Basic Information

Insect: Acrocera orbiculus
Gene Symbol: Rreb1
Assembly: GCA_947359355.1
Location: OX375757.1:16263270-16269335[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0075 0.59 10.6 0.6 1 21 176 196 176 198 0.95

2 14 0.00024 0.019 15.3 0.2 1 23 208 230 208 230 0.98

3 14 1.7e-05 0.0013 19.0 7.5 1 23 236 258 236 258 0.98

4 14 0.6 47 4.6 7.9 2 21 393 412 393 413 0.94

5 14 1.6 1.3e+02 3.2 0.4 1 21 456 476 456 477 0.84

6 14 0.0063 0.49 10.8 0.1 1 23 606 628 606 628 0.97

7 14 1.6e-05 0.0013 19.0 1.0 1 23 637 659 637 659 0.99

8 14 0.00059 0.046 14.1 2.0 1 23 665 688 665 688 0.97

9 14 0.00067 0.053 13.9 2.1 1 23 1019 1042 1019 1042 0.95

10 14 6.1e-05 0.0048 17.2 0.3 2 23 1353 1374 1352 1374 0.97

11 14 0.1 8 7.0 6.3 1 23 1380 1403 1380 1403 0.97

12 14 0.72 56 4.4 3.9 1 23 1461 1484 1461 1484 0.91

13 14 0.089 7 7.2 0.8 3 23 1533 1553 1532 1553 0.87

14 14 0.0018 0.14 12.6 4.8 1 23 1559 1581 1559 1581 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0075	0.59	10.6	0.6	1	21	176	196	176	198	0.95
2	14	0.00024	0.019	15.3	0.2	1	23	208	230	208	230	0.98
3	14	1.7e-05	0.0013	19.0	7.5	1	23	236	258	236	258	0.98
4	14	0.6	47	4.6	7.9	2	21	393	412	393	413	0.94
5	14	1.6	1.3e+02	3.2	0.4	1	21	456	476	456	477	0.84
6	14	0.0063	0.49	10.8	0.1	1	23	606	628	606	628	0.97
7	14	1.6e-05	0.0013	19.0	1.0	1	23	637	659	637	659	0.99
8	14	0.00059	0.046	14.1	2.0	1	23	665	688	665	688	0.97
9	14	0.00067	0.053	13.9	2.1	1	23	1019	1042	1019	1042	0.95
10	14	6.1e-05	0.0048	17.2	0.3	2	23	1353	1374	1352	1374	0.97
11	14	0.1	8	7.0	6.3	1	23	1380	1403	1380	1403	0.97
12	14	0.72	56	4.4	3.9	1	23	1461	1484	1461	1484	0.91
13	14	0.089	7	7.2	0.8	3	23	1533	1553	1532	1553	0.87
14	14	0.0018	0.14	12.6	4.8	1	23	1559	1581	1559	1581	0.99

