Basic Information

Gene Symbol
ct
Assembly
GCA_017607455.1
Location
JAANHZ010000106.1:691761-799278[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.9e-28 2.2e-24 84.3 0.0 2 72 349 420 348 425 0.95
2 3 1.2e-32 5.3e-29 99.1 0.0 3 77 750 825 748 827 0.96
3 3 4.9e-31 2.2e-27 93.9 0.0 3 75 976 1049 974 1053 0.95

Sequence Information

Coding Sequence
ATGGATTATAGCGTGAGACACGAAACGGAGGCTCGTGAGAGCAACGGAGACGGAGGTGGATTATCGTCACCCCTGCAGCGCCCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAGCAACCACCGCCACCACCTCCGACAGCAGCCTCTCTCCCTCCACGTTCCACTCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGTCTCCTCTTCCCGCCACCTCTCCAGAACGTCGAGACTTTCGGCTCGTTTCTCGGTGAAGAAATCGTAGCCAATTGGAGGCGGACATTGGAAAGGTCTATCATGAgccaacagcagcaacagcagcagcaacaacagcagcaacagcaacaacagcagcaacaatCACAGCCATCTCAACTAAGCCAATTAACTCAACAGCAACAACAATTACAACAAGCCCAACCGCACATGGGTTTACATCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCGCCGGGTGCGGATCCATCGTCCACTTCAAACACTCCGGTGAAATCGAACACACCGATCGGTACAACATCCTTGGGCAGTTTAGATGTCACTGAGAAAGCGCCAACGCCAGTATCAGGACATGAAACACCAGCCCCTCCAACACCATCCTCCACAACCGCCTTGACATCGCCGCCGAGCTTCCAGCCACCGACGTCGATGGTGGAAACTAGTACCCCTTCAGCTTCCATCAATGGCAGCGGTCTCACACCCGGCGTACCAAGTGCACCGCCCCCGAAGAGTCCGCCTGATCAAGAATCATgtcacaataataataatagccaTCATCTAGCAAATAACAATATCGGCGGGCTAAGTGTTCTCGATACGCTGAAGAGTCCGTTTCGGTTTGACGATCGAACGTATCCCTTCCGATTCGGCGACGAGTTCGGTGCCGCCGGTATGGCCGGTCGGCTGGGCGAGTCCCTCATTCCAAAGGGAGATCCCATGGAAGCGAGACTGCAGGAAATGTTGCGCCATAATATGGACAAATATGCCTCACAGAATCTTGACACTCTTCATATAGCCAGGCGAGTGCGCGAACTATTGTCGATACACAATATCGGTCAAAGACTATTCGCCAAATATGTTCTTGGGCTAAGTCAAGGCACGGTCAGCGAGTTACTTAGTAAGCCCAAGCCTTGGGACAAGTTAACCGAAAAGGGCCGTGACAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGAGAACGCCGTGATGCTGCTCAAGTCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAACAAGGAATGCCAGCATTCGCACGTGGACCACAGGATAGTGGTCCGCAAGAAATGAGTGATGAAAGATTGGCACATATTCTGTCGGAATCGAGCCATATGCAAATGAGAAGTGAGCATGAAGTATCGAACGATGCTGACAGCAAGAGTCCGAACAGAATCGGTTGCCCGAGTCCGTTCAACAAAGACAGACTGGACAGCCAAAATAGGAGActgaagaaatatgaaaaCGACGACATTCCCCAGGAGAAGGTAGTAAGGATTTATCAAGAAGAACTGGCTAAGCTGATGGGCACGAGAGTGGAGAATCTTCGTCCGCGAGAATTCCCTAGTGGTACGCAGAGCAGTCTTCAAGGCATCGAGCGCACCCAGGAAGACATTCGATTAGCATTGGACGCTTATCACCGTGAGCTCCAAAAATTGAATGCCGCACCAGGTCAGAATCCCTCGATGACTGGACTGCCAGGATTGCCTGGATTACCAGGTTTGTTGGCGCTTCAGCAACAAGCTCTTCAACAACATCATCTAGCCGCGAATGGCGGCGGTGGTGTTCAGGACTTGAGTTTAGGCAAAGTGGATCCGcgcaataaaatgataaatggtgtgtcagaagaagaaaaagagaagatgGAAGAGGCGATGAGACACGCTGGAAGTGCATTCTCTTTGGTGAGGCCGAAGCAAGAATCGACAGGTCCTCAATCGACGCCTGGCGGTTCTAGCGCAAGTTCACCGCTTGGCAATTCCATACTTCCCCCTGCGATGACACCCAACGAAGAGTTCTCCAGTGCGGCGGCAGCCAGTCCTCTTCAGAGAATGGCCTCCATCACGAACAGTCTGATAAGTCAACCGTCCACCCCAACTCATCATTCAGCCAATCAAAGACCGCTGAAAGCTGTGCTTCCTCCGATCACGCAACAGCAGTTCGACCTGTACAATAATCTTAATACGGAAGATATTGTGAAAAGGGTGAAGGAACAGCTGTCTCAGTATTCGATTTCGCAGCGGCTATTCGGCGAATCAGTATTGGGTCTATCTCAGGGATCAGTGTCAGACCTCCTCGCGCGTCCAAAACCATGGCACATGCTAACCCAAAAAGGTCGTGAGCCCTTTATCCGAATGAAAATGTTCCTCGAAGATGACAACGCGGTGCACAAGCTCGTCGCCAGCCAGTACAAGATCGCCCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCCTTGCGGAACACCTATGAAACCTATGCCACCAACAAAACTCGTCCAAGAACAGCTTCAGAACGCAGCGAAGGCGCAAGCCGCCGCTCAAGCAGCCGCACAAGCAGCGGCGCAACAGCATCAACAGGAAAATCAGATGCAACTCGGCCCGCCACAACAAAGTCCTCAACATCCACAACATCCACAACCGCCACCACCGATGATGTTGACCCCACCTGGACCTCATCATCCTCATACTCAGCTCAGCATGCAAGAACTCCAAAAGaaacaacagcagcagcagcaacaaatGTCACTACACTCGCCACATCATCAAATGGCACCGTCGCCTCTTCGAAGTCTTCATCCTCACATTTCACCAAGCGTATACGAGATGGCCGCCCTTACGCAGGATCTCGACACACAGACAATCACAACAAAGATCAAGGAAGCGTTATTAGCTAACAATATCGGCCAGAAGATCTTCGGTGAAGCGGTTCTCGGTCTGTCGCAGGGCTCTGTCAGCGAGTTACTGAGCAAACCGAAACCGTGGCATATGCTCAGTATAAAAGGTCGAGAGCCTTTCATTAGGATGCAGCTTTGGCTGTCAGATGCACACAATGTTGATCGATTGCAAGCGTTGAAGAATGAACGACGCGAGGCGAACAAGAGACGACGTAGCAGCGGTCCCGGTCACGATAACAGTTCTGATACTTCAAGCAACGACACAGCCGAATTCTATCATGCGGCATCACCTGGTCCGGGACCTACTACCGGGAAGAAGCAGCGCGTTCTTTTCTCGGAAGAACAGAAAGAAGCTCTCAGACTCGCTTTCGCCTTGGATCCTTATCCCAATGTGGCTACTATCGAATTCCTTGCTGGTGAACTGGCTCTGTCGTCGAGAACAATAACAAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAAACACCGCACGGCCAACCAGAGCCGCAGTCGCCGCGAGAACCTGGTCAACCGTTCGATCCTGTTCAATTCAGACTGCTGTTAAACCAAAGACTGCTGGAGATTCAAAAGGAGAGATTGGGTCTAGGAAATGTACCTTTACCTTACTCTCCGTACTTTAATCCCAATCTGGCGGCTCTGGTAGGTAATGCACTGAAGGAACAATGCTCTGGTCTGGACCTCTCGATGAATGCTCTAAAGAGAGAACCCAATCAAGAATTCGAAGATGAAGATGTCGACGATGCGATGAGTAATCTAGGTAGCGAGGACTCGGAAGGTTCGGCCAGTAGTATAAAGAGAGAACCTACAGAAACACCGACGGCACCCACGACGGTTAGATCCAATAGAAGAAAACCCGCGGCACCGCAATGGGTGAATCCGGAATGGCAAGAACCAACGAGAACAGGCGACGAAGTTATCATCAATGGAGTTTGTGTGATGCAGACGGACGATTATGGAGTAAAAAGAGAGGCCGAAGAAACCATAAGAGTTGAACCGACACCAGTGCAAGATCGATATGAAGAAGATGCTCAAAGTGATGTCTCTTCCGTGTCTGGCAACAATGGAGCCGATCGGGATAGTCCACTTCCCAGTCCAAAATCTGGTCAAAACAGTCCAGCGACGTCGCTCAGACCGCCGTCAGCGCAACAGACGCAACAGTCCACGGAGGAGAGTCCAAAGGACGTGGTGAAACACGAACCGGAGGAAACGTGGGATTAC
Protein Sequence
MDYSVRHETEARESNGDGGGLSSPLQRPSTASPHGVGGVPPTSHVSSQQPPPPPPTAASLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQQQQQQQQQQQQSQPSQLSQLTQQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTTSLGSLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSTPSASINGSGLTPGVPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDSGPQEMSDERLAHILSESSHMQMRSEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSGTQSSLQGIERTQEDIRLALDAYHRELQKLNAAPGQNPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPPCGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVDDAMSNLGSEDSEGSASSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPATSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00982081;
80% Identity
iTF_00016590;