Acha006437.1
Basic Information
- Insect
- Acromyrmex charruanus
- Gene Symbol
- ARID5B
- Assembly
- GCA_017607545.1
- Location
- JAANIC010004725.1:1238973-1248877[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-23 1.9e-20 72.1 0.0 1 89 174 260 174 260 0.95 2 2 1.1 1.6e+03 -1.4 0.1 6 33 619 647 616 649 0.86
Sequence Information
- Coding Sequence
- ATGCCGCAGCCGCAGGTGCTGACGGATCCGGGGATCGATTTCTCGGACGTCGAGAAACAGCAGAAGGAATACGAAAGCAATCTGAACTCTTTGAAAAGACCGGACAGCTTCCAAACGAAGGTGGTAGTACTCTCATATCCTAGATATTGCCGCTACAGGGCACTTCTACGTAGACTCGAAGGTGCCGAGCCTTCCTGGCTGTGCTCGTCCATCGCGGCCGCGTTAGGAGGCTTCACCGCGACGCCAGGCACCAAGGTGCTCTTCTGCAGAGACACATTTGACTATCCGGATCTCGAGACTCATGAACTGCTGTGTAATCACTTGGCGCCGAAATTAAAAGGTAGACCACGAAGAAAGCGTAAAAAGCGCAGCGCTTCGCCAGGCGAATCCTCGAACGAGAGCGAAGCCTCAGTGGCGTCGACGTCGAAGAGTACGTCGGCGATCACTAGCCTGGTGATACCCACGGTCGGAAGGCCGCCCTCGTCCGGGATACGGCGGAGCGAGAGGAAAACTAGCGCGGAAGAAAAGAAGTTCATCACTGACGTGCAGAGTTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTCCTGTTCTATACAAAAGTGCAAATGCTTGGTGGTTATGACTCTGTTAGTGCTGGGCGCCTTTGGAAGACTATATACGATGACATCGGTGGTAACACGGGTTCTACTAGCGCAGCAACTATTACACGTAGACACTACGaaagATTGTTGTTACCTTACGAAAGGTATCAGCGAGGCGAAGAAACAAAAGTGAGACTGAATCTCGGACGACGTACCAAGAGTATGAGTGCATCCGAAGATTTAGACATCAAGGAGGAATCGAGCGAGTTCTATATGTCGGAAACACCTCCACCAATAGATGTAATTCCTGCGACCACAACACCACCCTTACAACCAATAATGTCAGCAACAACAACGACTTTACTCTTGAGTGAGAAACCCAAAGCTGAAACTGGCAAGACATCCTCGTTACGTAGCGTGCGAGTGAAGCCGGAACGTCTGAAATCTTTGAATACAATAATCGCCAATAATGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATACATCTATCTCGACGCCCAATAGCACACCCTCCACAACACCGACGAATGGTACCAGTAACAATCAGAGTGTCTTGGAGAGGCAGCTCAACAGTCCTTTGATATCCCAACAAGTTCCACCATCGTGTTCGCCACCAGGCTTGCCTGTGACTAGTGTAGCGGCAAACGCGTCGACGGTCGTCACTCTAACGCCTCCACCTGAGAAGGATATGAAGGAGATCAAGTTGGATCCCAAGCAAACAACTTTACTGGCACAAGGCAAGGAAAATATACCACTATTCGGCGGCGAGAAATTCGCGGAAAAGACGATAATGCCACCAGTCTCCAGATCACCTGAAGTGATCGACCTTGAAAACGAGAACGACACGAGTCGAGACAAAATAATCATTCCCAGCTTTAAGAAACGTAAACTCGAGATTTTGCGTGAAGGCGGTCTCGAAGTTACCGCCGTCGATCTGGATGTGCGACCGAGCGTAATTCAAAGCTGTGTTGGTATGTCGCCGCAACAGCATCAACAGCAGCAATCGCCATCATCCTTGCCTGCTACAATGAAGTCTACTGAAGAGAAGCAACCGTCGATCTCGCCGTATCCACTTCCAGTTACGCCCAACTCCATTCCTAAATTGATATCCGTCACTGTGACACCCGATATAGGACATATGTTACCGTCGCCGCATGAGCATCAAAATCATCCGCCGCGAATACCAACGATTAAACAATTATCAGTTCATcacaacaataacaatattagCATGatgaataacaataatatgataaacaGTCGAATAATAAATCTTGGTAACTCGAACAATACCGCGCTATTGCAACTGTATGCGAATGCGAACGTCGTACCATCAACTATTTCGTCCGTGCAACAATCAAGCCATCGTTTCGTTCCACCAAATATTCCAAATGGCAGGTTATTACTACCAAAGGTGACAcaatcaaggtcgatatttGTGCACAATGAAAGGACGGTTTATGGAAATCCCAAGGATATTTTGAACTCTCCTCCAAAATATCACTCGCCGCATCCGCAtcaacaacagcagcaacagcgcTCGCAGCAACATCCACAAATGAGCTCCAGCAACGACATCGGACAAGGTGTTCTCGATCTGACGCAAAAGAACGAGAAACCGACGTTCCCTAGGCCCAGTCTAGAAATAGTCAGAGTACCTGTAGTGCAGAGGCCTAATCCATTAAATCTGGACGTGCGGAATTCACCCGTGGCTAAGGATAAATTGTCGGACAGACCTGTCGTCGATTGTCCAAAGCGAATACCCTTCCCTGCCTACCAAAATGTAATTGACAGTCGAACTATCGCGTCGAATAACCTCGAGATTACGCTAGTGAATCCCAAGCACAAAAACAATCATCACGTCATACCGTCTCACGTTCAAATACCGAGTCCACCTAATAAAAATGCGATAGGAACGATAAATAGCGTGCAAATGAGGCAGCAGCAATCGCAGCAACAAGTGAACGGAAAGTATACGGTGAGAAATGAGCCGATTTCGCCGTATACACCAAGGAAGCCAAGTCATCCCATCATACCAAACGTACCCAATTTGAATCATTTGAATCATAGTGGAAGTTCATTTCCTAGAATTCAGGCAACGACATTGCAACCACAACAACAAATGAGCATTGATAGGAGGAAAGCGGCTGCGGAGGCCGGTAGGGATCATCAACATCGTAGGATTAGCGAGGGCGAGAAATCATCTTTGGCAGCGCAACAGCAACAACATCaacatcatcatcatcaccatcatcatcatcaggAATCCAGACAGAATGAGGCTGGGCGGCGACACAGTTTACCCAACATACCATCGGGATTCGTACCGACGGTACCGCAAAATAATTCTGCTCCCTTTCCTTTGCCACAATTGCCAAACGCGTCCGGCAAGTTCCTACCAATTCTGGACCCTATGTACTACTCCACGTTCTATAACGGTTTGTTCCCACCGCCGATTCCGCCCACGGCCACCGCAGCTGCTGCCACCGCGTCGTCGTTTTTACCGCCGGAATTTAACGCATATTACAAGGAATTACTTGCTTCCTCGCAACCAAGACTGACGGGGATGACGGGGCAGCCGCCGCATCAACAGCCGGCCGCTCCAACGTCTAAA
- Protein Sequence
- MPQPQVLTDPGIDFSDVEKQQKEYESNLNSLKRPDSFQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTKVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAITSLVIPTVGRPPSSGIRRSERKTSAEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEETKVRLNLGRRTKSMSASEDLDIKEESSEFYMSETPPPIDVIPATTTPPLQPIMSATTTTLLLSEKPKAETGKTSSLRSVRVKPERLKSLNTIIANNATPSSQQASQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPPGLPVTSVAANASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGGEKFAEKTIMPPVSRSPEVIDLENENDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDVRPSVIQSCVGMSPQQHQQQQSPSSLPATMKSTEEKQPSISPYPLPVTPNSIPKLISVTVTPDIGHMLPSPHEHQNHPPRIPTIKQLSVHHNNNNISMMNNNNMINSRIINLGNSNNTALLQLYANANVVPSTISSVQQSSHRFVPPNIPNGRLLLPKVTQSRSIFVHNERTVYGNPKDILNSPPKYHSPHPHQQQQQQRSQQHPQMSSSNDIGQGVLDLTQKNEKPTFPRPSLEIVRVPVVQRPNPLNLDVRNSPVAKDKLSDRPVVDCPKRIPFPAYQNVIDSRTIASNNLEITLVNPKHKNNHHVIPSHVQIPSPPNKNAIGTINSVQMRQQQSQQQVNGKYTVRNEPISPYTPRKPSHPIIPNVPNLNHLNHSGSSFPRIQATTLQPQQQMSIDRRKAAAEAGRDHQHRRISEGEKSSLAAQQQQHQHHHHHHHHHQESRQNEAGRRHSLPNIPSGFVPTVPQNNSAPFPLPQLPNASGKFLPILDPMYYSTFYNGLFPPPIPPTATAAAATASSFLPPEFNAYYKELLASSQPRLTGMTGQPPHQQPAAPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254583;
- 90% Identity
- iTF_00417350;
- 80% Identity
- -