Sequence Information

Coding Sequence: ATGCGCGATTATGGACAAATTTTTATCAGTAAAAATTTTGTTGATTTTGATTTAAAATTTGAAAACAAAAAAATGATCAAAATGAGTCAACAAATCCAAAGAGAACAAAAATTAGAAAGAAGAACTTCATCAACATCAGAATCATCATTAGAACCAATGGATTTAGGTAGAACACCTAAAAAAAAACAAAATAATATAAAAAATTTATCAAAAAATTCAAATAATAATGATTCTGAAAATTGTGAAAGTGAATCTGAAGATTATGGTATTAATTTAATTAGAAGAGAAAATTTAAGACAAATTGATAATGATAGAAATTCAACAGTAAATTCAATTAATTTACGAAAAAAATTTCGTTTAAATACTGGAAATAAAATTTTAAATAATAATTTACCAAATTTAAATAAACAAAATGAATTAAATCAATCGATTGGAACTAATAATGAATCTGGATTTATTGATGCTAGTAGTAATCATTTAAGCTCAAGTCCTGAATCAGGATCAAGTGAACGTGATGATATTAAATATATATGTCCAATATGTGAAGTTGTATCAGCAACTCCCCATGAATTTACTAATCATATTAGATGCCATAATTATTCATCAGGAGATACTGAAAATTTTACATGTAGAATTTGCTCAAAGGTTTTGTCATCAGCATCATCTCTGGATCGTCATGTTTTAGTTCATACTGGTGAACGACCTTTTAACTGTAAATATTGTCATTTAACATTTACTACAAATGGAAATATGCATAGACATATGAGAACTCATAAACAACATCAACAACAACGAAATTCAGCAGGAATTGGAAGTGGCGGTAGCGGTAGCAATGGTCCTGGTGCTGGTCTCACCGGTACAGGGGATGGTGAAAGCTATGAAAGTGATGGATTTTCAACTGATTCAagcggtagcagctcaaatataaataataataataataataataataataacaataataataataattataaacgtaaagtcattgaagatgaaaATGGTATTATCAAACGTCGTATGAAAACAATTAACAATAATATTATAAATGAATCAAGTAGTAAAGAACAAACTCAATTTTTAAAAAATGTATGCCCTGTCTGTAATCGTAATGATTTTTTAACAATGAATTCATTAGCAGGACACTTAGATCGTGAACATAATAATTATCCAGCAAAGTGTAATCATTGTGAATTAATATTTAAAAATCATAAAACATTAAATACACATCGTTGCCATTATAAAACTAGTATAACACAAGGTTTTAAAGATATAACATTTATTGATTTTTCTAGTGAAAAATTTCCATTGATAGCAAAATCATTGTGTGAAAAAACAATGCGTACGACAGTAACTAATCAAAAATTTGAATGTCAAAAATGTTTTAGAGCATTCCCATGTGCCAGTTCTGTTGAAATTCATGCCAGAGATTGTGGTGAATTACCACAAGATTATTCAATGCGTAAATGTATAACAAGTGATAGTTCTGATGAAGAAAATCGTCGTGATGAATTTTTTGCTCATTTAGATTTACAAAATAAATCAACAATGGGTTCAACAAGTAGCCTATCATCACCAAGAACATCAGAAAAATCAGATCCAAATAAACAACAAAATAAATATAATCAGAATGAAACTAGAGATTTAGCTGATATTCAATCAATATTAAATGTAACCTCATCATCGAATAGTTTTCTACGTAATTTTGAAAAATGTGTTAATACGCCAAGCAGTGAATATAGTTATAATAAAGATGAAGAAGAAGCTCAAGATGTATTTACATCAGAATTTCGTAAAATGAAATTACGTGGTGAATTTCCATGTAAATTATGTACAGCAGTATTTCCTAATTTAAGAGCATTAAAAGGTCATAATCGAATACATTTAAGTGCAGCTGGTAGTGGTCCATATAAATGTAATATGTGCCCATATAGTATACATGATAAAGCAGCATTAATACGACATATGCGTACTCATAATGGTGATAGACCATATGAATGTGCTGTTTGTAATTATGCATTTACAACTAAAGCAAATTGTGAACGTCATTTAAGAAATCGTCATGCTAAAACAACTAGAGATGAAGTTAAACGTTCAATTATATATCATCCATCAGAAGATTCTAGTTGTGATGATCCAATCAAAAAAATTCATTTATTTTCATCACCAGAATTTGATCAGGAAGATGAAAATCAAATACCAAAAGATCGTTCAACACCAGTATCACATCTTAAAGAAATGCTACAATCAGATAAACCAATGAAAATTCAAGTTAAAAGTATTGATAAATTATGTGAAACATCATCAATAATAAATGATAATATTATTGATAAAAATGAACAATTTGATGATTTTAATGAAATTAATCATCCAATTGATTTAAGTATGGATGTATTGGATTTAAGTAAAAAACCAAAAAAAATTGATGATAATAAAACTAATGAAAAATTAATAATTGAACAACAATCAAAATTAGATTTAATTGAATTAGAAAAAAATCAAAATATCTTAATTGCTCAGCAACAATTTTTAAATGATACTTTACCTAAAATGGATCCAACACATTATTTTCAACTATCACAATTATATCGTAATATGATGTTTCCACCATTACATCCATTTTTTTTACAAAATACATTTTTATCTGGGAATTTAAATGATTTTAATAAATTTCCAGCAAATGTTTTAATGAATCCAATATTTCTAAATAATGAACCGCAGATAACAACAAAAATTGaaaatccattacaaaatttagtaaatcaacaacaacaacaacaacaacagccgcagcagttgcagcagcaacaaccacagccaccacaaagtcaattattaactaaatcattatcaacaacaagtccagttaataatatttcgcatataacaccaggagtagcagcagtaacatcaacaAATACGACAATTAAAAATCAAATTAATCAAACAACATTGATACCAACTAATCATAATTCTGGTCCAGTTAAAATGGTAATTAAAAATGGTATTTTAATGCCAAAACAAAAACAACGCCGTTATCGTACCGAAAGGCCATTTGCATGTGAACATTGTTCAGCTAGATTTACACTTAGATCAAATATGGAAAGGCATATTAaacaacagcatccacaatattgggcacaacgacaaagggctggacatcacgttgtacgaagatctggtggtggtaataataataataatacaacaatatcacaaatatcatctaatatagcagcagcaacaacaacaacaacaacaacatcatcagcagcaacagctacagcagcatcaatatcatcaacacaaaatcccacaacagtaaatcattttaatgttatatcagatCAAGTTAAATATGCAATATTAGCACAACAATTAAAAGCCAGAAAGGATACTGATATATTACATCAAGCATTAGCTCAATCTAATAATAATAATTGTAATCGTGATTTAAATGATCAACAAAATAATAATGAAAAAATTAAATCAATTAAAAAAACAACAACAACAACATCCATAACTGGTACTGAAGATGATGATCCAAAATTAATTATTGATGAAGAGGATATTGATGGTGATAATGAAGATGATTTTGATGATATAAAACCGAAAGATTTATCTAAAAATTCAGATAAATCAAATAATATAGTTGCTAAAAAAGTAGCTGATAGTATTTTAGAACAAGCAATACGTGCCAGTAATAAATTAAATAATATTAAAGATAATTTAAAAGCAACTACAAATATGATAGCTACAGCTGAAAATGTTGGTAAATATTTAAAAGAAGTAGCCAGCTCATCATTTAAAGATGAATCAATTGATTTAGTACCAATATCAAAATTAATTGATAATGCTACAAATTCATTAACATTTAATAATTATTTTCGTCCAACTGATGTTGCTAATCAAACTGAACAAAGTGATGAAGAAGGTTTAGTTGCATCTGGTAGTACATCTGAAAGTAATAATTCTGGTACTGAAGATCCTAATTTTAATAATATATGTAATGAACAAAAAAAAAAATCAGCATATAGTTTAGCACCAAATCGTGTATCATGTCCATATTGTCAAAGAATGTTTCCATGGTCAAGTTCATTAAGACGTCATATATTAACACATACTGGACAAAAACCATTCAAATGTTCACATTGTCCATTATTATTTACAACAAAAAGTAATTGTGATCGTCATTTATTACGTAAACATGGTAATATTGAATCAGCCGTATCATTATATGTACCAATTGATGATATAATAGATCCATTACCAAAACCAAAACATTTAGATGATATTAATGATAAAAATAAATTACAACAAAATTTAAATATTATACAAAATATTAAAATTGAACCAATTATAACATCAACTGATTTACCATTTAAATGTCATTTATGTGATAATTCATTTTCAGAACGTATACAATGTTTAGAACATATTAAATTACAGCATATACAAGAATTTACATTATTATTAGCTAAAGGTGCTATTGATGCTGATGCTGATTATAATAATCAAATACAATTAGCTGATGATGATAATGATCGTAATGATTGTCGTGGTAAATATCCAGATTATGCTAATCGTAAAGTTATATGTGCATTTTGTATACGAAGATTTTGGTCAACTGAAGATTTAAGACGTCATATGCGTACACATTCAGGTGAAAGACCATTTCAATGTGATGTCTGTTTAAGAAAATTCACATTAAAACATAGTATGTTAAGGCATATGAAAAAACATAGTAATGGACATCATAATAATCAATTAAATAATATAAATAGTGGTTCAGATATATCAGATGAAGAACAAAATTCATTAAATAcaacaattataacaacgaattcatcaggaacaacaacaacaacaacggcatcaacaacaacatcagaaacaacaaatttaccaattaaaatatcaaatTCATTAAAAACATCAAAATTTAATGAATTTTTAAATCATCATGAACAATGGAAAAATAATAATTGCCATAATTTAAATATAAATGAACAAAATAAATTATTATCATATATTAAATTAGAAAAAAAGCCAAAAACAAATGATGATTCTCTATCATATCAAGCAAATAATTTAATTGGTAATCTTCTTGGTATTAGTGATCAAAGTATATTAAATAAACTTCTATCATCAGCTGATGAAGCAGCTAAATTACTTGGAGTAGAAAAATAA
Protein Sequence: MRDYGQIFISKNFVDFDLKFENKKMIKMSQQIQREQKLERRTSSTSESSLEPMDLGRTPKKKQNNIKNLSKNSNNNDSENCESESEDYGINLIRRENLRQIDNDRNSTVNSINLRKKFRLNTGNKILNNNLPNLNKQNELNQSIGTNNESGFIDASSNHLSSSPESGSSERDDIKYICPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQQRNSAGIGSGGSGSNGPGAGLTGTGDGESYESDGFSTDSSGSSSNINNNNNNNNNNNNNNNYKRKVIEDENGIIKRRMKTINNNIINESSSKEQTQFLKNVCPVCNRNDFLTMNSLAGHLDREHNNYPAKCNHCELIFKNHKTLNTHRCHYKTSITQGFKDITFIDFSSEKFPLIAKSLCEKTMRTTVTNQKFECQKCFRAFPCASSVEIHARDCGELPQDYSMRKCITSDSSDEENRRDEFFAHLDLQNKSTMGSTSSLSSPRTSEKSDPNKQQNKYNQNETRDLADIQSILNVTSSSNSFLRNFEKCVNTPSSEYSYNKDEEEAQDVFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGSGPYKCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRSIIYHPSEDSSCDDPIKKIHLFSSPEFDQEDENQIPKDRSTPVSHLKEMLQSDKPMKIQVKSIDKLCETSSIINDNIIDKNEQFDDFNEINHPIDLSMDVLDLSKKPKKIDDNKTNEKLIIEQQSKLDLIELEKNQNILIAQQQFLNDTLPKMDPTHYFQLSQLYRNMMFPPLHPFFLQNTFLSGNLNDFNKFPANVLMNPIFLNNEPQITTKIENPLQNLVNQQQQQQQQPQQLQQQQPQPPQSQLLTKSLSTTSPVNNISHITPGVAAVTSTNTTIKNQINQTTLIPTNHNSGPVKMVIKNGILMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRAGHHVVRRSGGGNNNNNTTISQISSNIAAATTTTTTTSSAATATAASISSTQNPTTVNHFNVISDQVKYAILAQQLKARKDTDILHQALAQSNNNNCNRDLNDQQNNNEKIKSIKKTTTTTSITGTEDDDPKLIIDEEDIDGDNEDDFDDIKPKDLSKNSDKSNNIVAKKVADSILEQAIRASNKLNNIKDNLKATTNMIATAENVGKYLKEVASSSFKDESIDLVPISKLIDNATNSLTFNNYFRPTDVANQTEQSDEEGLVASGSTSESNNSGTEDPNFNNICNEQKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNIESAVSLYVPIDDIIDPLPKPKHLDDINDKNKLQQNLNIIQNIKIEPIITSTDLPFKCHLCDNSFSERIQCLEHIKLQHIQEFTLLLAKGAIDADADYNNQIQLADDDNDRNDCRGKYPDYANRKVICAFCIRRFWSTEDLRRHMRTHSGERPFQCDVCLRKFTLKHSMLRHMKKHSNGHHNNQLNNINSGSDISDEEQNSLNTTIITTNSSGTTTTTTASTTTSETTNLPIKISNSLKTSKFNEFLNHHEQWKNNNCHNLNINEQNKLLSYIKLEKKPKTNDDSLSYQANNLIGNLLGISDQSILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -