Acha003877.1
Basic Information
- Insect
- Acromyrmex charruanus
- Gene Symbol
- grn
- Assembly
- GCA_017607545.1
- Location
- JAANIC010003256.1:1781079-1797285[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-18 1.7e-15 55.3 5.8 1 35 30 63 30 64 0.97
Sequence Information
- Coding Sequence
- AAACGCCAACGTGACGGGTGTGATATTTGTGTCTTCTCTTTTCCAAAACTGTCGCTCCAGAGTGCGGCGAGACGGGCGGGCACCAGCTGCGCCAACTGCAAGACGGCGACCACGACTCTCTGGCGGAGGAATCAGTCCGGTGAGCCAGTCTGCAACGCTTGTGGGCTCTACTACAAGTTGCACAATGTGAACCGGCCGCTGACGATGAAGAAGGAAGGTATCCAAACGAGAAACAGGAAGCTCTCGTCGAAAAGCAAGAAGAAAAAGGCTGGCGGTTGCCTAGGTCTCGGTGGTGTCATGGGCGACATGATCAAGGCCAGTGGACACCTTGATCTCGATAACAAGCCCTTCCACTCGGGATTCGGATCGCCAATGGGTACGTCGCAGCATCATCACACGATGCATCCGGCGATGCAGCATTACATGTATCACACGGGTGTCGGCGTGGCCGGAGGTCTTCATCAGGGATTTGCGCCACCGGCGCCGCCCCCCATCCACCCGCACTCACATTCGCATTCCCATTCTCATCACATGACGAGTCTTCAGGGTCTGCAGCTGGCGGCCACGACGAACATGGTGAGTGCACGATTGTTACCTTCATCGGCGATTGACCAAAGGCTTCGACCGCCGATAATCGATCAGGATCTACCGCGTAGAGTTTGTCGATTTCTCTCGGGTCGTGAACCGAGTTTAACATGCTGCAACTATCTCGCGATAGCGAAACGATACGTCCGCGTCATT
- Protein Sequence
- KRQRDGCDICVFSFPKLSLQSAARRAGTSCANCKTATTTLWRRNQSGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMGTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNMVSARLLPSSAIDQRLRPPIIDQDLPRRVCRFLSGREPSLTCCNYLAIAKRYVRVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00016383;
- 90% Identity
- iTF_00084964; iTF_00222213; iTF_00233586; iTF_00085843; iTF_01228691; iTF_00087605; iTF_00142165; iTF_00219479; iTF_01090360; iTF_00016383;
- 80% Identity
- iTF_00016383;