Basic Information

Gene Symbol
ARID5B
Assembly
GCA_017607565.1
Location
JAANIB010006833.1:1267765-1277645[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-23 2e-20 72.1 0.0 1 89 174 260 174 260 0.95
2 2 3.2 4.2e+03 -2.7 0.1 6 33 619 647 614 648 0.82

Sequence Information

Coding Sequence
ATGCCGCAGCCGCAGGTGCTGACGGATCCGGGGATCGATTTCTCGGACGTCGAGAAACAGCAGAAGGAATACGAAAGCAATCTGAACTCTTTGAAAAGACCGGACAGCTTCCAAACGAAGGTGGTAGTACTCTCATATCCTAGATATTGCCGCTACAGGGCACTTCTACGTAGACTCGAAGGTGCCGAGCCCTCCTGGCTGTGCTCGTCCATCGCGGCCGCGTTAGGAGGCTTCACTGCGACGCCAGGCACCAAGGTGCTCTTCTGCAGAGACACATTTGACTATCCGGATCTCGAGACTCATGAACTGCTGTGTAATCACTTGGCGCCGAAATTAAAAGGTAGACCACGAAGAAAGCGTAAAAAGCGCAGCGCTTCGCCAGGCGAATCCTCGAACGAGAGCGAAGCCTCAGTGGCGTCGACGTCGAAGAGTACGTCGGCGATCACCAGCCTGGTGATACCCACGGTCGGAAGGCCGCCCTCGTCCGGGATACGGCGGAGCGAGAGGAAAACTAGCGCGGAAGAAAAGAAGTTCATCACTGACGTGCAGAGTTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTCCTGTTCTATACAAAAGTGCAAATGCTTGGTGGTTATGACTCTGTTAGTGCTGGGCGCCTTTGGAAGACTATATACGATGACATCGGTGGTAACACGGGTTCTACTAGCGCAGCAACTATTACACGTAGACACTACGAAAGATTGTTGTTACCTTACGAAAGGTATCAGCGAGGCGAAGAAACAAAAGTGAGACTGAATCTCGGACGACGTACCAAGAGTATGAGTGCATCCGAAGATTTAGACATCAAGGAGGAATCGAGCGAGTTCTATATGTCGGAAACACCTCCACCAATAGATGTAATTCCTGCGACCACAACACCACCCTTACAACCAATAATGTCAGCAACAACAACGACTTTACTCTTGAGTGAGAAACCCAAAGCCGAAACTGGCAAGACATCTTCGTTACGTAGCGTGCGAGTGAAGCCGGAACGTCTGAAATCTTTGAATACAATAATCGCCAATAATGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATACATCTATCTCGACGCCCAATAGCACACCCTCCACAACACCGACGAATGGTACCAGTAACAATCAGAGTGTCTTGGAGAGGCAGCTCAACAGTCCTTTGATATCCCAACAAGTTCCACCATCGTGTTCGCCACCAGGCTTGCCTGTGACTAGTGTAGCGGCAAACGCGTCGACGGTCGTCACTCTAACGCCTCCACCTGAGAAGGATATGAAGGAGATCAAGTTGGATCCCAAGCAAACAACTTTACTGGCACAAGGCAAGGAAAATATACCACTATTCGGCGGCGAGAAATTCGCGGAAAAGACGATAATGCCACCAGTCTCCAGATCACCTGAAGTGATCGACCTTGAAAACGAGAACGACACGAGTCGAGACAAAATAATCATTCCCAGCTTTAAGAAACGTAAACTCGAGATTTTGCGTGAAGGCGGTCTCGAAGTTACCGCCGTCGATCTGGACGTGCGACCGAGCGTAATTCAAAGCTGTGTTGGTATGTCGCCGCAACAGCATCAACAGCAGCAATCGCCATCATCCTTGCCTGCTACAATGAAGTCTACTGAAGAGAAGCAACCGTCGATCTCGCCGTATCCACTTCCAGTTACGCCCAACTCCATTCCTAAATTGATATCCGTCACTGTGACACCCGATATAGGACATATGTTACCGTCGCCGCATGAGCATCAAAATCATCCGCCGCGAATACCAACGATTAAACAATTACCAGTTCATcacaacaataacaatattagCATGatgaataacaataatatgataaacaGTCGAATAATAAATCTTGGTAACTCGAACAATACCGCGCTATTGCAACTGTATGCGAATGCGAACGTCGTACCATCAACTATTTCGTCTGTGCAACAATCAAGCCACCGTTTCGTTCCACCAAATATTCCAAATGGCAGGTTATTACTACCAAAGGTGACAcaatcaaggtcgatatttGTGCACAATGAAAGGACGGTTTATGGAAATCCCAAGGATATTTTGAACTCTCCTCCAAAATATCACTCGCCGCATCCGCAtcaacaacagcagcaacagcgcTCGCAGCAACATCCACAAATGAGCTCCAGCAACGACATCGGACAAGGTGTTCTCGATCTGACGCAAAAGAACGAGAAACCGACGTTCCCTAGGCCCAGTCTAGAAATAGTCAGAGTACCTGTAGTGCAGAGGCCTAATCCATTAAATCTGGACGTGCGGAATTCACCCGTGGCTAAGGATAAATTGTCGGACAGACCTGTCGTCGATTGTCCAAAGCGAATACCCTTCCCTGCCTACCAAAATGTAATTGACAGTCGAACTATCGCGTCGAATAACCTCGAGATTACGCTAGTGAATCCCAAGCACAAAAACAATCATCACGTCATACCGTCTCACGTTCAAATACCGAGTCCACCTAATAAAAATGCGATAGGAACGATAAATAGCGTGCAAATGAGGCAGCAGCAATCGCAGCAACAAGTGAACGGAAAGTATACGGTGAGAAATGAGCCGATTTCGCCATACACACCAAGGAAGCCAAGTCATCCCATCATACCAAACGTACCCAATTTGAATCATTTGAATCATAGTGGAAGTTCATTTCCTAGAATTCAGGCAACGACATTGCAACCACAACAACAAATGAGCATTGATAGGAGGAAAGCGGCTGCGGAGGCCGGTAGGGATCATCAACATCGTAGGATTAGCGAGGGCGAGAAATCATCTTTGGCAgcgcaacagcagcaacatcaacatcatcatcatcaccatcatcatcatcaggAATCCAGACAGAACGAGGCTGGGCGGCGACACAGTTTACCCAACATACCATCGGGATTCGTACCGACGGTACCGCAAAATAATTCTGCTCCCTTTCCTTTGCCACAATTGCCAAACGCGTCCGGCAAGTTCCTACCAATTCTGGACCCTATGTACTACTCCACGTTCTATAACGGTTTGTTCCCACCGCCGATTCCGCCCACGGCCACCGCAGCTGCTGCCACCGCGTCGTCGTTTTTACCGCCGGAATTTAACGCATATTACAAGGAATTACTTGCTTCCTCGCAACCAAGACTGACGGGGATGACGGGGCAGCCGCCGCATCAACAGCCGGCCGCTCCAACGTCTAAA
Protein Sequence
MPQPQVLTDPGIDFSDVEKQQKEYESNLNSLKRPDSFQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTKVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAITSLVIPTVGRPPSSGIRRSERKTSAEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEETKVRLNLGRRTKSMSASEDLDIKEESSEFYMSETPPPIDVIPATTTPPLQPIMSATTTTLLLSEKPKAETGKTSSLRSVRVKPERLKSLNTIIANNATPSSQQASQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPPGLPVTSVAANASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGGEKFAEKTIMPPVSRSPEVIDLENENDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDVRPSVIQSCVGMSPQQHQQQQSPSSLPATMKSTEEKQPSISPYPLPVTPNSIPKLISVTVTPDIGHMLPSPHEHQNHPPRIPTIKQLPVHHNNNNISMMNNNNMINSRIINLGNSNNTALLQLYANANVVPSTISSVQQSSHRFVPPNIPNGRLLLPKVTQSRSIFVHNERTVYGNPKDILNSPPKYHSPHPHQQQQQQRSQQHPQMSSSNDIGQGVLDLTQKNEKPTFPRPSLEIVRVPVVQRPNPLNLDVRNSPVAKDKLSDRPVVDCPKRIPFPAYQNVIDSRTIASNNLEITLVNPKHKNNHHVIPSHVQIPSPPNKNAIGTINSVQMRQQQSQQQVNGKYTVRNEPISPYTPRKPSHPIIPNVPNLNHLNHSGSSFPRIQATTLQPQQQMSIDRRKAAAEAGRDHQHRRISEGEKSSLAAQQQQHQHHHHHHHHHQESRQNEAGRRHSLPNIPSGFVPTVPQNNSAPFPLPQLPNASGKFLPILDPMYYSTFYNGLFPPPIPPTATAAAATASSFLPPEFNAYYKELLASSQPRLTGMTGQPPHQQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01254583;
90% Identity
iTF_00417350;
80% Identity
-