Acha002265.1
Basic Information
- Insect
- Acromyrmex charruanus
- Gene Symbol
- retn
- Assembly
- GCA_017607545.1
- Location
- JAANIC010002283.1:1420096-1525359[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-25 1.9e-22 78.5 0.0 2 89 257 342 256 342 0.96
Sequence Information
- Coding Sequence
- ATGGACACTGCCGACGAGCAAGATATAGAGAATCCAGGTGGAGGCTCCATGGCCAACGGCGCCAACGGAACCAATGGCACAAATGGAGCCAATGGTCAACATCAGACGCCGGAGGGTTCTTTGTATCAGGAAGAGAAGTCGGAAGATGAATCAGAAATGGATGATGAAACACAAGATGAAGAAGACTTACTCTCACCATCACTTCAAGTCAACCCACAAATGAGTTTGGATGCAGCTGTAGGTGTATCTTCATTAGTACAGTTGAACAATTTAATGACCACGCATAATCCACAGATACTAGCGAAATTGAGATTGGAGcatcCCGAGGCGGATATGTTACAAGGTAGAAATAGTTTAGAGGTTCTACAGGCTGCAATGAACAGTAGTACCTTCAATAGCATATTTCCACCTTTATACTTATCGtcgccgccaccaccgccgccacTACCGCCATCATTACCATCACAACCGTCGCAAAACAATCATTCGCAAATCGCGGGAAGTCTTGGGAATCAAATCGGTGAAAATCAAGCATTGGCTTGCTCCACTACTTCCTCCAGACCTGTTGCCACTTCGCAGTCCAACGCCGAATCCTCGCCACCACGCTGCCGGAATAACGGAGAGTCACAAGGAAATTCCAGGAATAACGGAGAAGCTCGTGAGGGTGAAACTCGTGCGACATCAGTAAATAGTCAACATCCACCTGGAACTAATTGGAGCTTCGAAGAACAATTCAGACAGTTGTATGAGCTGGATGAAACCCCTGAACGGAAGATATTCCTTGACGACCTCTTTACTTTCATGCAGAATAGAGGTACACCCATCAGCCGACTTCCCATCATGGCAAAATCCGTATTGGATCTCTATGAGCTTTACAAGTTAGTAGTATTACGAGGTGGACTGGTCGAGGTAATCAACAAGAAGCTGTGGCAGGAAATTATCAAGGGACTTCGACTACCAGCAAGCATCACCTCTGCCGCGTTTACTTTGCGGACTCAGTATATGAAATATCTGTATCCATATGAAAAAGAGAAGGAGGGACTGTCGACCCAAGAACAACTTCAGACGGCGATCGAGACAAATCGTCGTGAGAGCCGCAGAAACAATTACGCGGCTTACCCTGACAATCAAGTATCGCGAAACCAGCACAACTCGCTGCCGCCAAATCCAATGCCATTGCCGCTCTCGATCGCCCAAATGGCGGTGGCTGCGAATGAATCGCAACATCATGTCGTAAATGGACATCCACACGGTCCGCAACATCATCCGCAGCATCTTCCACCAAATCTGGGTAATCTTCCATCTAATCAGCTTTCAGACTATATGCTGAGGATATTGAGAGACAGAAACACAATGTCCAACAATCCGATGATTCAAGGTAGCACATCGACACCGCCACCAGCAGCAATGGCAgagggatttaaatctggaaTGCATTTATGGAATATGTACAGTCcaggtaataataatatgtatccGGCGGCCCAACCTTTCTCTCCATCATCGTCTCACTCACCATTAGCACCGGCAAATAGTCCTGAACCACAGAGGGAAGCCTTAGATCTTGCAAATTCTGGGAACAgTTCATCGGATGCGGTTTCTTTTCCAACTCCTAGTAGATCCGTCAGTTCACCGGCATTTGGAGGAGAGCTGAAGAGAAATCAAGAGGCTAGCGAACTTCCATCTCCAACGTGCTCCAAAAGAATGTTCTTATCCGATGTGGAAGGAAATAACATGGTGCATTCCTTGCGTATTAGACAAATGGTTAGCACTCGAGaTCCTACAAGACGAAGAGAATTAGAAATTAGTGTAGATATTGATGGTATTTTGTATGAAGGTGTCCTGGCTGTTAAACAGGAAGGCAGTAGTAATGGCAGTACCTCGTCGAGCCCCGATAATGGAAAACGGACACAAAATAACGACTCA
- Protein Sequence
- MDTADEQDIENPGGGSMANGANGTNGTNGANGQHQTPEGSLYQEEKSEDESEMDDETQDEEDLLSPSLQVNPQMSLDAAVGVSSLVQLNNLMTTHNPQILAKLRLEHPEADMLQGRNSLEVLQAAMNSSTFNSIFPPLYLSSPPPPPPLPPSLPSQPSQNNHSQIAGSLGNQIGENQALACSTTSSRPVATSQSNAESSPPRCRNNGESQGNSRNNGEAREGETRATSVNSQHPPGTNWSFEEQFRQLYELDETPERKIFLDDLFTFMQNRGTPISRLPIMAKSVLDLYELYKLVVLRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEKEKEGLSTQEQLQTAIETNRRESRRNNYAAYPDNQVSRNQHNSLPPNPMPLPLSIAQMAVAANESQHHVVNGHPHGPQHHPQHLPPNLGNLPSNQLSDYMLRILRDRNTMSNNPMIQGSTSTPPPAAMAEGFKSGMHLWNMYSPGNNNMYPAAQPFSPSSSHSPLAPANSPEPQREALDLANSGNSSSDAVSFPTPSRSVSSPAFGGELKRNQEASELPSPTCSKRMFLSDVEGNNMVHSLRIRQMVSTRDPTRRRELEISVDIDGILYEGVLAVKQEGSSNGSTSSSPDNGKRTQNNDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00016482;
- 90% Identity
- iTF_00016482;
- 80% Identity
- -