Aorb014112.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- pnr
- Assembly
- GCA_947359355.1
- Location
- OX375758.1:27241185-27247947[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.78 1.6e+03 -1.3 0.1 22 27 106 111 101 113 0.80 2 2 4.4e-17 9e-14 50.7 4.4 1 35 497 530 497 531 0.98
Sequence Information
- Coding Sequence
- ATGTCTAATGTTCCGCCCAAATTTTATCGAATATGTCGTTTATGTTTATCAGAAGTAAATTTGTGTGATATTGAAAGGCTCTCTATTTTTGATGCGCGCTCAAATTTAAACAGAAACAAAATAAATTCAAGCGAGAATCATAATTGGATCATGCCTCCTAATAGCATAGAAAAAAGTTCATTAAATGAAGGAATTAAAGAAGAAGACTTACGTGAAAGTAAAGGTGTTGCATTTGAAAACACCGAAGAAACGTTAAAATTAATATCTTTTTATCTTTCAATAGAGATCAGCCCAAAGGATGGCTTATCAAGTATTGTTTGTCGAGCATGTAGAATGCAGTTGGATGCATTGTGCAAATTCCGTAAAGTGGCAGCGGAAGCACAACAAGCTTTAAAAAGTTATTATAATTTTACTACTCGGCTTTCTGAAAAATTGGAGGAAAATGTCTCCAAATCTATCGGAGATTTTGAAGATCTATTATCTTCCCAATTTCTTGGCCAAGCACCAGAAGAAATGGCGGCCACTGCTTTAACCGAGCTGTGTAATAATTCTAATTGCTCCGAAATATCAAGTTTATCAGTTATACCTGATAGTTTTCCGTCTCCTGCTTTAACATTTAAATCTGAAAAACAACAGAGTCCAAATTGTGAAAATAATATATATGAGGATTATTTAACAGATGATAATGAACCAGGAGATATAAACCATTTACAACAACGTTTAGAAACGGCTGCCGTTTTAATGAATATAAGTAAAAGAATTATATCTTCAAATACTTCACCATCAACCAATTCTACAAGTCTTCCGATTGTGATAAATTCAAGTATTAATAATTCTGTGATAAAAACTGAAGAAAGCAATGAAGAAATGGATTTATCAAAAAATCAATCTGGCGAAATATGTATTGAATCAAATCAAATAGTATTTTCTGAACCTCGATTACCATTAAATAATTTCGATGCTAGTAAAATCAATAAATCTAAGGATGTTACAATACACCCTCAATCCTTAAAAGCAAATAAATCAAAAAAGGAAAATTTAAAGTATTTAAAAAATGGTATTAAATTTGAAGAGGATTTTGGCCAAGATTCTCCAACCAGTTTGACATCAGATGATCATTTAACAGATCCTGCAACTACTCAACTCTGGCAAGCTTTAGCTCATAACTCTGTTAAAGGAAAAGAAAGTGAAGCGAGTCAAATTTTAAGGTGCATGATGAATTGTCAGGAACTGGGTCTGACGCCAAGTGCTTTTTACTCACAAAATCATAGTACCTCAGATGAACCAATCGCATTATTAAAGAAAGATCTTGAAACTACCACTAAAACATCAATTGAAGCAAATGAAGAAAAAGATGTAATTAGTTCACAAATCAAAAATACAGAATGGTTATCAGTTGGAAATCAAAAATATCATAATTTTTCATCTCATGACAAATTAAAGATAAAAAAATCGCTAGCCCAAGCAACTTCCTCAAAAGATATGTGTTGTACAAATTGTGGTACTTTAACTACAACAATTTGGCGAAGAAATGCGCGTGGAGAAATGGTGTGCAATGCATGTGGCTTGTACTTTAAACTTCATGGTGTTAATAGACCACATTCAATGAGAAGAGATACAATTCATACTAGAAGAAGAAGACCTCGTGTGAATGAAAAGTCCTTAAAAAAAAATAAATAA
- Protein Sequence
- MSNVPPKFYRICRLCLSEVNLCDIERLSIFDARSNLNRNKINSSENHNWIMPPNSIEKSSLNEGIKEEDLRESKGVAFENTEETLKLISFYLSIEISPKDGLSSIVCRACRMQLDALCKFRKVAAEAQQALKSYYNFTTRLSEKLEENVSKSIGDFEDLLSSQFLGQAPEEMAATALTELCNNSNCSEISSLSVIPDSFPSPALTFKSEKQQSPNCENNIYEDYLTDDNEPGDINHLQQRLETAAVLMNISKRIISSNTSPSTNSTSLPIVINSSINNSVIKTEESNEEMDLSKNQSGEICIESNQIVFSEPRLPLNNFDASKINKSKDVTIHPQSLKANKSKKENLKYLKNGIKFEEDFGQDSPTSLTSDDHLTDPATTQLWQALAHNSVKGKESEASQILRCMMNCQELGLTPSAFYSQNHSTSDEPIALLKKDLETTTKTSIEANEEKDVISSQIKNTEWLSVGNQKYHNFSSHDKLKIKKSLAQATSSKDMCCTNCGTLTTTIWRRNARGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPRVNEKSLKKNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -