Ahey006365.1
Basic Information
- Insect
- Acromyrmex heyeri
- Gene Symbol
- bab1
- Assembly
- GCA_017607565.1
- Location
- JAANIB010007973.1:2670808-2676623[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-18 3.5e-15 54.5 0.0 1 43 95 138 95 140 0.95 2 2 0.61 7e+02 -0.9 1.5 6 15 218 227 216 231 0.82
Sequence Information
- Coding Sequence
- ATGGacgatcaattaataaaagaatcatGCAATAATGAGAACATTTATTCATCCCTGAATCCCTTGCCTTCCCCCTTTATTTCCTTCCTCCTCCCGCTCTTAAACTGGTCGATCGCCTCGACTAATAGCTGCTTTTCTGTGTTTTCTCTTTTCCACGGGGGGCGTTTACTAGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAGAGTCTGGTGCACAATCTGCGCTTCCGGGAACGTGGACCCCTCAAGTCTTGGCGGCCAGAGACTATGGCGGAGGCGATCTTCAGCGTACTCAAGGAAGGACTCTCCCTCAGCCAAGCGGCAAGGAAATACGATATCCCTTACCCGACGTTTGTCCTGTACGCGAATCGAGTACACAACATGCTGGGTCCTAGCGCCGACGGCGGGGCCGATTTGCGCCCGAAGGGACGAGGACGACCGCAGAGGATTCTGCTGGGTGTCTGGCCAGACGAGCATATCCGCGGTGTGATTCGCGCGGTGGTATTCCGCGATGGACACTCGCCACACATCGTCAAGGAGGAGCCGACCACGATGTACCCTAGCCTGGCGAACTACGCGGCTTGCAATGGCCCGGAAGGCGCAGTCAGTCCGGGTGCGGCAGCTGCGGCTGCGGTCGCGGCGGTCGCTCAAGGTAACGGCAACATCagattttctcatttttttcccCCTTTCTTTTCACCTTACTTTTTCCGAGATCAA
- Protein Sequence
- MDDQLIKESCNNENIYSSLNPLPSPFISFLLPLLNWSIASTNSCFSVFSLFHGGRLLADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTTMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGNGNIRFSHFFPPFFSPYFFRDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -