Aorb002117.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- stc
- Assembly
- GCA_947359355.1
- Location
- OX375757.1:30662235-30665697[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1 1.6e+04 -4.1 2.9 6 10 258 262 254 262 0.55 2 12 0.012 1.9e+02 2.1 0.2 4 10 288 294 287 296 0.95 3 12 1.2e-05 0.2 11.6 13.0 3 19 301 317 297 317 0.94 4 12 0.00011 1.9 8.5 9.3 4 19 356 371 347 371 0.90 5 12 1.6e-09 2.7e-05 24.0 15.0 1 19 411 429 411 429 0.98 6 12 1.3e-05 0.21 11.5 16.0 4 18 477 491 470 492 0.88 7 12 0.023 3.7e+02 1.1 12.5 1 11 532 542 532 554 0.89 8 12 2.7e-10 4.4e-06 26.5 12.6 1 18 559 576 559 577 0.97 9 12 1 1.6e+04 -4.8 1.3 6 10 606 610 606 611 0.55 10 12 1 1.6e+04 -7.1 14.1 4 18 614 633 613 634 0.71 11 12 7.3e-09 0.00012 21.9 11.1 1 15 670 684 670 686 0.97 12 12 0.00012 2 8.4 9.8 3 16 703 716 702 721 0.84
Sequence Information
- Coding Sequence
- ATGGCATCTTATGTTCCTTCGAAAAATGAAAATGATTTTGATTGTATCGATATAAAAAGTAATGAAGATTGTAAGGAAGGAAGGAACTGGTGTTTTAGTACTGATCATCCAGAAAGTGCTATAACAAGTAATAATAATAATATTGCAAGTTTGACTACGGGAATTCAAGAAGAAAATATTTACGGTGACACCGTTTGGAGGAACACACGAAAAAGTGAACTTACGTCAAATGAAAATGTGGACATAACCCAATCACTTATTCCACAATTTGATAATTTAGATATGAATTATTTGCAATCTAGTTCACCATACTCATCAGATGAATTTTTCAACTTAACATACAACCATTATTTTCAACCAATGCAAGAAGCCCAAACAAGTTTTAATGAATATCCTTTTAATTATAACAACTTTCCAAATGCATATAACTATTCTTCCCCACCAAGCAATTTTAAACTGGAAACCAAATTTAATGATAATATAAAATATAATACATGGCAAAACAATCCAATAATATCAGAAACAAAACCTCTAGCATTTGAGACAAAGAAAGAAATTCCGACTAAACAAATTATTGATAAGTGTTCACAAAGAGAGAAGTTAATCCGAGAAATTGAAGGACGAAAACTGGAATGTCTTGTTTGCGTTGAATTTATAAAACCATTCCAGGAAATATGGTCATGTTTAAACTGTTTTCACATACTACATTTGCATTGTGCTTTAAAGTGGGCTCTAACATCAAAATCAGATGATGGATGGCGATGTCCAGCATGTCAAAATTTATGTCAAACGGTACCAAATACATATCTTTGTTTTTGTGGTAAAACAAAAAATCCGGAGTATAATCGTAACGATGTTGCCCATACATGTGGTAATGTATGCGGACGAAAAACTATTTGTCACCATCCATGTATATTGCTTTGTCACCCAGGACCATGTCCTTTTTGTAAAATTTTAATTAAACGAAAATGTGGCTGTGGAAAAAGTGAAAAACTAATGCAATGTTACATAAAAGAAGAATTCATTTGTGAATCAATCTGTGGTAAATTGCTCAATTGTGAGTTTCATAAATGTGAAAAGATTTGCCATGCCAGTAAATGCTCAAATTGCACTCAAAAGGTTGATCAAGAATGTCATTGTGGTGGAGCCAAAAGGCAAATTTTATGTACGCGCGATACACATGGAAAAAAAAATTTTTCTTGTGGCAAGATATGCTCTAAAACTTTGAGCTGTGGCAATCATAAATGTAAAGACACTTGTCATCCAGGAGAATGTAAATCATGTAAATTATCGCCTGAATTGATCACAGCATGTGCTTGTGGGAAAAAGGCTAGTACTAGAGCCGAAAGAAAATCCTGCTTAGATCCAATTATATGCTGTATGGAAGTTTGCGGAAAAACTCTTAAATGCGGGCCACCAGCATCCCCTCATCACTGTAAAAGTAAATGCCATTTGGGTAATTGTCCGCCATGCAATCAGGAAACAGCTGTACGCTGCCGTTGTGGGAATATGGATCAACTAATTAAATGCCGTCAACTTGTAACCCGTGCTGATGATGCACGCTGTAAAAAACGTTGTCCTCGTAAACGAAGTTGCGGAAAACATAAATGCAATCAAGAATGCTGTATTGATATTGATCATATTTGTCCATTACCCTGTAAGAAAAATTTAAAATGTGGTAAACATAAATGTGATCAGACTTGTCATAAAGGAAATTGTTTACCATGCTACAGAAGTTCATTTGAAGAATTATATTGTGATTGTGGAGCTAATGTTATATATCCCCCTGTTCCATGTGGCACAAAAAAACCAATTTGTAATAATCCATGCCCACGTCAGCATAGATGTGATCATCCAGCTCAACATACATGCCATTCTGCATCTCAGTGCCCTCCATGTATGATATTGACAACAAAATACTGCTTTGGACATCATGAACAAAGGAAGACAATTCCATGCTCTCAAGAAAGTTTTAGTTGTGGTCTTCCTTGTAATAAAAATCTTAAATGTGGAAAACATAAATGTAATAAACCATGCCATGAAGGGCCTTGTCTAAATGATGAAGAGCATTGTTTCCAGAAGTGTAGAAAACAAAGAATAGATTGTAGGCATATGTGTGGTGCAATGTGCCATGAAGGAAATTGTCCAAGAAAAATTTGTAAAGAAATTGTCGAAACAACTTGCCCATGCTTGCATAGAAAACAAAATCGTCCTTGTTATGAATTAAAAAAAGAAAATGAACGGATTAATTTAGCAAAGCTTGCCACTTCTGTGCAAGAAATGCAGCGCGACAATATAGAAATTAAGGATATTTTCAAACCATTAGAAATGAACACAAAGATACTAGAATGTAATGAAGAATGTAAACTTCTTGAAAGAAATCGTCGTTTGGCATTTGCTTTACAAATTCGAAATCCTGATACATCTTCAAAATTAAATACAAAATATTCAGATTTTATTCGAGGCTGGGCTAAAAAGGATCCAAAATTAGTTACGAGTATTCATGATCAGTTAACGGATCTTGTAAAATTATCTAAGGATAGTAAACAACGTTCAAGAAGCTTTTCATTTCCAATAATGAATAGAGAAAAACGTCAACTTGTTCATGAAATGTGTTCTATGTTTGGAGTTGATCCTGTAAGTTATGATGCTGAACCCAATAGAAATGTGGTTGTAACGGCATATAAGGAGAAATCGTGGCTACCAGCAGTAAGTGTTATTGAAGTTTTAAGACGTGAAAGCGGACAACGTCGTGTTCCAGTGCCTAATAATTTTGCTTGGGGTAAAGCTAAAAAATAA
- Protein Sequence
- MASYVPSKNENDFDCIDIKSNEDCKEGRNWCFSTDHPESAITSNNNNIASLTTGIQEENIYGDTVWRNTRKSELTSNENVDITQSLIPQFDNLDMNYLQSSSPYSSDEFFNLTYNHYFQPMQEAQTSFNEYPFNYNNFPNAYNYSSPPSNFKLETKFNDNIKYNTWQNNPIISETKPLAFETKKEIPTKQIIDKCSQREKLIREIEGRKLECLVCVEFIKPFQEIWSCLNCFHILHLHCALKWALTSKSDDGWRCPACQNLCQTVPNTYLCFCGKTKNPEYNRNDVAHTCGNVCGRKTICHHPCILLCHPGPCPFCKILIKRKCGCGKSEKLMQCYIKEEFICESICGKLLNCEFHKCEKICHASKCSNCTQKVDQECHCGGAKRQILCTRDTHGKKNFSCGKICSKTLSCGNHKCKDTCHPGECKSCKLSPELITACACGKKASTRAERKSCLDPIICCMEVCGKTLKCGPPASPHHCKSKCHLGNCPPCNQETAVRCRCGNMDQLIKCRQLVTRADDARCKKRCPRKRSCGKHKCNQECCIDIDHICPLPCKKNLKCGKHKCDQTCHKGNCLPCYRSSFEELYCDCGANVIYPPVPCGTKKPICNNPCPRQHRCDHPAQHTCHSASQCPPCMILTTKYCFGHHEQRKTIPCSQESFSCGLPCNKNLKCGKHKCNKPCHEGPCLNDEEHCFQKCRKQRIDCRHMCGAMCHEGNCPRKICKEIVETTCPCLHRKQNRPCYELKKENERINLAKLATSVQEMQRDNIEIKDIFKPLEMNTKILECNEECKLLERNRRLAFALQIRNPDTSSKLNTKYSDFIRGWAKKDPKLVTSIHDQLTDLVKLSKDSKQRSRSFSFPIMNREKRQLVHEMCSMFGVDPVSYDAEPNRNVVVTAYKEKSWLPAVSVIEVLRRESGQRRVPVPNNFAWGKAKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -