Ains006376.1
Basic Information
- Insect
- Acromyrmex insinuator
- Gene Symbol
- lola
- Assembly
- GCA_017607455.1
- Location
- JAANHZ010000005.1:461540-499819[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.14 6.9 6.4 3.9 1 21 739 759 739 760 0.94 2 11 0.00073 0.037 13.5 0.3 1 21 784 804 784 805 0.96 3 11 0.00081 0.041 13.4 1.8 1 23 813 836 813 836 0.98 4 11 0.0038 0.19 11.3 0.9 1 21 857 877 857 878 0.94 5 11 0.00023 0.011 15.2 1.1 1 22 897 918 897 918 0.93 6 11 7.6e-07 3.9e-05 22.9 1.9 1 21 939 959 939 960 0.96 7 11 0.03 1.5 8.5 3.8 1 21 979 999 979 1000 0.90 8 11 0.00014 0.0072 15.8 2.3 2 21 1007 1026 1006 1027 0.94 9 11 0.017 0.85 9.3 3.5 1 22 1132 1153 1132 1153 0.94 10 11 0.24 12 5.6 2.1 1 21 1170 1190 1170 1191 0.91 11 11 0.37 19 5.0 0.1 2 14 1198 1210 1197 1219 0.73
Sequence Information
- Coding Sequence
- AAACGAGGAAACGAAGCCAGAACTACCATGGAGGACGACCAGCAGTTCTGTCTCAGGTGGAACAACCACCAAAGTACGCTCATACAAAACTTCGACACACTCCTTGAAAGCGGGACGCTGGTCGACTGCACCCTGGCGGCGGAGGGGAAGACTCTCAAGGCCCACAAAGTAGTCCTCTCCGCGTGCAGTCCATACTTTGAGTGCCTCCTCAGCGAACACTATGACAAGCATCCAGTGTTCATACTCAAAGATGTTAAATTCAAAGAACTTAAGGCAATGATGGATTATATGTACAGAGGGGAAGTAAATATTTCCCAAGACCAACTGGCAGCACTCCTCAAAGCCGCCGAGTCTCTGCAAATTAAGGGCCTTTCGGAAAGTAAAACTGCTGGCAGTAGTAAGACGGAGTCCAGGCCACAGAAAACCGTCTCACAACCAACAGCACCGTCGTTAGACATTCCACACGCGTCTTCCGGTCTGACGATAGAAAAGAACAAAGTTCCTAGGCAGAGTTTGGCGCAAAGTTCCGTGGGGGATATACCAGAGGATACGGCTAGTCCTCAGGTGTCGAAAGGGTTGTCCTCGAGGGAAGGTTCACAAAGTCCAAcatcaagaaaaagaaaaaggtttCGAAGAAGAAGTTTAACCGAAGATAGTACGATAGAAAATCAGGACGCATCGAATTCCAGCGACATGCCTCAGCAAATGGGTGTACCGGCGCTTGGTATCGCGCCAGTGGCAGACGAAAAAGTACACGCAGACCCAACAGACTCTCTCGGCAGGTCAGCTTTAATGACGCAATTGACGAAACCTGCTGATGAGATGTTACAGctgCCACTCGAAAAACCCGAGCCAAATGATAATCTCATCGAGCCAAAGTCTGAATACCTAGATGACGCTGAGGAGGGTGTCGAAGACCTAACGCTGGATGAAGATATGAATGATCTTAATGACATAGAGCAGGACAACAATCGAGCTGGACCGTCCCATGACCCTGCCCAACACCCCGCAGGTATGGGCTCATGGCATGTTACCGGTGACCGAAGTAATGCGGGGGGTGTTGTGGGCTCCGTGGCAGCTCCTGGAACGGGAGATGAGGTTTTCCTCGCAGCTCAGGAGGCTGCACAGGCTCATCGCGACTCACAAGAAGGTAATACGAAATTTTTGTCGGTTATTTCGGTTGGTTGGCAATGCAAGTTTCTTGCCGAGACGACGGAGACCAGCTTGCTTGCATCTGCTAATCTACGACGACAGCTGCACACTGAGCAGCAGCTGATGCAGCCGGATACCGGTCGCCCCAGATGGCTGAGCCGGAAATCGTCCGCCCGGCACGCCGTATCTTTCGTGATCGGCTACAAGTATCGAAGCGGTCTGCGGGGACATATCGCCGACTGTCTCtcggaaaaagagaaattggaGGCTGATTTTCGTCAACGACAGGAGCAGCGGCGGCAGCGAGAACAGCAGCAGCAGGTGCAGCAGCGACTGGAGCAGTTTACTGAGAAAGACGTCAGAGTACTGTACAAGTTTTGGAAATCaaaggggGGGTCAAAGTATCCAGGTCACACTGTCTCGACCGGAGTGACCCGCGGCTTTGCAGATAAGAGGGGCTCATTTCGTGCGTCCGACAGGAACCCGTATGATGTAAAAGGCCTCCCCCTGTATGCTTGCAGCCAGCCCCGCGAAGGAGATCGTCTTGAGTGGCGGCGACGGCGAACTGCCATTTCGCTGTGTAATGTGCGGACGTGGATACAGATCCCGATCCTCTCTCACACGACACTCCAGATACGAGTGCGGCCGCCTCGGATCCCGGTATACCTTCACCTGCACTCTCTGCGGCAAATACTTCTGCCGACCGGATCACCTCAAGCAGCATATCCTCAACATCCACGGGGGTTCCGATCAGAAAGAGAGACTGAGACCTTGCATGCTCAGGTACTCACAAAGATGAATTGCGAGACATACATTATCCGTAAGAGATCGCAAAATTTACACATTTGTTTCGTTTCGAACATGCTTGCAGCATACTGGACTGAATACTCGACGGTGCACGAGACTCTGGCCTTACAGTCGCTCGACTGGAAGAAGATATCCGAACAGCAGCATCGTcagcaacaacaacagcagcagcagcaacaattTTCGCAGCGACAGCAATCGTTTCCACAGCAACCATTGCAGGCGTCGGCGCTTGACAGTATTCACATTAGCGAGTATCGTTGCTGTTTCTGCAACAGTCCATACCCGACGACATCTCATCTGAAAAGTCATCTGACCAGAGGTTGTTTCATGGACCCAACCTTCTCGGTAGAGAAACGGCGCAGTCTCAACAAAATGGAGTCTAGAAATTATGTATGCCCAAAGTGCTCTCAAGGCTATAAGAACAAGCGTACGTTAGATACGCATCTGCGTATCGCGTGCGGCCGCGAGCCGAAATTCCAGTGTCCGTACTGCGACCTGAAGAGCAAACACCCGCCGAATATTTACACGCACATTAGACGCAAACACAAGGGGCGAACTGTTGTTGATTCTTGTGTTGCAGAATACCGCACGTCCGTCGTCCGAACTTACGCCTGTATGTACTGCAACAAGAGCTTTGTCCTTAAACGCTTTCTTTATGCCCATCTGAAGAAGAGCTGCTATTGGAATCCGAATTCCGAGTGTTATCACGCGCAGAGCTCGAAACCCTTCTTGTGTTCCAAATGTGGTGCCTCGTATTCGAAGCAGTATTTCCTGACGCAACATATGCGTAAAGATTGTGAATTGGAGCTAAGCGCGAATAATTCGACGCGTGGCGAAGGCACCAAGAGAAAGTATAGTTGCAAGTATTGCGGCAAGGGCTTTACGCAGTCTGGTCATCTGAGGAGTCATCAGAAGAGCTCCTGCTACTGGAACCCCAGGTCTACCTGCCATCAGTCACAGAAGATTAGGCCGTTCTCCTGCACACAGTGCGGCGCTTGCTACTCCAAGCAGTCGCATCTCATCTTCCATGTGAGGCATGAGTGTGGTCGTACGCAGAAGTGTAATGTCTGCGGCAAAACATTTCTGCACAGCAGCAGCCTGCGAAGGCATCGCCAGAGAGCCCCcatttgttCGCATCGTGTTACAGAGAAAGAGTCATCGCAGGTAATTGGAACGCGAGCGGAGGTATCAAAGTTATCACAGAAAGAAGAACAATTGTCATTGAagcagaaagaaaaattatcggagaaagaaagaacaagAGCTAAAGGAAGAGAAGAAGatgatttcattaataatatgcCTTCAACGAGCACTGCGCAAAGTTCTTCAAGggttttagaaatttttataaacgatAGCTCGCCTCAGATCAGCGATAATGAAAGCTCTGTGCCTTGGACTGACTCGAAGAATGTGGAACTGAACTTATACAAATGCCAGTATTGTGGCATCAGTTACAAGAAATGTAACATTCTCAAACATCACATTATGACGACATGTTTGTTGAATCCAAACTCTAGAACTATGAAGGAAGCTGGACAATTCAGATGCCTAGAATGTGGTCGTAATTATAAGGAATTGAAATCTTTGAGATTTCATCAGAAACATGAGtgccagaaaaaaataacgtgtCCAGATTGTGGCACAATTTTCATTGGGTCAGTTGTTCCGGAACGTCATAAGAAGAATCATTGCAAAACGAAGAAGCAATCCAAATTGAAGATAGAAGAGTCGCAGAGCGAACTCTTTGAAGACGACGAATTCAACATTGACTCagat
- Protein Sequence
- KRGNEARTTMEDDQQFCLRWNNHQSTLIQNFDTLLESGTLVDCTLAAEGKTLKAHKVVLSACSPYFECLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTAGSSKTESRPQKTVSQPTAPSLDIPHASSGLTIEKNKVPRQSLAQSSVGDIPEDTASPQVSKGLSSREGSQSPTSRKRKRFRRRSLTEDSTIENQDASNSSDMPQQMGVPALGIAPVADEKVHADPTDSLGRSALMTQLTKPADEMLQLPLEKPEPNDNLIEPKSEYLDDAEEGVEDLTLDEDMNDLNDIEQDNNRAGPSHDPAQHPAGMGSWHVTGDRSNAGGVVGSVAAPGTGDEVFLAAQEAAQAHRDSQEGNTKFLSVISVGWQCKFLAETTETSLLASANLRRQLHTEQQLMQPDTGRPRWLSRKSSARHAVSFVIGYKYRSGLRGHIADCLSEKEKLEADFRQRQEQRRQREQQQQVQQRLEQFTEKDVRVLYKFWKSKGGSKYPGHTVSTGVTRGFADKRGSFRASDRNPYDVKGLPLYACSQPREGDRLEWRRRRTAISLCNVRTWIQIPILSHTTLQIRVRPPRIPVYLHLHSLRQILLPTGSPQAAYPQHPRGFRSERETETLHAQVLTKMNCETYIIRKRSQNLHICFVSNMLAAYWTEYSTVHETLALQSLDWKKISEQQHRQQQQQQQQQQFSQRQQSFPQQPLQASALDSIHISEYRCCFCNSPYPTTSHLKSHLTRGCFMDPTFSVEKRRSLNKMESRNYVCPKCSQGYKNKRTLDTHLRIACGREPKFQCPYCDLKSKHPPNIYTHIRRKHKGRTVVDSCVAEYRTSVVRTYACMYCNKSFVLKRFLYAHLKKSCYWNPNSECYHAQSSKPFLCSKCGASYSKQYFLTQHMRKDCELELSANNSTRGEGTKRKYSCKYCGKGFTQSGHLRSHQKSSCYWNPRSTCHQSQKIRPFSCTQCGACYSKQSHLIFHVRHECGRTQKCNVCGKTFLHSSSLRRHRQRAPICSHRVTEKESSQVIGTRAEVSKLSQKEEQLSLKQKEKLSEKERTRAKGREEDDFINNMPSTSTAQSSSRVLEIFINDSSPQISDNESSVPWTDSKNVELNLYKCQYCGISYKKCNILKHHIMTTCLLNPNSRTMKEAGQFRCLECGRNYKELKSLRFHQKHECQKKITCPDCGTIFIGSVVPERHKKNHCKTKKQSKLKIEESQSELFEDDEFNIDSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00016759;
- 90% Identity
- iTF_00016759;
- 80% Identity
- iTF_00016759;