Basic Information

Insect: Acromyrmex echinatior
Gene Symbol: -
Assembly: GCA_000204515.1
Location: NW:205775-218667[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00027 0.15 11.4 1.5 3 43 11 56 9 57 0.95

2 12 0.00013 0.071 12.4 0.1 2 23 73 92 72 110 0.85

3 12 0.0034 1.9 7.8 0.8 11 39 134 162 128 169 0.84

4 12 0.0018 0.99 8.8 0.8 3 29 231 257 229 277 0.79

5 12 2.8e-06 0.0016 17.7 0.1 2 44 294 333 293 333 0.94

6 12 0.025 14 5.1 3.2 5 39 351 384 349 391 0.90

7 12 0.0058 3.3 7.1 0.6 3 28 456 481 454 502 0.80

8 12 6.6e-06 0.0037 16.5 1.1 2 43 518 556 517 558 0.91

9 12 0.00011 0.063 12.6 2.9 5 42 575 611 573 613 0.92

10 12 0.00015 0.083 12.2 2.0 3 43 675 721 673 722 0.94

11 12 0.00023 0.13 11.6 0.9 2 25 738 759 737 775 0.84

12 12 0.068 38 3.7 0.1 10 24 798 812 795 825 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00027	0.15	11.4	1.5	3	43	11	56	9	57	0.95
2	12	0.00013	0.071	12.4	0.1	2	23	73	92	72	110	0.85
3	12	0.0034	1.9	7.8	0.8	11	39	134	162	128	169	0.84
4	12	0.0018	0.99	8.8	0.8	3	29	231	257	229	277	0.79
5	12	2.8e-06	0.0016	17.7	0.1	2	44	294	333	293	333	0.94
6	12	0.025	14	5.1	3.2	5	39	351	384	349	391	0.90
7	12	0.0058	3.3	7.1	0.6	3	28	456	481	454	502	0.80
8	12	6.6e-06	0.0037	16.5	1.1	2	43	518	556	517	558	0.91
9	12	0.00011	0.063	12.6	2.9	5	42	575	611	573	613	0.92
10	12	0.00015	0.083	12.2	2.0	3	43	675	721	673	722	0.94
11	12	0.00023	0.13	11.6	0.9	2	25	738	759	737	775	0.84
12	12	0.068	38	3.7	0.1	10	24	798	812	795	825	0.77

Sequence Information

Coding Sequence: ATGGCACTTCAAAAAAAATCAGACAATTGGATTTGGAAACatgttcttaaattaaatgattctaTTATACAATGCAATGTAGATGattgtaagaaaatttatacaatgacTAACAAAGGTGAATATAGAGTGATAATGACGATGAAAGGACATTTATACCATGAACATGGAAAATACGATGAACAAGATCGGTTAAAATGGTTAAACGACAATGACTTGATATGGCGATATTTCGATAAAGCAAACTTATACGTAGCAAATTGTAAGCTTTGTGGCGGTTTGTTTCGTCAGTCATATGTACCACTTATAAAGACGCATCTGCAAAGTCATCGTCAAGAAATAAGAGATGgtgtagaaaaagaaattgcgGATAAGTCTCTATCGCAAAATTACGTAATCGATATGGACGAATTTATTGCACGATGCAAACGTTGCAATGATaaaatggacatattttacGGAACAGATGCCTTAATACATCAcgtttgtttaaaaaagaataaatgtttatgGTCTGAAGATAATAATGTGAACAGAATGATACAACAGTCTACAGCTACTGAAAATGCAAATACAAGCTCCCATCATGATGATATAAATAGTCAGCCTGGAAATCGAGAAAATCAACAAAGTGACACATCGCGACACTGTGTGGATGTAATGGCAGCTCGAGAAAGATCAAACAATTGGGTGTGGaaacatttacttaaattaGACGATTTTACTGTACAATGCAATAtagataattgtaataaaacttataatacGACTTTGGATAGAAGTAAAGGTAGaatgatagtaataataaaaggacATTTATACCATGAACATGGAAAATACGATGAAGAAGATCGATTAAAATGGGAAAATGACAATGATTTAATATGGCGATATTTCGACAAAGAAGGtttatacaaagaaaaatgtaaattttgttatgaTTCACTTTCCATATCATATACACCATCGTTAAGGGATCATCTGCGACAATAccatcgtaaaaaaataagagctgGTGTACGAAAAGAAATTGCGGATAAGTCTCTATCGCAATATTTCGAAATTCATAAGAAAGAATTTAATGCATCATGCAAACGTTGCAATCATaaaatggacatattttacGGAATAGATGCCTTAACACATcacatttgtttaaaaaagaatcaacGTTTaagatttggaaaaaaatctgaagataataatatgaacAGAATGACACAACAATCTACAGTCACTGAAAATGCAAATACAAGCTCCCATCATGATGATATAAATAGTCAACCTGAAAATCGAGAAAATCAACAGAGTGACACATTGGGACACTATGTGGATGAAATGTCAGCTCGAGAAACAAATAATTGGGTGTGGAAACATTTACTTAAAGTAAACGATTCTTCTGTACAGTGCAATATAGATAATTGTGATAAAACTTATACGActtttgatagaaataaaggtagattgatgatgatgataaaaGGACATTTATACCATGAGCATGAAAAATACGATGAAGAAGATCGGTTAAAATGGGAAAACGACAATGACTTAATATGGCGATATTTCGACAAAGTAGGtttatacaaagaaaaatgtaaattttgtaagGATACACTTTTGGTATCATATACACCATCATTAAGGCATCATCTGTTAAAGTATCATCATCAAAAAATAAGAGCTGGTGTACTAAAAGAAATTGCGGATAAGTCTCTATCGCAATATTTCGAAATTCATGAGAAAGAATTTAGTGCACGGTGCAAATGTTGTAATGTTGAAAAGAACATATTTTTCGGAACAGATGCCTTAATACATCACAtgcaaaaaaatcgatgtgtaGGGTATCATAACGAAGATGATAACGTGAACAGAATGACACAACAATCTATAACCGATGAAAATACAAGTTCCCatcatgataatttaaataaacaagttCTTGGAAATCGAGAAGATCGACAAAGTGACACATCGCGATGTACGGATATAATGGCAGCTCTAAAAGGATCAAACAGTTGGGTGTGGAATCATGTTCTTAAATTAGACAATTTTACTGTACAGTGCAATATAGATGGTTgtgatcaaatttatataaatcgaaatagaaagtttataaatagaatgatAACAACGATAAAGGAACATTTATACCATAAGcatgaaatatgtaatgaaGAAGATCGCTCAAAATGGGTAAATAACAATGACTTGATATGGAGATACTTTGACAAAGTAGActtatacaaagaaaaatgtaaattttgtaatatttcactTCATCAAGCACATAtaccatttataaaaaagcatCTGCAAAAACATCGTcaagaaataataactattgtaCGAAAAGAAATTGCGAATAAGTCTCTATCGCAAGATTTTGAAAtagatgaaaaagaatttagcgcattgtgtaaatattgtaatgttaaaaagaacatattttaCGGAACAGATGTCTTAAAAcacatttgtttaaaaaaaaaacaacgttTAATGTCTCGACAAGAACCTGAAGATAATGATGTCAACAGAATGACACAACCAAGGATACAACAGTCTATAGCCActgaaaatgtaattacaaattCCCATCATGATGATATAAATAGGCAAACTCCTCGAAATCAAGAAAGataTGTAAAAGAAGCTGCAGATGAAAATGCAATTACAAGCTCCCATCATGATGATATAAATAGGCAAGCTCCTCGAAATCAAGACCAACAAAGgAATGAAGAAGGAGCTGCAGATGAAAATGCAATTACAAACTTCCATCATGATGATATAAATAGACAAGCTCTTCGAAATCAAGACCAACAAAATTCTGAAGGAATTAACATAGATGACACAGTACAATTCCTTGATTACAATCAAGAAAGTACATATTGCTACATTCTTGGAAATCAAGATGGTCCACAAAGTTCTGAAGAAAATAACACGGATAACATAGTATTCCTTGCCCATGATGTTTCGAATGCAAGTTCTCATTATGACGGTACAAACTGGCAAGATCTTGgatatcaaataaatcaaCAGAGaatgatGCATCAATCCGTAGCAGCAGTAAATATGGCTACAAGTTATCATGATGAAAGTACATTTTGttctgaagaaaataatacgaGTAACATAGTATTCCTTGCTCATGATGTTTCGGATGTAAGTTCTCATAATGATGGTACAAACTGGCAAGGTCTTGGATATCAAATAGATCAACAGAGTTCTGAAGGAAATAACACGAATAGCATAGTATTCCTTGCTCATGATGTTTCGGATGTAAGTTCTCATAATGATGGCACAAACTGGCAAGGTCTTAGATATCAAATAGATCAACAGAGGTACGTAAATCAACAAAGttCTGAAGAAAATAACACGAATAACATAGTATTCCTTGCTCATGATGTTTCGGATGTAAGTTCTCATAATGATGGCACAAACTGGCAAGGTCTTAGATATCAAATAGATCAACAGAGtaCTGAAGAAAATAACACGAGTAACATAGTATTCCTTGCTCATGATGTTTCGGATGTGAGTTCTCATAATGATGGTACAAATTGGCAAGGTTTTGGATATCAAATAGATCAACAGAGTTCTGAAGGAAATAACACGAATAGCATAGTATTCCTTGCTCATGATGTTTCGGATGTAAGTTCTCCTTATGACGGTACAAACTGGCAAATTCTTGGATGTCAAGAAGATCAACAGAgAATGATGCATCAATTCGTGGCAGCAGGAAATGTGGCtacaaattttcataatgaCGATACAAATTGGCAAGCTGTTGGATATCTAGTAGATGAGCAGAGATTTCAAGAAGGAACTAATGTTAGTAACGTGCATAGAATGATGCATCAATTCGTGGCAGCAGAAAATGTGACTACAAGTTCTCATAATGATACAACTTTGCAAGCTCCTGGAAATCAAGAAAATCAGTAA
Protein Sequence: MALQKKSDNWIWKHVLKLNDSIIQCNVDDCKKIYTMTNKGEYRVIMTMKGHLYHEHGKYDEQDRLKWLNDNDLIWRYFDKANLYVANCKLCGGLFRQSYVPLIKTHLQSHRQEIRDGVEKEIADKSLSQNYVIDMDEFIARCKRCNDKMDIFYGTDALIHHVCLKKNKCLWSEDNNVNRMIQQSTATENANTSSHHDDINSQPGNRENQQSDTSRHCVDVMAARERSNNWVWKHLLKLDDFTVQCNIDNCNKTYNTTLDRSKGRMIVIIKGHLYHEHGKYDEEDRLKWENDNDLIWRYFDKEGLYKEKCKFCYDSLSISYTPSLRDHLRQYHRKKIRAGVRKEIADKSLSQYFEIHKKEFNASCKRCNHKMDIFYGIDALTHHICLKKNQRLRFGKKSEDNNMNRMTQQSTVTENANTSSHHDDINSQPENRENQQSDTLGHYVDEMSARETNNWVWKHLLKVNDSSVQCNIDNCDKTYTTFDRNKGRLMMMIKGHLYHEHEKYDEEDRLKWENDNDLIWRYFDKVGLYKEKCKFCKDTLLVSYTPSLRHHLLKYHHQKIRAGVLKEIADKSLSQYFEIHEKEFSARCKCCNVEKNIFFGTDALIHHMQKNRCVGYHNEDDNVNRMTQQSITDENTSSHHDNLNKQVLGNREDRQSDTSRCTDIMAALKGSNSWVWNHVLKLDNFTVQCNIDGCDQIYINRNRKFINRMITTIKEHLYHKHEICNEEDRSKWVNNNDLIWRYFDKVDLYKEKCKFCNISLHQAHIPFIKKHLQKHRQEIITIVRKEIANKSLSQDFEIDEKEFSALCKYCNVKKNIFYGTDVLKHICLKKKQRLMSRQEPEDNDVNRMTQPRIQQSIATENVITNSHHDDINRQTPRNQERYVKEAADENAITSSHHDDINRQAPRNQDQQRNEEGAADENAITNFHHDDINRQALRNQDQQNSEGINIDDTVQFLDYNQESTYCYILGNQDGPQSSEENNTDNIVFLAHDVSNASSHYDGTNWQDLGYQINQQRMMHQSVAAVNMATSYHDESTFCSEENNTSNIVFLAHDVSDVSSHNDGTNWQGLGYQIDQQSSEGNNTNSIVFLAHDVSDVSSHNDGTNWQGLRYQIDQQRYVNQQSSEENNTNNIVFLAHDVSDVSSHNDGTNWQGLRYQIDQQSTEENNTSNIVFLAHDVSDVSSHNDGTNWQGFGYQIDQQSSEGNNTNSIVFLAHDVSDVSSPYDGTNWQILGCQEDQQRMMHQFVAAGNVATNFHNDDTNWQAVGYLVDEQRFQEGTNVSNVHRMMHQFVAAENVTTSSHNDTTLQAPGNQENQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00182109;
90% Identity: -
80% Identity: -