Basic Information

Insect: Acromyrmex heyeri
Gene Symbol: -
Assembly: GCA_017607565.1
Location: JAANIB010003775.1:4320366-4329499[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.2 61 3.4 0.5 1 23 164 189 164 189 0.96

2 17 1.8 88 2.9 0.6 3 23 204 224 203 225 0.79

3 17 2.4 1.2e+02 2.5 2.4 1 23 231 253 231 253 0.96

4 17 0.0026 0.13 11.9 0.3 2 23 259 280 258 280 0.97

5 17 1.5 75 3.2 9.0 2 21 563 582 562 585 0.94

6 17 1.9 92 2.9 1.0 1 23 651 673 651 673 0.82

7 17 1.5 74 3.2 1.1 2 23 851 872 850 872 0.96

8 17 0.021 1 9.0 0.4 1 23 887 909 887 909 0.97

9 17 0.008 0.39 10.3 0.2 1 23 917 939 917 939 0.98

10 17 0.14 6.7 6.5 1.0 2 23 1032 1053 1031 1053 0.95

11 17 0.11 5.7 6.7 0.8 3 23 1065 1085 1063 1085 0.96

12 17 0.0026 0.13 11.9 0.2 1 23 1162 1184 1162 1184 0.98

13 17 0.029 1.5 8.6 0.3 1 23 1258 1280 1258 1280 0.97

14 17 3.3e-05 0.0016 17.8 0.9 1 23 1286 1308 1286 1308 0.97

15 17 0.0044 0.22 11.2 2.6 1 23 1371 1393 1371 1393 0.97

16 17 0.0015 0.073 12.6 2.2 1 23 1399 1421 1399 1421 0.99

17 17 1.9 93 2.9 0.6 2 23 1512 1533 1511 1533 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.2	61	3.4	0.5	1	23	164	189	164	189	0.96
2	17	1.8	88	2.9	0.6	3	23	204	224	203	225	0.79
3	17	2.4	1.2e+02	2.5	2.4	1	23	231	253	231	253	0.96
4	17	0.0026	0.13	11.9	0.3	2	23	259	280	258	280	0.97
5	17	1.5	75	3.2	9.0	2	21	563	582	562	585	0.94
6	17	1.9	92	2.9	1.0	1	23	651	673	651	673	0.82
7	17	1.5	74	3.2	1.1	2	23	851	872	850	872	0.96
8	17	0.021	1	9.0	0.4	1	23	887	909	887	909	0.97
9	17	0.008	0.39	10.3	0.2	1	23	917	939	917	939	0.98
10	17	0.14	6.7	6.5	1.0	2	23	1032	1053	1031	1053	0.95
11	17	0.11	5.7	6.7	0.8	3	23	1065	1085	1063	1085	0.96
12	17	0.0026	0.13	11.9	0.2	1	23	1162	1184	1162	1184	0.98
13	17	0.029	1.5	8.6	0.3	1	23	1258	1280	1258	1280	0.97
14	17	3.3e-05	0.0016	17.8	0.9	1	23	1286	1308	1286	1308	0.97
15	17	0.0044	0.22	11.2	2.6	1	23	1371	1393	1371	1393	0.97
16	17	0.0015	0.073	12.6	2.2	1	23	1399	1421	1399	1421	0.99
17	17	1.9	93	2.9	0.6	2	23	1512	1533	1511	1533	0.96

Sequence Information

Coding Sequence: ATGTTTCCTGCGGCAGGCAAGGGCGAGCGAAGAAGTTTGCGCGGAAGCGCGCGGCTCTCGTCCAAGATGTCGGGAAAGCTGCCCCGGTTGCGTGTATTACGACCGCGGCAGCAGCACCAGAGGCGAGCGAGAACAACGGAgcccgtcgccgtcgtcgacGCCGCGACGTCCGCGACGCCGAGACCGGAAGGTAACCTTAAAGGAGCCGTAGCGAGTCACGAGGTGGAACACGATGCGAAGAGAAACGATGCGAAGAAGGGCGAAGACACGTTCGCGTCCGGCGCTATGACTGCTGATACTGCTGTGAGCAAGACGAGCGAGATGGACGAGGATGACAACGACAGCGAGCTGACGATGACCGCCGTCGACGAGGAGGCGACAACATCGCTGGACGGCAACATTGACATTgacgtcgacgtcgacgtcgacATCGCCGTCGCGGTGAATTCCGAGGAGACGATCAACATCGACACGAACGAGCGAGCGTCTTACGAGTGCAAGACCTGCAAACCACCGAAAATGCTGTCCAGTATCAAGGCCTACTTCGAGCACCTGCGAAAGGACCATAAATATAAGgGCAAAAATGAGCACAGTCCAGTTGAAAATCGTTGCCCTGCGTGCTCGTATGTTGCATTGAACGTGAAAGATCTTGAAAATCACCAAAGAATGCAtcatttgaaaagaaaattctttcgaTGCGCAAAATGCGATTACGTGACGCATATCAAAGCGCGTTATGCTAAGCATGTTAAATATCATTCTATGCCGATGATCAAGTGCGATGCTTGTGATTTTAGTTCAGCGTATAAGTGGAATCTAGATAGACACATGCGGAATCATGGAGGTGGAGGTGCTTTCAAATGTCGTGCATGTAATTTTACTGCTGATATCCGTCAGAGCTTAACGGTGCATGAATCGTATCATCATGACCCACCTGTGGGTCAgatcaacaaaaataataacgatttCGAACGTAAGCCACGAAATAGTCCAAGACGTTATAATCAGGTTGGAGCCAGTGACTTTCGAGAAGCGTTGCATAAAAGTGGAAGTACAACCACATCAGCCGCTTCTTCTGACTCGTTCGTATCAGatcattcattaatttcaatagaCGATAAGAAAAGCGCCTTGGCTAATGCAGAGTGCATTGCATTAAAATGTGAAGAAAAGGGCTGCCAATTTATAACAGCTTGGGATTCCGAGATGCAACGCCATTTAGCAGAATGTCACGCGCCAGTTATCTCATCAAAGCCAAGAAAGCCACTGCCGATGTTAATTCCACTGAGCCTAGCGACTACCAAGTCCAATAACACTTTCAACAACAGCGGACCATCTACAACCCTGCTGAAAGTTCCACGCGTTAGAGTGAGACCTGAATTGGCGCAAATTGCGAAAGAGACGGAACTCGCCAAGATGTACGGAAACAAGGGGGCCGCGAATTCGAAGAGGAATCTCAATACTGTGACTGGTGTATTTGAGAGAAAGAATGCCTCCTTCTTCGataaattaaaggaaaaaCTAACAACGACAGCGACGTCGATTAATAACAGTGTGCCAGAGGTAGCTGTAAGTAATGAGAACGACTTGAAATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAAGAGCTAACTTGCCACAAACAGACGCATCACACTGCCCTCAGCGTGTCCGTGGGCACGACACGTTGCCCTAAGTGTAGAAGACGGTGCAAGAGTACAACCGATCTCCAAATGCATATGCAATGCTGTCATTCGCGTGACGACACGACGCCGTCCATCGATAGTAGTTTAGAGAAAGTAACGAATCGCTCGGACATCCGCATGATCTCGTACCGTGACGAATTCTCTTTTCCATCGCAAATGGAATGGGATGCCAATCTCAGAGGATCAAATTTTTCTGGACCTCCGTTTGAAGGTGGTCCGACACATCCGAGCAAGCGGCGAGTATTCAAATGTCCCCATTGTCCATTTTGGGCTTCCACCGCAAGTCGCTTTCACGTACATATAGTCGGTCATTTAAACCGGAAGCCATTCGAGTGTTCAATGTGCGCGTATCGTTCTAACTGGCGATGGGACATCACAAAACATATTAAGCTTAAAGCGGCTAAAGACGCAGTGCATACGAGAGCCAGAGTGCTCATGACGGATGAGACAGGTCGACGGAATTATtccaaatataacaaatatctcGCACAGGTAGAACAGCAATCGTGGGATGAGGATCATATGGAGCAGCGCAGCATAGAAGAAGCAAATTCTGAAGAATTGTCATCAAAGTTATTGATTGTGGGCAATAAAGAGTATGTTCCGATGACTAGTTCAGCACCACAATCTCCCATCacaattttatcaacaaaCGAGACTAATCAAAATAGTCATACTGTAGATAGGCGAGCTCCACCACCACTCAAAGCAGCGGTTAGAAATCGCGGGcaatctttgttaaaaaacaaTCCTATCACGATGCATGTACAGACTTCTAGTGGTGGTGGTGCGGTCTCTATATCTACAGCAATAGATGAGAGTAAACGCACTCAGAATCAGTGGAGGTGCAAACGTTGTAATTATCGAGATAGCaacaaagataatatattgttgCATGTTAAATCTCATTACGAATCTACCAATCAGGAATCTGTTGAAGAAAGAAATCCATTTAGTTGTGAGGAATGTCCGTTTTCGGCATCGGATGCTGCCACTCTGTCCATTCACAAGAAGCACCATCGGCCGAACTTAGATGCTATATTTAAATGCTATCTTTGTCCATACTACGTTAGTACAAAGGCAGAACTGTTGGAGCACGCTAGACTTCACGGAGAAGAATTGGCAGCTATGCATCAACAGAATATGGATTTCCCATTATCCAGTCCCAAGAGTAAACAGCCACAAATATCAATTTCTGAAGGCaGTACTTCTCGAACAAAAGACGAATCGTCCATCGAACAAGTGATTCAGATAACATCACGTAACAATGTAACATCTCCAAAAATCACAGGATCTCTGCCGTCGCTTCTTTTGGACACTCGTGCTCTTCCGGATGCTCCACTGGTTTGGGTATCACGACCAGATGGCACACTAACGAAGATGCTCAAGTGCCGTCATTGTCCGTATATTTCATCGCGACGTGCGGAAGTGCGCGACCATGAGACAATGCACGTAGACATGCCAACTCAGGGTCCCTTGATTGCCTGCACCGATTGTAGCTTTACTTGCACGCGTCGGGAAGTCATGATCGCACATACAGAAATGCATACAGGATCTCTCGGTACTGTGCACTGTCTTTTCGATCAAACGCGACCTGATTCTCAACAAGTGAGTGATCTGATCACTCTACTTGGCTTGACGCACACTCCCATGCTAGGCACCGAGCCTGATCTACAGGATTCTCGTCTGGTGCACTGCTGCGGCAAATGTCCAGCACGATTTCTATGCGAAAAGGAGTTGCGTATCCATCTGCGTTACCATACCACATTATTAGCATATTCATGCCAATGGTGCTCGTATGCAGCGCGACAACCGGCGCACCTGTTAGCTCATCAAAAGGCGCACTCATCAGAATATCAAGAGCGTACCAAATATCTATTGACCTTGTACGGCCACTCGCAGCGTTATCCACCGCCCACGACAGCGTGTGTTGAAGTGGAGACTCGAGAAAACAATGACAGTGCGCTGAACGTCGCGTGGATTGTTGTTgaaatcaatgaaaattcAAACAGTTATAACAATGTCAATGGCACGACGGAGACCGTTCAAAGGACCGGTCAAGTGTTTACGTGTGCTAAGTGTCCGGCTCGTTATTTCAAATTGGATGCTTTGGAGTACCACATGACGCTTCATGGTTCAAACAATCGATACAAATGTAATGACTGTGATTATTCATCAAAAAcggaacaaaatttattaaaacatcagGTAGTACATCGACGACATAATGAAACCAGTCAAGCAACTGCGGAGCTGTCATCTACCATAGATTCCGCTTCAACATCCTCTCCTGGATCTCCACTGCAGTCACCTCCGGATCCACAATTTGGTGTGTTTATGCGCGGCAATCCTAATTTTGTTTATCCAGGTTACCTACGGAATGGTCGTCTGAAGGAAAAACGTTACAAGTGTCACAAATGTCCATCCGCTTTTGAAAAGCGTGAACAATATAGAGTTCATCTGACTTTGCATGGGGCGAAACAACGCTATCGCTGCACTACGTGCGACTATTCGGTCAAATATTATGCCAATTACGTACAGCATCTGAAGAAGCATCAGGCAAACGCAGAAGCACAGGCATCTCGGAGACAATTTGAGGATGATCGGATTTCAATCGATAGCGATAGCACTGACGTTGTATCGGCATCATCACGTAAGTCATCGAGATCATCTGCTGCTGCTAATATGATCGCATTTTCTTCCGCTAATAACGCGTCCAATAACAATGCTGCGCTACAACCTTCTAATCAGGATAAGCAGAGTTTATTGTTAATGCAAAAAAAGGGTATCATTTCGTCAACGGGCGACGCCGATGTGGAGATGATTCGCTGCCAGAGCTGCCCGTTCTCCACCATCGATAAGGATGTCATGGATTCACACAAGCGTCGCCATGGTATTGAACGCATGACGCCGCCGTGCCCGCATTGCGATTACATTCCGCGAAAAGACGAAAACGTCGGTGAACATATTAAACTGCACTTCACAAGACTGTACAAGCCTGAGTCCTATCTTATTGTCGAAATGCTGACGCTGACAACGGAGAAAATATCTGCGAACAACAAAAATGATAGGGGTCAACGATTGAAGGAACTACTGTTCAAGGAATGCGCCGATGGTAGATTCCTACCGCTCACCGAAACGATTAACACTTATACTTTAGGTACCTCCTCTTCAAAAGTAAAAACTGCCAAGGAGAAGATTATTATAGATTCAAACACAGGCGAGACCAAGCATCGTCTTGCCACG
Protein Sequence: MFPAAGKGERRSLRGSARLSSKMSGKLPRLRVLRPRQQHQRRARTTEPVAVVDAATSATPRPEGNLKGAVASHEVEHDAKRNDAKKGEDTFASGAMTADTAVSKTSEMDEDDNDSELTMTAVDEEATTSLDGNIDIDVDVDVDIAVAVNSEETINIDTNERASYECKTCKPPKMLSSIKAYFEHLRKDHKYKGKNEHSPVENRCPACSYVALNVKDLENHQRMHHLKRKFFRCAKCDYVTHIKARYAKHVKYHSMPMIKCDACDFSSAYKWNLDRHMRNHGGGGAFKCRACNFTADIRQSLTVHESYHHDPPVGQINKNNNDFERKPRNSPRRYNQVGASDFREALHKSGSTTTSAASSDSFVSDHSLISIDDKKSALANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVISSKPRKPLPMLIPLSLATTKSNNTFNNSGPSTTLLKVPRVRVRPELAQIAKETELAKMYGNKGAANSKRNLNTVTGVFERKNASFFDKLKEKLTTTATSINNSVPEVAVSNENDLKCWCTFKASSMEELTCHKQTHHTALSVSVGTTRCPKCRRRCKSTTDLQMHMQCCHSRDDTTPSIDSSLEKVTNRSDIRMISYRDEFSFPSQMEWDANLRGSNFSGPPFEGGPTHPSKRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSMCAYRSNWRWDITKHIKLKAAKDAVHTRARVLMTDETGRRNYSKYNKYLAQVEQQSWDEDHMEQRSIEEANSEELSSKLLIVGNKEYVPMTSSAPQSPITILSTNETNQNSHTVDRRAPPPLKAAVRNRGQSLLKNNPITMHVQTSSGGGAVSISTAIDESKRTQNQWRCKRCNYRDSNKDNILLHVKSHYESTNQESVEERNPFSCEECPFSASDAATLSIHKKHHRPNLDAIFKCYLCPYYVSTKAELLEHARLHGEELAAMHQQNMDFPLSSPKSKQPQISISEGSTSRTKDESSIEQVIQITSRNNVTSPKITGSLPSLLLDTRALPDAPLVWVSRPDGTLTKMLKCRHCPYISSRRAEVRDHETMHVDMPTQGPLIACTDCSFTCTRREVMIAHTEMHTGSLGTVHCLFDQTRPDSQQVSDLITLLGLTHTPMLGTEPDLQDSRLVHCCGKCPARFLCEKELRIHLRYHTTLLAYSCQWCSYAARQPAHLLAHQKAHSSEYQERTKYLLTLYGHSQRYPPPTTACVEVETRENNDSALNVAWIVVEINENSNSYNNVNGTTETVQRTGQVFTCAKCPARYFKLDALEYHMTLHGSNNRYKCNDCDYSSKTEQNLLKHQVVHRRHNETSQATAELSSTIDSASTSSPGSPLQSPPDPQFGVFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCTTCDYSVKYYANYVQHLKKHQANAEAQASRRQFEDDRISIDSDSTDVVSASSRKSSRSSAAANMIAFSSANNASNNNAALQPSNQDKQSLLLMQKKGIISSTGDADVEMIRCQSCPFSTIDKDVMDSHKRRHGIERMTPPCPHCDYIPRKDENVGEHIKLHFTRLYKPESYLIVEMLTLTTEKISANNKNDRGQRLKELLFKECADGRFLPLTETINTYTLGTSSSKVKTAKEKIIIDSNTGETKHRLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00127818;
90% Identity: iTF_00181621;
80% Identity: -