Acha001885.1
Basic Information
- Insect
- Acromyrmex charruanus
- Gene Symbol
- NCOR1
- Assembly
- GCA_017607545.1
- Location
- JAANIC010001623.1:1090193-1116675[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 2.1e+03 -2.0 0.1 31 39 509 518 506 519 0.80 2 2 1.3e-07 7.5e-05 21.8 0.0 3 43 681 721 680 724 0.96
Sequence Information
- Coding Sequence
- ATGGAGACAGTGGGCAAGCAAGTTCAGGTAGTGAGTGGACTGGGGGTGGGGGGTCCGGTGGGCCCTGTGGGCCCAGTGGGGGGAGATCTGCATCACCATCATCATCCACACCCGCACGCCCTTCCTCCGCACCCACACTCCCACCCCCACGGTCACCCCCATGGCTCCCACGGCCACTCGCTCGCGACGTCGAACCCCGGCAGAGGTCAGCCTCAACCACCGACCTCGCATAACCAGCACGTACCTGCGAGATCCACTCCTGTACAGCTGCATAGACCAACGCAAAATTATGTCAACATCAAGAGCAGTAGCCCGGTATCTCCGAGGACGATAGGAACGGGAGCGACGTACGTGCAGGGTGGTGCGGCCGCATCGTCCGCGGCAGCGGCGGCCGCAGCGGCCGCTGCGACTGCGGGTGGTCCTGTCGTCGCTGCCGGTGGAGTTACCGCGACGAGTAGCAGCGGTCTGGTTGGCGTTTCGAATGTTTTATCCTCTGCAAcgggtggcggcggcggcagcggcggcggcggcggcggtggtggcggcggcggcggcggcggtggcggcggcCAACCTACTGTCATCACCAGCCAaacgccgccgccgccactcATTGGAACTCCCTACGCCGCGAGAGACACATACCGTGCTGGCACTACGAATGTAAACGAGAGGCTTGCTATCAACGTGAGCAACAGTCCTCTGTCGCAAGTTGGTGGTGTCGGGGTAGTGCCCGCAGCAGAATATAGCAGCATGGGAGCTGGTAGAGGCGATCGGCAGAGGATATCCCTCTTGCCGCCTGTCGGCTCTTCGGTGACTTCTATACCATCACCttctgccgccgccgccgcatCGGATTATCAGCAACATACGACGGCAAGGAATCCGCCGCGAGTAGGCCTCATGCCCGTCCAGCCTGATCAGTATTGCAGTCGCACTCCCGTCGACATGTCCAGTCTGCAACAGGATGCGCCACCTTTCAAAAAGATCCGTCTAGGGCCACATCAGCAGATTCAGCAGCTGCAATCGCAGCCTCAGCCGCGTTGCCTGTCACCCGCGGACCCATGTGGAGGCAAGCAAGAACAACAGCAACATATTGTGCAGTTGCAACAACCACTTAGGATAGATACCAGGGAGCAGCCTGCCGTGGGAGCGTATACGCCACAGACGGAAGCTATTTCGCCTACGCTTCCAGAGCCGAGTACGCAAGAGGATGCACAATATAGGAGTACCAAGGATGATCTTCTGCAACAAATTGGCAAGGTTGACAGGGAGATTGCTAAGAGGgagaatcaattaaatatgttgCGAAAGAGGTTAAAAGACTTGGAAGAAACAGCGAATAAGCCTCTAGAAGTAAAAGACACTGAGGAACAGTCACAGCAACCAAAGCATCAATCGATGGCGCAAAAGGTCTACGCTGAGAATAGgagAAAGGCGGAAGAAGCTCATAGACTCTTAGAAAGACTGGGCCCCAAAGTAGAACTACCTTTATATAATCAACCGTCGGACACAAGTGTATACCAAGAAAATCGTACACGGCATCAGTGTATGCGTGTCAGACTTATAGCTAGGCTTCGGAGAGAACACGCTGAGCGCGCGTCTCTTCATCGGCAGCAGTCACAAACGTACGCAATTTTGGTTCAAGAATGGCATCGTAAGGTGGAACGGTTAGAGGCAACGCAGAAGAGGAAATCGAAGGAAACAAAGAATCGCGAGTTCTTCGAGAAGGTATTTCCCGAATTGCGAAAGCAGAGGGAAGATAAGGAGCGTTTTAACAGAGTTGGTGCTCGTATTAAGAGTGAAGCCGATCTTGAAGAAATAATGGATGGTCTACAAGAACAAGAgGAAGAAACATtgcaagatttaaaaaattccattaaaGCTTGTCAGATGGAGGATAAGAAGATGCGTTCGTATGCAGTCATACCGCCTCTATTATTGGATGCGAAGCAACGAAGGATCGCGTTTCAAAATCGGAATGGATTGCTTCAACCAGAAGAATTAGAAGCTCTTCACAGTGAACGTAAATTGATCAATGTATGGAGTTCGGTGGAgcacgaattatttaaagagaaatacCTTCAACATCCTAAGAACTATGGAGTGATAGCTCAATCGTTAGAACATAAGTCCGTTCCAGATTGTGTACATCACTACTACCTCACTaaaaaagcagaaaattataaacagcTTTTACGAAAATCGCGCCAACGGACACGTAGCTCTCGGAATAATCCGAATAATAAAGTAAATAATACCAGTTCGACTATTGGAcctatagatattttaacgaCAGGCGTAACGACAAGGTTACAGCGAGAGCAACAACAAAAGACTCAGGAGAATCCTCAGAATAGTTCGGCAACGACTACGTCTGCATCCACAACGAGCACTACGGGCACATCGAGCGTATCGTCAACAACTATCGGAACCACGACAgtaacgacgacgacgacgactcCTTCGAGCTCGATAGCGTCGGGCGTTAATGTAACAGCGGATTCAGTAACGACATCAACGACAACGACGATGACATCAGTCCCGAACATCACCGCGACGTCTAGCATCTCGACAACGTCGACAACGTCTAGCACGAAAGATTCCAGGGAGGCGAGTAAGGAGAATAAAGAGAACAAAGTCGATTTAAAAGAATCTCATCTCATAAAAGTAGAGCCGAAAGAAGAGTCGCAATCGGAGCCTACGTCGGGGAAGGACATTAAAGTAATAATGGAAGGGAAAGGCGCGCTATCATCGTCTGCGTCTTCGTTAAACAACGCGACGAATGTTTCGACCATCCAGTCAGACTTCAAGGAATCCAGTAAAAAGAAACCAGGTTGCAGAGACACGAATAATAGTGGTGCTAATGTGGCAGCTAGTGGTAGAATAAAAgataagaagaaagagaatcaTACTCCTATGGAAACCAGTGATGAAGAGGCACCATCGATCGACGTCATCGGTAAGTTTAGTGTCAat
- Protein Sequence
- METVGKQVQVVSGLGVGGPVGPVGPVGGDLHHHHHPHPHALPPHPHSHPHGHPHGSHGHSLATSNPGRGQPQPPTSHNQHVPARSTPVQLHRPTQNYVNIKSSSPVSPRTIGTGATYVQGGAAASSAAAAAAAAAATAGGPVVAAGGVTATSSSGLVGVSNVLSSATGGGGGSGGGGGGGGGGGGGGGGGQPTVITSQTPPPPLIGTPYAARDTYRAGTTNVNERLAINVSNSPLSQVGGVGVVPAAEYSSMGAGRGDRQRISLLPPVGSSVTSIPSPSAAAAASDYQQHTTARNPPRVGLMPVQPDQYCSRTPVDMSSLQQDAPPFKKIRLGPHQQIQQLQSQPQPRCLSPADPCGGKQEQQQHIVQLQQPLRIDTREQPAVGAYTPQTEAISPTLPEPSTQEDAQYRSTKDDLLQQIGKVDREIAKRENQLNMLRKRLKDLEETANKPLEVKDTEEQSQQPKHQSMAQKVYAENRRKAEEAHRLLERLGPKVELPLYNQPSDTSVYQENRTRHQCMRVRLIARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEETLQDLKNSIKACQMEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNYGVIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSTIGPIDILTTGVTTRLQREQQQKTQENPQNSSATTTSASTTSTTGTSSVSSTTIGTTTVTTTTTTPSSSIASGVNVTADSVTTSTTTTMTSVPNITATSSISTTSTTSSTKDSREASKENKENKVDLKESHLIKVEPKEESQSEPTSGKDIKVIMEGKGALSSSASSLNNATNVSTIQSDFKESSKKKPGCRDTNNSGANVAASGRIKDKKKENHTPMETSDEEAPSIDVIGKFSVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01422169;
- 90% Identity
- iTF_01423599;
- 80% Identity
- -