Acha008180.1
Basic Information
- Insect
- Acromyrmex charruanus
- Gene Symbol
- pnr
- Assembly
- GCA_017607545.1
- Location
- JAANIC010006140.1:3406807-3416443[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-18 9.6e-15 52.9 3.2 1 34 165 197 165 199 0.97 2 2 1.3e-18 1.5e-15 55.6 6.2 1 35 219 252 219 253 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGTGGCGGGTACGGCGCAAGTTCCGATTACCAGCAGCAGTcccagcagcaacagcagcaacacgGGCAGCAGCTCCAGGCGCCTGTCTACGTTCCATCGTCTAGACCAGCGATTCCATCTGCAGCCACGGCGGCGCAATATCATTCCTTCCCTACTTCACCCTCGCCCGCATGGGAAAAGACGGCATCCTGGCAGCATGGGGTGGAGACGTATGCGGCGCATCACGCGCTCGCCGGACACGCGAGCGGTACCGCGGCGGCGGCGATGGGACCGCATCCTGGACCTGGTCATCCGCATGCGGGACATCCGCACGCGGCGCATCCTCACTCGACTCTCGCCGCAGCCGCGGCTGCACCGTTCTATGCGCAGAACGTCGCGATGATGTCCTCGTGGCGCGCTTACGACGGCACCGGTTTTCAACGTGCATCGCCTTATGATGCCACAATGGATTTCCAATTTGGCGAGGGTCGCGAATGCGTAAATTGCGGCGCGATATCGACGCCGCTCTGGCGGAGAGATGGCACCGGTCATTATCTTTGCAATGCATGCGGACTTTATCATAAGATGAACGGCATGAATAGACCGCTCATCAAGCCCTCAAAACGCCTGACCGCAACGAGGCGACTCGGGCTGTGCTGCACAAACTGCGGCACTCGCACCACCACCTTGTGGAGGCGTAACAATGAGGGTGAGCCAGTGTGCAACGCTTGTGGATTATACTTCAAATTACACGGAGTCAATAGGCCGCTAGCCATGCGAAAGGATGGTATACAGACAAGGAAAAGAAAACCGAAGAAGACTCCAGAACAGAATGCTAGATCATCTCAGGGGGATCATGAAACCACTGCCTCGACTACATCCTCTCCTTCTACAGaCTTGAAGAACAAtcaacaacagcagcagcagcaacaacaacatCAGATCGAGGTGCCAAAGTCATCGGGCTCATCAACGTCGACTGATAGACCTGTTTACCTCGGACATACCTCTCTCTTGGCGACTGGAAATGTACCTGCTGTGAAAACGGAACCGCGGAGTTGTGATGGCGTCGTTGGTCAACCGTACTCATCTTATTATCAACATCCTCATCAATTAACTGTCACTAGCGAACATCAGCAACAGAGTTATTATGGCACCCAGGAAGCACCCTATCATCATCAACATCATGTCACTACAGCAGCAAAAACTCTACCTACACCAGTGTCCTGTAAAGTGTGTGGTGATCGATCATACGGGAAACATTACGGTGTTTATTGCTGTGATGGTTGCTCGTGTTTCTTTAAGAGATCTGTGCGTCGCGGTGCTCTGTTCACTTGTACAAATAGTAATGGATCCTGCACCATTGACAAAGCTAGACGGAATTGGTGTCCACATTGCCGtctaaagaaatgtttctccATTGGCATGAATATAGCGGCGGTGCAGGAAGAAAGAGGGCCACGTGCTCGAAACAATTCGCTCTCAAATCCACATAATTCTAACAACACCTGGAAGCCTAGAGTTGATCCTTCAACATCTTTTTGTGCACGTTTTAATAATTCCGAGATATATTTGCCTTTCAAGAATCCCACACTGAATAATACTCTAATGATGAAGACGTTACACGAATCTGAAACTagagagaatattttctttcctgtCACGACGCGCTATGTACAGCCGACGAGGATTATATCACCCgGCACGGCTATACAGTACGAAATATCCGCGCAAATATTCCTGGCAGCTATTCGGAATGCACGTCGTCATCGAGATTTTTCGATACTGAATATAGAAGACCAAAACAAGATTCTTCGTCGTGGATGGTCTGCTCTTTTTGTTTTACGCGCAGCTACGTGGCCGGTTGATTTAATGAACATACGAGGACAAAGTGCAACGAATAACGATAGTGTTTTAGCCTGCATAATTGCAACGCGCGCTGCAATCGAAAAATTGCAACTTGACGATGTCGAATTGTGTGTTTTAGACACGTTTGCGTTGTGTCGTCCAgAAATCGCCAATAATACTACAAACGGTGTCCACATAATGTCACAAGCGAGAAATTACGCTGTGAAAACTCTAATACAACATCTCCAACAGCAAGACGATCGAGAGAATAAACTGGCGAAGATTCTATTTGTCCTACCTATTCTCACCGGATGTTGCTCTCGAGAATTGGCTGAGGAATTGTTTGCACCAATTATCGGCGACACAGATCTGGAAAGAGTTATCGCGTCTGTACGA
- Protein Sequence
- MFHGGGSGGYGASSDYQQQSQQQQQQHGQQLQAPVYVPSSRPAIPSAATAAQYHSFPTSPSPAWEKTASWQHGVETYAAHHALAGHASGTAAAAMGPHPGPGHPHAGHPHAAHPHSTLAAAAAAPFYAQNVAMMSSWRAYDGTGFQRASPYDATMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEQNARSSQGDHETTASTTSSPSTDLKNNQQQQQQQQQHQIEVPKSSGSSTSTDRPVYLGHTSLLATGNVPAVKTEPRSCDGVVGQPYSSYYQHPHQLTVTSEHQQQSYYGTQEAPYHHQHHVTTAAKTLPTPVSCKVCGDRSYGKHYGVYCCDGCSCFFKRSVRRGALFTCTNSNGSCTIDKARRNWCPHCRLKKCFSIGMNIAAVQEERGPRARNNSLSNPHNSNNTWKPRVDPSTSFCARFNNSEIYLPFKNPTLNNTLMMKTLHESETRENIFFPVTTRYVQPTRIISPGTAIQYEISAQIFLAAIRNARRHRDFSILNIEDQNKILRRGWSALFVLRAATWPVDLMNIRGQSATNNDSVLACIIATRAAIEKLQLDDVELCVLDTFALCRPEIANNTTNGVHIMSQARNYAVKTLIQHLQQQDDRENKLAKILFVLPILTGCCSRELAEELFAPIIGDTDLERVIASVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -