Acha005448.1
Basic Information
- Insect
- Acromyrmex charruanus
- Gene Symbol
- JARID2
- Assembly
- GCA_017607545.1
- Location
- JAANIC010004024.1:8861690-8870598[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9 4.4e+03 -2.8 0.2 57 82 151 178 133 180 0.58 2 3 1.4 2.1e+03 -1.8 0.0 38 65 1100 1126 1093 1137 0.81 3 3 2.3e-19 3.5e-16 58.4 0.2 23 89 1372 1436 1338 1436 0.83
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGCaacgataaaagaaaaaggaaggaGGGAGATCTGGTAGACCTCGTGGAACCACTTTCGGAATCTCCGAAAAGGACCAAAGTTCATGCACAAAGAAAATTTGCGCAAGGTGCGATCACTGTGTTTAACACATCACCTACACCTATTAAGGACAAAGAGAAAGCTAAACCTGCTACAATCACAGAATTAATAACTCACAAACGACCAAATACGGAggattttttaacatttttatgctTCAGAGgAACATCTATTTTGCCacctaatttaaattttttcaatactggcaacaaaaaagagaaacaagGATCTAAGCCAACTCAAACTTTTATAGAGAAGACATTGTCCTCTACTAGTACTTTCATAGAAATTCAAAAGCATGAAAATACAtgccaaaaaaatttgacaaaagtAAAGCCTATTGtctcgaataaaaaaaaagtgactaGTGCGTTGCACAAAAGTATTACCAAACTTAAGACGACTACATCTACGGTTCAAGcacttaaaaagaaatatcaggAACAACGCCTTGCTAAGCAaagaatcaaaaataaatttaaagctaCTTGCGTTATGAAGACAAGATCATGTACAGAGAGATCTATGTTGAAGGCTGGTCTTAAGTTGGCACCGCGAAAATTTTTACCTAAAATCAAGACAAAGAGGCATGGCCTAAGAAGTAGTGTACTACCAGAGAAAACCAATAAACCTCTATCAAAAGCAAAAGTTACGTTACCCAAACCAAAGAAGAAAGTcaatttaaaatcgaaaaatagtGATACTTCGAATATAGATGCGTCATCTGAAGAAGACAATGATGGCGATGACAATCAAGGGGAAGAATTACACATGGAGAAATCAACATCGCAGATAAAGCGAAACATACAAAGAGGCATCCAAAAAAAGATTTGCACTAGAAGTAAGTCAGAGATGAGGAGAGTTACAAGATCGTCCAGTGGCATAGTCTCTTCACAAAATCTTTCCAGAAGGCCTACCAGAAAAACAAAGGAAGCAGCTGCTGTATATATGGAAATTCTTGGGAGAAAACTAGTGAGTCCGGATTTAGAAAATGATGATAACGTTTCATTTGAAAGTTTTCCCGAGCTACCAAATGCTCGTAGAATAACGCAAACGGAGAACGAGCTTAAAGCCAAAGTGAAACAAAATAGTATCAAGACTATTATTAAAACCAAGGATTCTAAAGTTAGTTCTTACAATAGTAACGCTAATAAGCGATTggataaaagcaaaaataataaactgattTTAAAGAGCAAACGTCTGATGAGGGTACAGAAATATTGTGAAGAGGATAGCGACGAATCTGAGAGCTCAATAGAAACAAGCAATTCGAGACCTATTACCAGACAGAGTCTTGGAAAGATTGATAAACCAAGCAGGAGCCTTAGATCATCCTCCAAAAACACAACTATACAAACAACTACACAAAGTAACGTAAATAGCAAACCGAAGACtcaaattcaaaattgtgTGAAATCAGCTAGGGaaaaatttgtgataaaaCGTAAACgcgagaaaaatatatgtaaaacgtCATTGGATAAGATTAAGCAAAAGAGCCTTAAAAGTAATCAAAACGAGAAGGGGGAATCAGAAGAGGAGACGTTAGGAATGCTgctcaataaaataaagaagaaaaaagacaatgaggaggaagaagaagggCAAGTCCCTGACAATATCAACAacctgaaaaataaaaaagcagtTTGCAGTGACATACAAAAAACAGCCGATCTGTCAAAGGTATCAGACGATGAGGAATCTTTTCGAGGGTTTACTAAGAAGGCGATATCAAAAGTTCTGAATTCATGTCAGACGCATGCCAATGTTAATTTGCTAGTCACAGAGTCCGATAAAAAGTTGAATTTACCCAGAACATTGGATGTATCGCAAACAGCGCAAATAGTCGATCAAAGCGCCATTTTACggaaaaataaagtagaaaCATCACCGATCAAAGATGGTTTCTCAGTTGCAAATCCGCTGAACAGTGAATGCGATTTGTCTGTACAGGAAAAATCTGTATTAGATTTGTCCGTCAAGACCCAAAGCTTATTGTTACCATCTGTAGAACAGACGAGCAAAACATGTAATCGCGAAAATGAGGTTTCTTCCTCAAACCTTATGCCACTGTCCACTCTGCACACAAGAAAAGAACGAGTGAATATGTCGACCGAACAGATAGAAAAGTGGTTGAACGAAAGTTCGTTTGCTAAAGAAGAGAGCAAGCTGGAGATGGAAAATGTTTCCAGTTTTAGATACGATTCTACAGAAAAGTTAAAGGCGGATGTCTCGCATTTGTCTATTTCGACGAAAATCCAACATTTGGTACGCCCAGTCAACGTTACACTTTCGAAATTATCGGATAAGACGAATTTGAAGGATCGTATAGGGATACACAGCAAAAATGTGATACCGGTAACATCTGATACCGGTAATACTGGAGTGAAGCAACAAAATGCGACaaatattgacaaaaataagAGCACTATCGAAACGAAAGAGATTGTCAAGAATAAAATTGGGAAAACGAACAAAGATACTTCTTTTGCTGAAGATATTAGCGATACTGTGTCTAAAACGGATCAAAACTCCGTGGTGGATGATGCTATAGAGAAGAAATCGCCGAcagagaagaaaatatttcaaccgCGGAAACCTTTTTTGCCCAAGGTTAAGGAACGTAAAATTGTAATACCGAATGCAAACGCGTTTTCGCCAGAGAACGAAAGTAGCGTTTACGCATTTGAAAGTGACGCCGAAGTTCCCGTTAGCACACCCTTCCGAAGAAAGATCAGAGATAATGTAAAACATTCGACTGTGGTAGCACTATCACCTGCAGAGACTATAACATCTGAGTCCAAAGTAATGGCTAACAAATCAAGTTTGAAGGATTCTAAACCATTGGATAGCAAGGAAAAATTGTCGAACGATCCCGTAACGACTGTAAAGAAAGAACAAGAGTCGCAAGAACTGAAGAACGTAGCAAATTCAGGTACAGGCGTGAGCAAGTTTGAATTGCCCAACAATTTTGCAAACTTGACCACTGTCCAAGTGCTACCACTCGACAAACTCACGACAAGTTGGAGCAACGTAAATTGCAGTGCTTCCATAGCGGTGCAGGTGAATCTCGACGAGACCACGCAGGAACACGAAAACAATACAAGTCAACAGAAAAGTACTGAGATATCTACTCAAACCGAAATGAGTAACGAGAatgacgacgacaacgatggacatctattttatattccgTTACAGGCTGTTACGAGAGGCGGTCCAAATCTGGTACAAGGTCAACAACTAATACAGGGCGTGGCTGTTAAACTCGGTACGGAAGGACCGACCGGCCCTAATCAAAGAGTCCTCCTTCGAGCTAAGTTGGTCACTAAGCCACCATCATCAGTGGCACGTTGCCCACCGATAGGAACAGTACAACCGACAACGCGTACTCCACCTAATCCTGCAGCAATGACAGTGGAACAGCAAATACCATCAACGTCAACGACTGCAACTGTGTCAACCACGATAGCAAGTATGTCGAACGTGGAGATGCAATCAATGTCATTGATGAAAAACGAAATGCCAGTGCCAAGTCTGATTCGTCAAAATGCTAGTACAATCATAAATAGCAATTCAGCTGAAAAACTCACAAAATCACCTAAGTCTAGGGAAAGAAAAACTTCTATAGATTCGACAAAAAGCGGAAAGAGgACACAAATGAAATGCAAACAAAAGGGATCAGAACTGTGCTCTTCAAGCAGTACGACGTTTCTAGCCGCGAAAATCGCGAATGATGAAGCTCGCGTGGTCGAGGCGCCAACGTTTCATCCGACGGAGAAAGATTTTCAGGATCCATTGGAATACATAGATAAGATAAGGCCAATCGCTGAAAAATTTGGAATATGTAGAGTGGTGCCTCCACCAAATTTCAAGatattaattactaaaaattgccaaatattggtcttgaataattttttattcaaatactatcaactttatagaaaagctgcaagaaacaaaaatcatttatcttcttcgcataaagttctgagaattttttcagaattttttaataccATTGGTGGAATGGAGGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTGGGTGGATTGAAAGAagtaattgagaaaaaaaagtggCAAAAAGTAGCAGATGGTATGAAAATACCGAAATCAGCACAGGATCGTGTTACTAAGCTAGatgatatttattgtaaatatttattgccaTATGATACATTATCCCcagaGGAACGTGGAAAGTTGTTTGACGAAGTTGAAACTGAATGGGTAAGAAAAGAAAGCAAAGCCTTGCAAAGGCAAGAAGTGACATTTAATGATAACGATGAGGAAGAGGATGAAGACAGTTCTGATGAAATTGAAGAATGTATCGTAAAAGGAAGAAACATGCCATTGAACGCTTTTTATCGAATTGCCCGTAATACTCAACGTATGTGGTTCGGTGAAAATCAACGAGGAAATGAAACCGAAGGTGCTTCCGCCAACGAGGTAGAGAGTGCATTTTGGAAACATGTTGCCGAGAGAAAACGTCATGTCTGCGTACATGCAGCAAGCATTGATTCGAGCGGTCGTGGATTTGGATTTTCTGTTGCAAAAAACAGTCCGTTTGCTAGACATCCTTGGAATCTTAAAGTTCTCACTAACAATCCTGGATCAGTATTAAGAGCTTTGGTATTTTTAGGTGTGACCGTACCAACATTGCATGTGGGTATGTTATTTAGTGCTTGTTGTTGGTATCGTGATCCGCATGGTCTACCATGGATAGAGTATCTACATACAGGTGCCAAAAAAATTTGGTATGGAATACCTGATgagcataataataatttccgaAAAGCGCTCTCAAAAATGGTAccacaatattgcaaaaataagacTATATGGTTACCTTCTGATACTGCTATGGTTCCGCCGGAATTATTAGTGAGCAACGATGTACCATTATGTCAGACTGTGCAAGAGCCGggacaatttataatagtatttcCAAAAGCATTCACATCAAGCATATGTACTGGTTATGTTGTATCTGAAAGCGTATATTTCGCACAACCATCTTGGTTAGAAACTGCAGAACAAGTATTTAAGgatATACAAGATAGTTGCGAACCTTCTATCTTTTCATTTGAgagattgttatttaatattattaatgatacgaGATCACACATAGATATATTGAAACAGatATTGCCGAGTGTAATAAAGATttgtgaaaaagaattaaattatcgtaAACAGCTGGAAAGTGTAGGTCTTATCAATAGAGAAAGATTGCCTTTACCAGTTAGTGGAAAAgggaagaaaggaaaaaaagtgaaagatGATGATGGCGACTTCGAATGTGAGACATGTAGAGCTAATTTGTTTGTCTCTTTGGTAAATAATTCGCAAGATGACAGCGTTTATTGTTTGCCGCATGCCTTGCACTTAATTAGTTGTAAGAAGCAGGTTTTGAAACATTGTACTCTCATGTACACGTATGATGAAgATGAATTAGACGAGTTGATTCACAAACTGGAAAACAGAATTGAAGCCAAATCTAAAAAaactaatcaaataaaacaaaataagcaagaaaaa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLVEPLSESPKRTKVHAQRKFAQGAITVFNTSPTPIKDKEKAKPATITELITHKRPNTEDFLTFLCFRGTSILPPNLNFFNTGNKKEKQGSKPTQTFIEKTLSSTSTFIEIQKHENTCQKNLTKVKPIVSNKKKVTSALHKSITKLKTTTSTVQALKKKYQEQRLAKQRIKNKFKATCVMKTRSCTERSMLKAGLKLAPRKFLPKIKTKRHGLRSSVLPEKTNKPLSKAKVTLPKPKKKVNLKSKNSDTSNIDASSEEDNDGDDNQGEELHMEKSTSQIKRNIQRGIQKKICTRSKSEMRRVTRSSSGIVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSFESFPELPNARRITQTENELKAKVKQNSIKTIIKTKDSKVSSYNSNANKRLDKSKNNKLILKSKRLMRVQKYCEEDSDESESSIETSNSRPITRQSLGKIDKPSRSLRSSSKNTTIQTTTQSNVNSKPKTQIQNCVKSAREKFVIKRKREKNICKTSLDKIKQKSLKSNQNEKGESEEETLGMLLNKIKKKKDNEEEEEGQVPDNINNLKNKKAVCSDIQKTADLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESDKKLNLPRTLDVSQTAQIVDQSAILRKNKVETSPIKDGFSVANPLNSECDLSVQEKSVLDLSVKTQSLLLPSVEQTSKTCNRENEVSSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSFAKEESKLEMENVSSFRYDSTEKLKADVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRIGIHSKNVIPVTSDTGNTGVKQQNATNIDKNKSTIETKEIVKNKIGKTNKDTSFAEDISDTVSKTDQNSVVDDAIEKKSPTEKKIFQPRKPFLPKVKERKIVIPNANAFSPENESSVYAFESDAEVPVSTPFRRKIRDNVKHSTVVALSPAETITSESKVMANKSSLKDSKPLDSKEKLSNDPVTTVKKEQESQELKNVANSGTGVSKFELPNNFANLTTVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEHENNTSQQKSTEISTQTEMSNENDDDNDGHLFYIPLQAVTRGGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPSSVARCPPIGTVQPTTRTPPNPAAMTVEQQIPSTSTTATVSTTIASMSNVEMQSMSLMKNEMPVPSLIRQNASTIINSNSAEKLTKSPKSRERKTSIDSTKSGKRTQMKCKQKGSELCSSSSTTFLAAKIANDEARVVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKILITKNCQILVLNNFLFKYYQLYRKAARNKNHLSSSHKVLRIFSEFFNTIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVETEWVRKESKALQRQEVTFNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNETEGASANEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNPGSVLRALVFLGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFRKALSKMVPQYCKNKTIWLPSDTAMVPPELLVSNDVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPSVIKICEKELNYRKQLESVGLINRERLPLPVSGKGKKGKKVKDDDGDFECETCRANLFVSLVNNSQDDSVYCLPHALHLISCKKQVLKHCTLMYTYDEDELDELIHKLENRIEAKSKKTNQIKQNKQEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423428;
- 90% Identity
- iTF_00015841;
- 80% Identity
- -