Basic Information

Gene Symbol
Ncor2
Assembly
GCA_017607565.1
Location
JAANIB010001622.1:467723-481628[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-15 6.2e-13 47.7 0.4 3 45 174 216 172 217 0.95

Sequence Information

Coding Sequence
ATGCCCGGGGATTCGTTCCGTCATGCCGGTCAACGGGTGGTGATAGCGGGATATGATGAGAACGATGCGAACGGGGTGAACGGGGAGGGTGGCAAGCAGATAGGATCTCACGCTTGCACGGTGTGCAAAAACGTCGTCGAGGGAAGCGCGCATAGTCGCGCGTTACCACGTAGTCAAGCATCGCAGTACGGCCTACGGGAAGATCAAGTACCTCCTGGTGCGCGTGTCTGCAACACTTGCCGCTGCAAGGCCGTCCGAGGACGTTACACCGCCTGCCCGCTACCGGGCTGTCCGAATCTGAGCAGCTCTAAATCGAGAGTGAAACGGCTAAGAGCGTTACCTTCCAAGTGGCTTGACTTGCCACCGGAAATTCGGGAGCCAATCGCTCAAGAATTTCaaataccAAACAGCGCGACGAAATGTTGCTCGGCTTGCTTCAGCCGCATATCGCGCCGTTTGGCACCGCATCTCGCCGGTGGTACCGAAGTATCCGAGGATGGCACCGATGCTTTATCGCGTCAGTGGACAGACGAGGAGCTCGAACAACTCCGCAGGGCACTTCGGGAACATGGCACCAATTGGCCGAAAGTCGCCGAACAGATACCCGGCAAAACAAATCATCAGTgcaaaaactattattttgcTTACCGAAAGAAACTGAGCCTCGATCAGGTAGTTGCCGAATACTATGCCTCATTGGGGGAAGAACGGAGACCGTGTTTAACTGACGAGGAAGAAAGTGGCAGTAGCACTAGTAGTTGCGATGAGCTAGCTGTTCATGATTCAAGTGATACAGCCAGCGCAGGAAGTCCGGCAACGACTATGACAGGCAGTAATGTAGCATCGAGTGGTACTGCGGCGACATCGTCGTCATTATCGATGTCTTTCCGATCCAATGAGCAAAAACTCGGCGAGAAACTCTCGGATATAGCCGTAGTATCACTTGTACCGCCCGGATCGTCTCAACAGTCTTCCAGCAGTGGAACTACTACTGTTACTTCAGGTGGCAGGGAAGATTACGACAGTTCTGCCACGGAGACAGCGGACGAAGGTCAGGGAGGTGCTGACATGGATAATAGCAGTGTCGTGGTGACTCTGACAACCTCCAACAGTAATATAACAGCGTTGCAACAACATCCGCAACCACCACCGATTGTTCATTCACCACCTTCAACAACGAGTAATTCCAATCCACTCACTGTCAAGGATCTCATGCTTGGAGTCATCGAGATGCAATTAAAACGTACTCCCAATAGTCCAGCCGACGGTGGTGGCTCGTCAGCACCCAATAGTTCTGGCAATCCGACGATATCTAGTATTTTGAAGACAGATCATCGTAATGACATAACATATGTTCGTGGCTACAAATCGTCGTCAAATATAGCAAATACTACGTTGTCTAATAGAGGAGATACAAATCTAGCCACGCTCTCCGTTGTCTCGGGACCTCATCATGCTCATCGTTCTGCTCCAAGTCCACAACCAATTGGTCAAATGCAAGCTACTATCACTCCTTGCCCACCAGCAGTACCGAGTAGTCAAGCTTCATCTTCGGACTTGCTGCCTAAGGAAGGTTTGGTTGTCATGCAAGTGCAACAAGCGTTGCGAGAAACGGAAGGAACGTTGGATTTGAGTATCAAAAAACCAAGATTACAACAAGATTACAATCATTCAATGCAGCTTCACAAGCCACCGACAGTTACGCTTTATCGGCCGGAACCGCCGGGCGCGTATTATCATCCTCACGCGCCTCATCCCGAACAAGGTCGTGGCGCGAAAAGTCCATTGATTTATGCTTCGTCACCGCGACCACAAGCACCTATTACACCTAAGATGAACAAAGTCACCGTACCACCGCCTCATCCCAAGCTATCTCCAAAATTAAGTACTATAGCCACGCCGGGTCACAAAGGTGGTTCCATCACGCATGGCACGCCTGTATCCACGGCGCGTTACGAAGGTTTGTTGCGGCAAATGACGCCGCCTGGTAATCCAACGGTTACTGGTGCTGTTCCGAACGCTAATGAACGAGGCGgtggcggcagcggcggcggcggcgccATTAATGCCGGCTCCGCTGTACCAGGGACTCCGAAAGATACAGGTGGTTCAATTACACAAGGTACACCGGTGCTTCCGTTCGCGGTAGACAAACGCGGCACGCCTATATATGATTATCATCGTACCATCCGACATTCGCCTGTAACGGGCGGTGGCAATGTTCCACCCCCACCGCCGGGACAGGGTCCTACAAGTCAGGCGGCATCGCCAGCCGTGGTAGTGAGTCATGGTGGCAGTCAGTACAACTCTTATTCTGCTGCCGGGCGGCCGCCGCCCAGTTATTCGATGGAGCAACAATTATCCAGCCGACAGATCATCATGAATGACTATATTACAAGTCAGCAAATGCATGCGCGTGCTCGTGGTAGCGGTAGCACTGGTGCATCTGTTGCTGCTGAGACGACCGGTAAGAGCGAACCGCCACCTCCACCGTCGTCTACTCTCTACTATACTGGTACGCCTCCTCCATCACAAACACATACGCAACCGCGACAAGGTGTTATCCAGAGGCACAATCCGCAGAAGCAAATGCACTATCCACCACCACCACCTGGCCTGGAGGCGTTCTCCAGTTTAGTGGATGTGGCAGTACAACAACCCAGTCTTCCGGTACCACATCCGCACGGCCATCCAGCTGCATCCGGTAGTGGTGGTCACGAGGGTCTCGGCAAAACGATGGCAGATCGCCTGTTAGCCGATCGTTATGACAATAACCGCGCGTTTCGCGAGCAAGAGATACGGCTACAGGAACATCGTATGGCGGCAATGCAGGCTGCAGAACACAGACTAGCAGTGGCTGCAGCGGTGCAGCAGCATCATCATCGTGATCGAGATAGAGAACGCGACCTCGTTCATCTACGGGAAAAGGAGGAACATCGTTTGCATCGTGAAAAAGAATTGCAACAACTAGAGCACCGTCTTGCAGTCCAGCAGCACCATCAACAACGTGAAAAAGATCTCCAGCAGCAAGAGCACCGTCTCGTGCAGCAGCGAGAGAAGGACATGCACGTCGAGCACGCTCGTTTGTCTGTGCAGCAAGCACGGGAAAAAGATATACAACACGAACATCGACTTAGCGTACATCAACAGCGAGAAAAGGAGATACATCAAAAAATGGTGGCAGCTGCCGCACAACGTGAGATTGAGCATGAGCATCGACTTGCTgtacaacaacaacaacaacgcGAGAAGGAGATGCAACAACAGGAGCGGCTTGCCATTCAGCAACACGAAAAAGACGTTGAACGTCGCCTGGCTATGCAGCATCGCGAAAGGGATCTGGCGCATCTTCAtcaacaacagcaacaacaacaacagaTCCAGCAGCATATTCAGCAACAACGTATGGAGGCCGAGAGAAGACACATTGCGCAACTATACAGAGATCAACAGCAAATCGATAGAGATTCGTCGAGATTAGCAAGCCTCGGATTTTCCTCGCAACCTTCCAGGCTTCAACAATCTCAACAGTctcaacagcagcagcagcagtcATCGACGTCATCGTCATCTTCGCGACAAAGTCAATCTTCCAGTCAGCAGAATGACTCGTCGACTCTTACAGCCGCCAGTTTAATTGACGCTATCATCACCCATCAGATCAATCAGAGTGTCGAGAATCCCGGTGCAAGCGGATCGTCAGTCAATCAGCCAGCACGTGCTGGCGATCGTCTTTTTCAGGGATTTCATCGCGAAAATCAGCAAGAACCTAATGGCATAGCTCACAGTCCTGCTGGTGAAGGCAGCGGTGGTGGAAATGGTGGAAGCGGTAACGGAAGTGGCGGCAATAAAGCAATTACTCTCGGCGAGCATGTTGATCATATTGTCTCTAAAGATTATGGCCCGCCTCATTCGTCGTATAGATCCTACGCTGGATATCAAATTTCCGAAGATCAATGGAAGAGACGAAAACATAATGAGCCGGACTCGGTGAAGACTGGGGACGAACGACAAATAATACGTGTTGCGCAACAGCAGCATacacagcagcaacagcagcatcAGTCATCGGGAAAGCAGCAATATCATTCGGTCGAGCCAGTTTCGCCGCCGGAAGCAACTACCAATCATTACGCACGTCGCTTGTACGATTCGAGCACTGCCACATCCACTTCCGGGACTCCCTCCAACAAGTCGCATTCGACGCCGTACGACGTGTCGCCATTCGATTATGTGAAAAACAAGATAGTTGAGGTGATGCGCACTGAGGACGACAAGGccggtggtggcggcggcgatGGTGGTACGGGCGATAGAAACGGAGGCGGTAATTCCGTCGTTGTGTCTGAGAAGGATGAAAAGGGGGTTGGTGCAGAGAGAAGCGTGGAGAGAAGCCCATCGAGTGGCGGTGGTGGTGGAAGTGGCGGTGGCGGTAATAGCGGAAACAATGAGATGGTGGTCGACAATACGGGTGGACCGAATCCAACCACTCGTGAACAACCACCGCCGCCTCCTGCGCCCGCAGCTACTACCACGTTTTATCCATTTAGTGCGTTAGGAGTGCACACAGGACCACCTCCGGCCCCGCCACCCGCCTCAGCTACATCCGCCTCCGTGGCAAAATCGGAACAGATGCAAGCCGAGCCGGCGCCGTTGCTTTCCTCGCAATACGAGCCGCTCTCGGATGAGGAT
Protein Sequence
MPGDSFRHAGQRVVIAGYDENDANGVNGEGGKQIGSHACTVCKNVVEGSAHSRALPRSQASQYGLREDQVPPGARVCNTCRCKAVRGRYTACPLPGCPNLSSSKSRVKRLRALPSKWLDLPPEIREPIAQEFQIPNSATKCCSACFSRISRRLAPHLAGGTEVSEDGTDALSRQWTDEELEQLRRALREHGTNWPKVAEQIPGKTNHQCKNYYFAYRKKLSLDQVVAEYYASLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPATTMTGSNVASSGTAATSSSLSMSFRSNEQKLGEKLSDIAVVSLVPPGSSQQSSSSGTTTVTSGGREDYDSSATETADEGQGGADMDNSSVVVTLTTSNSNITALQQHPQPPPIVHSPPSTTSNSNPLTVKDLMLGVIEMQLKRTPNSPADGGGSSAPNSSGNPTISSILKTDHRNDITYVRGYKSSSNIANTTLSNRGDTNLATLSVVSGPHHAHRSAPSPQPIGQMQATITPCPPAVPSSQASSSDLLPKEGLVVMQVQQALRETEGTLDLSIKKPRLQQDYNHSMQLHKPPTVTLYRPEPPGAYYHPHAPHPEQGRGAKSPLIYASSPRPQAPITPKMNKVTVPPPHPKLSPKLSTIATPGHKGGSITHGTPVSTARYEGLLRQMTPPGNPTVTGAVPNANERGGGGSGGGGAINAGSAVPGTPKDTGGSITQGTPVLPFAVDKRGTPIYDYHRTIRHSPVTGGGNVPPPPPGQGPTSQAASPAVVVSHGGSQYNSYSAAGRPPPSYSMEQQLSSRQIIMNDYITSQQMHARARGSGSTGASVAAETTGKSEPPPPPSSTLYYTGTPPPSQTHTQPRQGVIQRHNPQKQMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHGHPAASGSGGHEGLGKTMADRLLADRYDNNRAFREQEIRLQEHRMAAMQAAEHRLAVAAAVQQHHHRDRDRERDLVHLREKEEHRLHREKELQQLEHRLAVQQHHQQREKDLQQQEHRLVQQREKDMHVEHARLSVQQAREKDIQHEHRLSVHQQREKEIHQKMVAAAAQREIEHEHRLAVQQQQQREKEMQQQERLAIQQHEKDVERRLAMQHRERDLAHLHQQQQQQQQIQQHIQQQRMEAERRHIAQLYRDQQQIDRDSSRLASLGFSSQPSRLQQSQQSQQQQQQSSTSSSSSRQSQSSSQQNDSSTLTAASLIDAIITHQINQSVENPGASGSSVNQPARAGDRLFQGFHRENQQEPNGIAHSPAGEGSGGGNGGSGNGSGGNKAITLGEHVDHIVSKDYGPPHSSYRSYAGYQISEDQWKRRKHNEPDSVKTGDERQIIRVAQQQHTQQQQQHQSSGKQQYHSVEPVSPPEATTNHYARRLYDSSTATSTSGTPSNKSHSTPYDVSPFDYVKNKIVEVMRTEDDKAGGGGGDGGTGDRNGGGNSVVVSEKDEKGVGAERSVERSPSSGGGGGSGGGGNSGNNEMVVDNTGGPNPTTREQPPPPPAPAATTTFYPFSALGVHTGPPPAPPPASATSASVAKSEQMQAEPAPLLSSQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01408126;
90% Identity
iTF_00014654;
80% Identity
-