Aorb013185.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- grn
- Assembly
- GCA_947359355.1
- Location
- OX375758.1:16617366-16642257[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-19 3.4e-16 58.4 4.7 1 35 233 266 233 267 0.98 2 2 5.8e-19 1.2e-15 56.7 6.3 1 35 290 323 290 324 0.97
Sequence Information
- Coding Sequence
- ATGGCAACAAAAATATTTGCAAATAATAACGATTCTGATGTAACGATAACTTCCCGCATGCCATCATCACATAGTACACCTCAAGTTTGCCGACCACATTTTCATGCACCGTTAGCACCTTGGTTGACCAGTGAGCACAAATCATTTGCTCCAGGTAGTCCATGGGGAAGTCCATTTGCCTGCCCACAAGATCCCCAAGAAAAAGTAGCACAAGTACAAAGTCATCAAACAGGGCAGCATTCATTCCCATTCCCTCCAACTCCACCAAAAGACTCAACACCTGACTCAGTACAAACGGGTCCCTCCGATTATCAGGCAGCTGTAAATGCTTTTATGCACCAAGCACAAGCATCAACAAACTCAGTGTCTGATACCAGCTGTGCACTAGATATCAAGCCTACAATACATAATGGAAGTAGCAGTCAGTCTGGACCtaaacaacgagaaggtattagttcaactaatcacaacaatagtagtagtagtagtcataatagtCATTCGAACGCGACCTTAAATGGAAATGGACTTTTTGATACCCACCAAAGTGCCTATGCTACCGGATATGAAAGTAGCTATGCTTATCATCATCATCAGGCGACAGGGATGTTTCCGGGTACAACTCGTCCTGTCATGGGTAGCCCAAGTACAAAGCCACAAAGGACAAAACCTAGAACGAGTGCCGAGGGACGAGAGTGTGTGAATTGTGGTGCTACATCGACACCTCTTTGGCGACGAGATGGTACTGGACATTACCTGTGTAATGCCTGTGGCCTCTACTATAAAATGAATGGACAAAATCGACCACTAATCAAACCTAAACGAAGACTGTCACTCCAAAGCGCTGCCAAACGAGCGGGAACATCATGTGCTAACTGCAAAACCACAACAACAACCCTTTGGCGAAGAAATGCTAGTGGCGAACCAGTGTGTAATGCTTGTGGCCTCTACTATAAACTACATAATGTCAATCGTCCACTTACTATGAAAAAGGAGGGCATTCAAACACGAAATCGAAAGCTCTCATCAAAATCAAAGAAAAAGAAAGGACTAGGAGGTGCGTGTCTTCCAATTGGAAGCCATCTTGGTGTTGGTGTTGGCATGAGTGACCTTATGAAACCATTGGATCCATCTAAAACATTTGGTGGAGGTTTTTCGGCGTCTATGGGGCAGCATGGACATCTTTCCAGTGGACTACATCCAGCTCATGCGCATCATATGCATGGTGGATGGTATACAAGTGGTATGGGGGCACTAAGTGCTTCAAGTGGGCTACAGGGTGGTTTTTCTACAGCAGGTTCATTAGGTGGGGGTGTTGTGCCCCATTCTCAATCGTATCACTTAGGACTTAGTTCAATGGGCTCATGGCGACCTGACTATACATGA
- Protein Sequence
- MATKIFANNNDSDVTITSRMPSSHSTPQVCRPHFHAPLAPWLTSEHKSFAPGSPWGSPFACPQDPQEKVAQVQSHQTGQHSFPFPPTPPKDSTPDSVQTGPSDYQAAVNAFMHQAQASTNSVSDTSCALDIKPTIHNGSSSQSGPKQREGISSTNHNNSSSSSHNSHSNATLNGNGLFDTHQSAYATGYESSYAYHHHQATGMFPGTTRPVMGSPSTKPQRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGACLPIGSHLGVGVGMSDLMKPLDPSKTFGGGFSASMGQHGHLSSGLHPAHAHHMHGGWYTSGMGALSASSGLQGGFSTAGSLGGGVVPHSQSYHLGLSSMGSWRPDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01298062;
- 90% Identity
- -
- 80% Identity
- -