Aech010570.1
Basic Information
- Insect
- Acromyrmex echinatior
- Gene Symbol
- JARID2
- Assembly
- GCA_000204515.1
- Location
- NW:76524-85807[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4 5.2e+03 -2.8 0.2 57 82 151 178 133 180 0.58 2 3 1.6 2.5e+03 -1.8 0.0 38 65 1104 1130 1097 1141 0.81 3 3 5e-23 7.6e-20 70.4 0.0 6 89 1367 1448 1363 1448 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGCAAcgataaaagaaagaggaaggaGGGAGATCTGGTGGACCTCGTGGAACCACTTTCGGAATCTCCGAAAAGGACCAAAGTTCATGCACAAAGAAAATTTGCGCAAGGTGCGATCACTGTGTTTAACACATCACCTACACCTATTAAGGACAAAGAGAAAGCTAAACCTGCTACAATCACAGAATTAATAACTCACAAACGACCAAATACGGAggattttttaacatttttatgctTCAGAGgAACATCTATTTTGCCacctaatttaaattttttcaatactggcaacaaaaaagagaaacaagGATCTAAGCCAACTCAAACTTTTATAGAGAAGACATTGTCCTCTACTAGTACTTTCATAGAAATTCAAAAGCATGAAAATACAtgccaaaaaaatttgacaaaagtAAAGCCTATTgtctcgaataaaaaaaaagtgactaGTGCGTTGCACAAAAGTATTACCAAACTTAAGACGACTACATCTACGGTTCAAGcacttaaaaagaaatatcaggAACAACGCCTTGCTAAGCAaagaatcaaaaataaatttaaagctaCTTGCGTTATGAAGACAAGATCATGTACAGAGAGATCTATGTTGAAGGCTGGTCTTAAGTTGGCACCGCGAAAATTTTTACCTAAAATCAAGACAAAGAGGCATGGCCTAAGAAGTAGTGTACTACCAGAGAAAACCAATAAACCTCTATCAAAAGCAAAAGTTACGTTACCCAAACCAAAGAAGAAAGTcaatttaaaatcgaaaaatagtGATACTTCGAATATAGATGCGTCATCTGAAGAAGACAATGATGTCGATGACAATCAAGGGGAAGAATTACACATGGAGAAATCAACATCGCAGATAAAGCGAAACATACAAAGAGGCATCCAAAAAAAGATTTGCACTAGAAGTAAGTCAGAGATGAGGAGAGTTACAAGATCGTCCAGTGGCATAGTCTCTTCACAAAATCTTTCCAGAAGGCCTACCAGAAAAACAAAGGAAGCAGCTGCTGTATACATGGAAATTCTTGGGAGAAAACTAGTGAGTCCGGATTTAGAAAATGATGATAACGTTTCATTTGAAAGTTTTCCCGAGCTACCAAATGCTCGTAGAATAACGCAAACGGAGAACGAGCTTAAAGCCAAAGTGAAACAAAATAGTATCAAGACTATTATTAAAACCAAGGATTCTAAAGTTAGTTCTTACAATAGTAACGCTAATAAGCGATTggataaaagcaaaaataataaactgatTTTAAAGAGCAAACGTCTGATGAGGGTACAGAAATATTGTGAAGAGGATAGCGACGAAGAATCTGAGAGCTCAATAGAAACAAGCAATTCGAGACCTATTACCAGACAGAGTCTTGGAAAGATTGATAAACCAAGCAGAAGCCTTAGATCATCCTCTAAAAACACAACTATACAAACAACTATACAAAGTAACGTAAATAGCAAACCGAAGActcaaattcaaaattgtgtGAAATCAGCTAGGGaaaaatttgtgataaaaCGTAAAcgcgagaaaaatatatgtaaaacgtCATTGGATAAGATTAAGCAAAAGAGCCTTAAAAGTAATCAAAACGAGAAGGGGGAATCAGAAGAGGAGACGCTAGGAATGCTgctcaataaaataaagaagaaaaaagacaatgaggaggaagaagaagggCAAGTCCCTGACAATATCAACAAtctgaaagataaaaaagcagCTTGCAGTGATATACAAAAAACAGCCGATCTGTCAAAAGTATCAGACGATGAGGAATCTTTTCGAGGGTTTACTAAGAAGGCGATATCAAAAGTTTTGAATTCATGTCAGACGCATGCCAATGTTAATTTGCTAGTCACAGAAtccgataaaaaattgaatttaccCAGAACATTGGATGTATCGCAAACAGCGCAAATAGTCAATCAAAGCGCCATTTTACGgaaaaataaagtagaaaCATCACCGATCAAAGATGGTTTCTCAGTTGCAAATCCGCTGAACAGTGAATGCGATTTATCTGTACAAGAAAAATCTGTATTAGATTTGTCCGTCAAGAGCCAAAGCTTATTGTTACCATCTGTAGAACAGACGAGCAAAACATGTAATCGCGAAAATGAGGTTTCTTCCTCAAACCTTATGCCACTGTCCACTCTGCACACAAGAAAAGAACGAGTGAATATGTCGACCGAACAGATAGAAAAGTGGTTGAACGAAAGTTCGTTTGCTAAAGAAGAGAGCAAGCTGGAGATGGAAAATGTTTCCAGTTTTAGATATGATTCTACAGAAAAGTTAAAGGCGGATGTCTCGCATTTGTCTATTTCGACGAAAATCCAACATTTGGTACGCCCAGTCAACGTTACACTTTCGAAATTATCGGATAAGACGAATTTGAAGGATCGTATGGGGATACACAGCAAAAATGTAATACCGGTAACATCTGATACCGGTAATATCCGTAATACTGGAGTGAAGCAACAAAGTGCGAcaaatattgacaaaaataagAGCACTATCGAAACGAAAGAGATCGTCAAGAATAAAATTGGGAAAACGAACAAAGATACTTCTTTTGCTGAAGATATTAGCGATACTGTGTCTAAAACGGATCAAAACTCCGTGGTGGATGATGCTGTAGAGAAGAAATCGCCGAcagagaagaaaatatttcaaccgCGGAAACCTTTTTTGCCCAAGGTTAAGGAACGTAAAATTGTAATACCAAATGCAAACGCGTTTTCGCCAGAGAACGAGAGTAGCGTTTACGCATTTGAAAGTGACGCCGAAGTTCCCGTTAGCACACCCTTCCGAAGAAAGATCAGAGATAATGGAAAACATTCGACTGCGATAACACCATCACCTGCAGAGACTATAATATCTGAGTCCAAAGTAATCGCtaacaaatcaaatttgaagGATTCTAAACCATTGGATAGTACGGAAAAATTGTCGAACGATCCCGTAACGACTGTAAAGAAAGAACAAGAATCGCAAGAACCGAAGAACGTAGCAAATTCAGGTACAGGCGTGAGCAAGTTTGAATTGCCCAACAATTTTGCAAACTTGACCACTGTCCAAGTGTTACCACTCGACAAACTCACGACAAGTTGGAGTAACGTAAATTGCAGTGCTTCCATAGCGGTGCAGGTGAATCTCGACGAGACCACTCAGGAACACGAAAACAATACAAGTCAACAGAAAAGTACTGAGATATCTACTCAAACCGAAATGAGTAACGAGAatgacgacgacaacgatggacatctattttatattccgTTACAGGCTGTTACGAGAGGTGGCCCAAATCTGGTACAAGGTCAACAGCTAATACAGGGCGTGGCTGTTAAACTCGGTACGGAAGGACCGACCGGCCCTAATCAAAGAGTTCTCCTTCGAGCTAAGTTGGTCACTAAGCCACCGTCATCAGTGGCACGTTGTCCACCGATAGGAACAGTACAACCGACAACGCGTACTCCACCTAATCCTGCAGCAATGACAGTGGAACAGCAAATACCGTCAACGTCAACGACTGCAACTGTGTCAACCACGATAGCAAGTATGTCGAACGTGGAGATGCAATCAATGTCATTGGTGAAAAACGAAATGCCAGTGCCAAGTCTGATTCGTCAAAATGCTAGTACAATCATAAATAGCAATTCAGCTGAGAAACTCACAAAATCACCTAAGTCTAGGGAGCGGAAAGAGCTTATCGAAATTATACACTTTTATCACttgtgataaaaatcttttaggaCACAAATGAAATGCAAACAAAAGGGATCAGAACTGTGCTCTTCAAGCAGTACGACGTTTCTAGGCGCGAAAATCGCGAATGATGAAGCTCGCGTGGTCGAGGCGCCAACGTTTTATCCGACGGAGAAAGATTTTCAGGATCCATTGGAATACATAGATAAGATAAGATCAATCGCTGAAAAATTTGGAATATGTAGAGTGGTGCCTCCACCAAATTTCAAGccaGAATGCAAGGTGTCTGATGATATGAGATTCACCGCTTATAATCAATACGTACATCGCATGCTACACAGATGGGGTCctaatgtaaaagaaatgatggctattaaaaaatatttagctaCTCAGAGTATTACTTTGACTCAACCACCATGgATTGGTGGAATGGAAGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTAGGTGGATTGAAAGAagtaattgagaaaaaaaagtggCAAAAAGTAGCAGATGGTATGAAAATACCGAAATCAGCACAGGATCGTGTTACTAAGCTAGatgatatttattgtaaatatttattgccaTATGATACATTATCCCcagaGGAACGTGGAAAGTTGTTTGACGAAGTTGAAACTGAATGGGTAAGAAAAGAAAGCAAAGCCTTGCAAAGGCAAGAAGTGACATTTAATGATAACGATGAGGAAGAGGATGAAGACAGTTCTGATGAAATTGAAGAATGTATCGTAAAAGGAAGAAACATGCCATTGAATGCTTTTTATCGAATTGCCCGTAATACTCAACGTATGTGGTTCGGTGAAAATCAACGAGGAAATGAAACCGAAGGTGCTTCCGCCAACGAGGTAGAGAGTGCATTTTGGAAACATGTTGCCGAGAGAAAACGTCATGTCTGCGTACATGCAGCAAGCATTGATTCGAGCGGTCGTGGATTTGGATTTTCTGTTGCAAAAAACAGTCCGTTTGCTAGACATCCTTGGAATCTTAAAGTTCTCACTAACAATCCTGGATCAGTATTAAGAGCTTTGGGTCCACTAATGGGTGTAACCGTACCAACGTTGCATGTGGGTATGTTATTTAGTGCTTGTTGTTGGTATCGTGATCCGCATGGTCTACCATGGATAGAGTATTTACATACAGGTGCCAAAAAAATTTGGTATGGAATACCTGATgagcataataataatttccgaAAAGCGCTCTCGAAAATGGTACcacaatattgcaaaaataagacTATATGGTTACCTTCTGATACTGCTATGGTTCCGCCGGAATTATTAGTGAGCAACGATGTACCATTATGTCAGACTGTGCAAGAGCCGGgacaatttataatagtatttccAAAAGCATTCACATCAAGCATATGTACTGGTTATGTTGTATCTGAAAGCGTATATTTCGCACAACCATCCTGGTTAGAAACTGCAGAACAAGTATTTAAggatATACAAGATAGTTGCGAACCTTCTATCTTTTCATTTGAgagattgttatttaatattattaatgatacgaGATCACACATAGACATATTGAAACAGatATTGCCGAGTGTAATAAAGATttgtgaaaaagaattaaattatcgtaAACAGCTGGAAAGTGTAGGTCTTATCAATAGAGAAAGATTGCCTTTACCAGTTAGTGGAAAAGGGAAGAAAGGGAAAAAGGTGAAAGATGATGATGGCGACTTCGAATGTGAGACATGTAGAGCTAATTTGTTTGTctctttgataaataattcgcAAGATGACAGCGTTTATTGTTTGCCGCATGCCTTGCACTTAATTAGTTGTAAGAAGCAGGTTTTGAAACATTGTACTCTCATGTACACGTATGATGAAgATGAATTAGACGAGTTGATTCACAAACTGGAAAACAGAATTGAAGCCAAATCTAAAAAaactaatcaaataaaacaaaataagcaagaaaaataa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLVEPLSESPKRTKVHAQRKFAQGAITVFNTSPTPIKDKEKAKPATITELITHKRPNTEDFLTFLCFRGTSILPPNLNFFNTGNKKEKQGSKPTQTFIEKTLSSTSTFIEIQKHENTCQKNLTKVKPIVSNKKKVTSALHKSITKLKTTTSTVQALKKKYQEQRLAKQRIKNKFKATCVMKTRSCTERSMLKAGLKLAPRKFLPKIKTKRHGLRSSVLPEKTNKPLSKAKVTLPKPKKKVNLKSKNSDTSNIDASSEEDNDVDDNQGEELHMEKSTSQIKRNIQRGIQKKICTRSKSEMRRVTRSSSGIVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSFESFPELPNARRITQTENELKAKVKQNSIKTIIKTKDSKVSSYNSNANKRLDKSKNNKLILKSKRLMRVQKYCEEDSDEESESSIETSNSRPITRQSLGKIDKPSRSLRSSSKNTTIQTTIQSNVNSKPKTQIQNCVKSAREKFVIKRKREKNICKTSLDKIKQKSLKSNQNEKGESEEETLGMLLNKIKKKKDNEEEEEGQVPDNINNLKDKKAACSDIQKTADLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESDKKLNLPRTLDVSQTAQIVNQSAILRKNKVETSPIKDGFSVANPLNSECDLSVQEKSVLDLSVKSQSLLLPSVEQTSKTCNRENEVSSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSFAKEESKLEMENVSSFRYDSTEKLKADVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRMGIHSKNVIPVTSDTGNIRNTGVKQQSATNIDKNKSTIETKEIVKNKIGKTNKDTSFAEDISDTVSKTDQNSVVDDAVEKKSPTEKKIFQPRKPFLPKVKERKIVIPNANAFSPENESSVYAFESDAEVPVSTPFRRKIRDNGKHSTAITPSPAETIISESKVIANKSNLKDSKPLDSTEKLSNDPVTTVKKEQESQEPKNVANSGTGVSKFELPNNFANLTTVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEHENNTSQQKSTEISTQTEMSNENDDDNDGHLFYIPLQAVTRGGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPSSVARCPPIGTVQPTTRTPPNPAAMTVEQQIPSTSTTATVSTTIASMSNVEMQSMSLVKNEMPVPSLIRQNASTIINSNSAEKLTKSPKSRERKELIEIIHFYHL**KSFRTQMKCKQKGSELCSSSSTTFLGAKIANDEARVVEAPTFYPTEKDFQDPLEYIDKIRSIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVETEWVRKESKALQRQEVTFNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNETEGASANEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNPGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFRKALSKMVPQYCKNKTIWLPSDTAMVPPELLVSNDVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPSVIKICEKELNYRKQLESVGLINRERLPLPVSGKGKKGKKVKDDDGDFECETCRANLFVSLINNSQDDSVYCLPHALHLISCKKQVLKHCTLMYTYDEDELDELIHKLENRIEAKSKKTNQIKQNKQEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423428;
- 90% Identity
- iTF_00015841;
- 80% Identity
- -