGACTTAACAGGCACCGAACCTCTGCCTCAAAGAAGCAATCCAAATCAGGATAACGACGCCTTAAAGACTGCTGAGGCCGACCATGGTCATCTCTACTTAGATCTGCTGCCAAAACACCCCAGCTTCATGATGAAGTTGCGGAATCACATGGTGTTGGGACAACAAATACTGTCCGCGTGTCTAATACCACGTTGTGATGCGCGGATCAATAAACAGGAGTTTCTGCTGGAAGAACAAGAGCATCTCCTCGACCAGCTAATAGAAACGTTAATGCTCAGTCTGAATGATAAATCTAAAAATCGCAGGCTCACCATCTCATCATTCCGGAGTGAATATAGTGATTTTGCTATTCCAGACTCCGAAAAGGAGGAACAACAAATCCTGGCAGAGGAAAGGCGAATGCGTAAAAGGCTCAAACAGGCAGCAGCAGAAGTACGTTTGAAGGACGTGTCGGAGATGCAGGCTCTCATTAAGGCGGAGAAAGAGGCAGAGGTTTCCCGCATCGAGGCCGAGAAAGAAGCGGAGGTATTGCGAATAGAGGCGGAAAAGGAAGCAGAGGTATCACGTATTGAGGCAGAGAAGAAAGCGGAGTTGATTCGCTTAGAAGAAGAAAGAAAAGCTGAATTATCTCGCATAGAGGCAGAAGTCCGAGCCCGTCTCCGAGTGGAAGTAGAGGCCGAAGTACGAATGATGGTCGAAGTCGATCAACAGGCGAAAGCCTTGGAGGCAGAAAAAGACGCCAAGTGCGTTGATATGCGACATCCTAGGGATAGGGACAGCGGGGCCGGCGGCAGTGGCTCGCAAGCGGCAGTAGGTGGCAAAATGTTGGAGGCGCCTGTGTATAGGCCTACTCATGAAGAATTCGATGATCCTATAAAGTATTTTGAAAAGATCTGGCCAGGAGCATCAGATTACGGCATCTGTAAAATAGTGCCCCCTCCAGGCTGGAAGCCAACCAGTAAGATTGTCGACGACCTCCGTTTTAATGTGGCAAACCAATACATATCTCGGCTTTTCAGCCGCTGGGGACCGGCTACTCGGGAGCTTTGTGCCATCCGACTGTGCCTCCAGCAACAAAAAATACACTTTGCCCGTGCACCATTGCTAGAAGGTGTGGAAGTGAACTTGGGGAAACTTTACCATGTCGTGCAAAGAAATGGAGGACTCGAATCTGTAATCAATAGCAATAAGTGGGGCAAGGTAGCAGAAGAGATGAAATTCAACAAAACCCCTAACACTGAGAGGCGGTTGGACCAGATTTATGTAAAATACCTGCTTATGTACGACACACTTGCACACCATGAACGCCAGGAGATAATGAGAATTGTTGAGAAAGCTTGGCATAAAAAGAATCAAAAACTGCTTGACCGTGCTTCAAACCCGCTGCACCACCAAAAGCGTATGCTCGGATTATCACCAGAATCTGAAGACGAATCAGAAGACGAGAATACAGTGATTGCACTGAAAGAGGCCGAGGATTGTATTACCAGCGGTGCTAGTATGAACCGAGCAAAATTCAAAAGGATTGCCAGCAACGCCTATGAAAACATGATCGGAGGCCGTTCTGAGGGTGAGCCGCCGTCCCTAGCACAAATAGAAGAGCAATACTGGGGTCATGTAGTCTTGGGTTCTGAACACCTATGCGTCCATACTGCTGCGATTGATACGGGTGCAGAAGGCCACGGGTTCACAAAAAATAGGAATGAACCCTATGGACGGCACCCTTGGAATTTGAAGATGTTTAGCCAGCATCCACAAAATATTCTGCGGTACTTGGGCCCTGTACTGGGTGTAACAGTACCGACTTTGCATCTTGGCATGCTTTATTCAACCAGCTGCTGGCACAAGGACCCACACTGGCTACCGTGGATAGAATACGAGCATACCGGACCGAGTCGGATATGGTATGGAATCCCTAGCCGCCAAACAGACAATTTTCGAAAAGCAGTAGAGACACTGTGTCCAACATTTTGCCAAAACAAAGGCTTATGGTTGTCCTCTGACATAGCAATGATACCGCCGACCATATTGCGCCAGCACAATGTCTCCTTAACCCGCACCACGCAAGAAGAAGGAGAATTTATTCTCGCGTTCCCGAATGCCTACACGTGTTGCATAAGTACGGGGTACACTGAATCTGAAAGTGTATATTTCGCACCACCGTCATGGCTTGATAACCTTCCGTCCGTTTTTATGGAAGCTCGTGAGAGCTGTGAGCCGACAATGTTCTCTATGGAACAACTAATTTTCCTCATGGCCAAAGACCACCAATTGGACCTGTCATTGCTAAAAGTGGTCCAGCCAATATACGACAAAATGTTGCGCGATGAAGTAAATAATCGACAAATGCTTCAAGAAAGAGGCCTGAAGTTTGTACGTGAGACCATAAACACTTCACGACGTAATAGACGCGGCGCTGTCTGGAACGGCCGTGACCACGATGAGTGTGAGTACTGCAGGACCACCTTGTTCCTGTCCAAAGTACAGGGCTTAACTTCGAGAAATTCTACTCTGTGCTTGGAACACACCCTCAAATTATTGGACACTGATTTGTATAAAAACAGGAATGTAGCACTGCTCGAAGTACACGTCTACGTTTCCGTGAGGGAGTTGAACACTGTTGGCGATGACATGAAACGTCGGCTATCCACGACCGCCTCCTCGGGTACAACGCGCGGGCATACAAACTAA
Protein Sequence
MAKRKAEPQKPPKTKKDDVAPSEFSLDDNRPLTYFAKCSTPKRPPVPVEQEHNPLAEPVAGPSGLQRIENEIPSSVSSVRGSYYNSEYNIHRWMNDSLTPESRRTDELEEAEMVILDNGMPLPCLANQWRSVQDVINAPKHELDSRCNKCRPCQRIAKLMKLSSLLKTQVKFDLTGTEPLPQRSNPNQDNDALKTAEADHGHLYLDLLPKHPSFMMKLRNHMVLGQQILSACLIPRCDARINKQEFLLEEQEHLLDQLIETLMLSLNDKSKNRRLTISSFRSEYSDFAIPDSEKEEQQILAEERRMRKRLKQAAAEVRLKDVSEMQALIKAEKEAEVSRIEAEKEAEVLRIEAEKEAEVSRIEAEKKAELIRLEEERKAELSRIEAEVRARLRVEVEAEVRMMVEVDQQAKALEAEKDAKCVDMRHPRDRDSGAGGSGSQAAVGGKMLEAPVYRPTHEEFDDPIKYFEKIWPGASDYGICKIVPPPGWKPTSKIVDDLRFNVANQYISRLFSRWGPATRELCAIRLCLQQQKIHFARAPLLEGVEVNLGKLYHVVQRNGGLESVINSNKWGKVAEEMKFNKTPNTERRLDQIYVKYLLMYDTLAHHERQEIMRIVEKAWHKKNQKLLDRASNPLHHQKRMLGLSPESEDESEDENTVIALKEAEDCITSGASMNRAKFKRIASNAYENMIGGRSEGEPPSLAQIEEQYWGHVVLGSEHLCVHTAAIDTGAEGHGFTKNRNEPYGRHPWNLKMFSQHPQNILRYLGPVLGVTVPTLHLGMLYSTSCWHKDPHWLPWIEYEHTGPSRIWYGIPSRQTDNFRKAVETLCPTFCQNKGLWLSSDIAMIPPTILRQHNVSLTRTTQEEGEFILAFPNAYTCCISTGYTESESVYFAPPSWLDNLPSVFMEARESCEPTMFSMEQLIFLMAKDHQLDLSLLKVVQPIYDKMLRDEVNNRQMLQERGLKFVRETINTSRRNRRGAVWNGRDHDECEYCRTTLFLSKVQGLTSRNSTLCLEHTLKLLDTDLYKNRNVALLEVHVYVSVRELNTVGDDMKRRLSTTASSGTTRGHTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01377254;
90% Identity
-
80% Identity
-