Aorb000144.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- hang
- Assembly
- GCA_947359355.1
- Location
- OX375757.1:2812301-2819703[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.005 0.39 11.1 2.1 2 23 231 253 230 253 0.95 2 21 3.2 2.5e+02 2.3 2.2 2 21 346 365 346 366 0.92 3 21 0.014 1.1 9.7 1.7 1 23 406 429 406 429 0.91 4 21 1.6 1.2e+02 3.3 2.3 2 23 468 490 467 490 0.87 5 21 0.00021 0.017 15.5 0.2 2 23 523 545 522 545 0.93 6 21 1.9e-06 0.00015 21.9 0.8 1 23 553 576 553 576 0.97 7 21 0.44 34 5.0 0.6 2 23 589 611 588 611 0.90 8 21 2.8 2.2e+02 2.5 4.7 1 23 614 636 614 636 0.96 9 21 0.00016 0.013 15.8 0.8 2 23 685 706 684 706 0.97 10 21 1.7e-05 0.0013 18.9 2.1 2 23 744 766 743 766 0.95 11 21 0.00046 0.036 14.4 1.8 2 23 775 797 774 797 0.95 12 21 0.00021 0.016 15.5 0.6 1 23 811 834 811 834 0.96 13 21 0.00085 0.067 13.6 1.0 1 23 854 876 854 876 0.99 14 21 0.0096 0.75 10.3 0.6 2 23 885 907 884 907 0.94 15 21 6e-05 0.0047 17.2 0.5 2 23 915 936 914 936 0.98 16 21 3.8e-05 0.003 17.8 0.5 2 23 993 1014 992 1014 0.97 17 21 1e-05 0.00081 19.6 0.1 1 23 1049 1071 1049 1071 0.97 18 21 6.4e-05 0.005 17.1 0.4 3 23 1105 1126 1103 1126 0.93 19 21 0.01 0.82 10.1 0.4 2 23 1146 1167 1145 1167 0.94 20 21 0.00029 0.023 15.0 0.3 2 23 1180 1201 1179 1201 0.96 21 21 0.00021 0.017 15.5 0.8 1 23 1350 1372 1350 1372 0.98
Sequence Information
- Coding Sequence
- ATGACAGATGATCTGGTAAATCGGGCTCGAAAGAATTGCTGCCGACTTTGTTTAGCTCCTGATAATGAATGTGTTCCAATTTTTACAAGTTTGGCTGCTGATAAGGAACCCATTTCGCTTAAAATTCTTGCATGTGTCAGCATCAAGATTTTTCAAGCTGATACACTTTCCTCAAAAATTTGTCATGCATGTATTAGCTATTTAAATTCATGGCAAAGTTTTAAAAATCGATGTTTTGCTGCTCAATTAAAGCAAAGAAATTGGTTAGATCAGGCGAAAAATACATTTAGAAAACAATTTGATCAGATGCATCAAGTACAGAACAGTAATGTAACAATTCATCAAGATAAAATGCCTTTACCTTTTATAATTAAGCAAGAACCATTAGATGAAACTGATATAAAAGAGGAAGATGACGATGATTATGAAGATGATTCGAATGGTTTTTATAATGATAATGAAGGAGATTATGGTGACAATGAAACAACATCACAATTTTTGGCACGACCTCAAAATGCTCAAAATGAAGGTCCACAAATATTAACTTCACTGGGTCTTACACATATCAACAGTGTTAATCCGTTTTCCTTTTTGAGTACCGAGCTTGGGAATGAAACAGCGACAACAAGTAATGAAAATCCTTCAAAAAAACCTAAACTTTCACAAGAAAGATTATCTTATCTCTCAACTGTTTGTTCAGTTTGTAAAGTAACATTTTCATCTCATGCAAATCGTAAAAGACATGAACGTAATATTCATGGAAAAGGACTTGATCCAAATGCTTCATCAGTTGGTTATAAACTTCCAAAACCAAAACCGATATTAACTCCCGAAATGAGGGGAATTTATGATTATACTAAACCTGAAAAGTATCGGTATATGTTAACTGATCAAAAAATATTCTTTATTAGAAAAAATGAGAATTTTTTGAAACAATTTCAGGATTTTAAATGTAACTGTTGTTCAAAAACTCATGATTCATACAAACAATTTATGGCTCATATGCGTAAAAGAAATCCTTCAATAGCTAAAAATGTTTGTTTCAAATGTTTAAAACATTTTCAATCTCGAGCATTTTTTGTTTCACATTTAAAAAAGAGAAACTGTATTGATTTATATAAATTATATTTATTGGATGATGCTATATCAAAAACGGCTCCATTATCAATAACACCTGATAAAATGGGAGCAAAAGAATTATTAACTAATAAAGTTTATGAGTGTAAATTATGTTCACAAACTTTTAGATTAAAAATGGAATTTCGTAGTCATGTTTATGAACAACATGTTGATAATTTAAAACGTGAAATTGTGCCAGGAACATGTTGTTTTTGTCAAATTAAAATTGAAGATCCTACAACTCGTAAAAATCATAGTAATTTAGAATGTATTGTTGTTTTACATTGTGGAACTTGTAAGGAAAAGTTTGATAATCATCAAAAATTTATTGAACATGTTTATGGAGTTCATTTACCACAGCCAACTATAAATAATAATGAGGAAAATAATAAACTAATAAAGCGAGAACGTAGTGGACAAAGTAAAATAAATGAAAATTGTCCACTTACCTGTAATATTTGTGGTTTATCATATAATAATTATTATAATGTTCTTCGACATATGGAAGCTAAACATCCTGGTCAATTGCCAAATACATATACTTGTCCACATTGTGATGCTGGATTTCCTCGACAGTCATCACTTCGTGATCATATGTATAAGGAACATGGACGTACCGTACCTAGGGCTAAACGTGATCAAATTCAATGTAAACAATGTACAACAATATTTGATACAATTGAAAAATGGTTACAACATCAGACTGATAAACATTCAAACTATAGTTGTTGTCATTGTAATTATCAAAGCCTTCAATTGTCTGAATTTGAAAAACATATTACTATACATACATTTTATTCAAAAAGTAATATATCAGAGGCAACTAAACGTTCTTTTAGTAATGGTATTGAAGATTGTACAGGAACTGATGATGATAAAAGTTTATTAGTACCAATGCCTCCGAAAAAAATTAAATTAGAGCAGCCTGTTAAAGAATGTCAGATATGTCATGCAGTATTTAATAGTAGCCAAGGACTATCAAATCATATGCGAGCTCATATTGCACAACAGCAAATAAAACGTTCTTTAGAGAAACAATCTAATACAAGTACACCTAATGGTGAGATTAGAATGTTTGAAACACAAGATAAGGATGTTTTACGTCGATTAAGGTGTAGAATATGTCAAAAAAGATTTACAACAAAAAAAGGTTATAAACGACATATGCTTATAGAGCATCAAATTAAAGATGTTAGTTTTATTAAATGTACTCAATGTAATGCAGAATTTACACATTCAAAAGGCCTTAAAGTTCATATGTTTAGAATCCATGGTACAGTTGCAACAGATGATGATGTTTCTGATATTCAATATGAATGTCATGTCTGTTCTACAGTTTATCGTGATGAAGAACAATTAAATGCTCATAAAAGTTCAGTCCATGGTATACCAATAAATGATCCATCAACATCTCAAGATTCTAATGATCCAACTTATTGGTATCAGTGTCGTTATTGTACTGCAAATTTTGATTCAAATAAAAAACTTGCTATTCATTTAAATTCACATCCTGAAATTGATTCAACAGATACATCTTGTCAGGACTGTGGTAATGTATATAGTGGTAGAAAAAGTTTATGGGTACATAGATATAAAAAACATCCATTAATTGCTAATCCTGGTAAATGTGAACTATGTGACAAAGTATTTTTCGATAAGAAAATGCTAGTACTTCATTTAAGAAATCATACATCCGATGATGTATATGAACAGATTAAGAAATTAGAAGAATTCATAACACCCACAAATGTTAATGGTGAAAATGAAACTCATACAATTATGCCGGATATACAAATTGATGATGATGAAAATCCAGATGATATAGAAATTATTGATGAATATCAACCAAATTATGTACCTTGTACATTTTGTTCTGAAAAATTCACTGATCAAGAAGAATTTACAAATCATATGAAAATTCATGAGCTTGAATTATACAATGATAATCCTTTAGCTGCAATGTTGGATATTGTTCCAGATAATCCAAGTCAATTCTATATAAATCGTTTAGATGAAAATGGTGAATATATTTGTGATATATGCCCAAAATCATTTACAACGATAGCAGCATTAAAAGTTCATCGAAATTGGCATTTCCGTAATGAAAGTAAACAGAGCCCAATGGATCAAAAAAATTTTAAAGTTGGAAATAGTTCAAATAAAAAGAATCGTTCATCAAATAGTAATATTATATGTAAGTACTGTTCATCGAAATTTGCTAATCCTGGTAATTTAAAACGCCATATGTCTGAACAGCATCGAACTGAAATGGGAACTAGAATTGAAAGTCCCAATATATTTATTGAAAAATATTTAGAATGTCAAAAATGTTCTAAAAAATTTGAAACTAATGCTGAATGGGTTGAACATAAAATTAATCATATAAAATCAACTAAACCAGATTTAACAGTTGATTGGTGTTGTGAAATTTGTGGTAAAATAATATCACGAAAAGATCGTCTTATACAACATATGGCTGTACATTTTAAAAATGATGATATTTTATATAGAGGACCTGTTACAGGAGATCAATGTAATAGTGAAACAGGCTTTGAAACTAATTCTCAAGATTCTATTACTTCGAGTAATACTGGGCATCAAAGTACTGAAATTTTTGCATCGGTTAGTAATAATCTAAATAAAACATCTGAATTACAGGGAAAAGAAGAAATTTTAATAACTGAACCGGCTATTGTAATTAATGAAGATTTAACTGAAAGTGAAGATGATAGAGTTGAAAATTTAGATGATGATGATATTGAAATTATTGAAGAAAAAAAAGATCTAAAAAAACATGTTGATTTAACTAATGATACAGAATTTGATTTAGAAGAAAATTTTGATGATGAAGAAGAAACTAATGATAATGAAATACAATTTGATGAATATTCTTCTAATAGTGAAAATAATGAAAATAATCTAGGTGAATATTCATGTGATTTATGTCAAGTTTATTTTGATACATCTAAGCAATTACGTCGTCATGTTGCTACTCATTTTCTAAATGGTCCTGGATCAGTAACATTAACACAATATCCCAAAGATAAATCGACAACTCTTGCAAATGTACAAAGTGATTATTAA
- Protein Sequence
- MTDDLVNRARKNCCRLCLAPDNECVPIFTSLAADKEPISLKILACVSIKIFQADTLSSKICHACISYLNSWQSFKNRCFAAQLKQRNWLDQAKNTFRKQFDQMHQVQNSNVTIHQDKMPLPFIIKQEPLDETDIKEEDDDDYEDDSNGFYNDNEGDYGDNETTSQFLARPQNAQNEGPQILTSLGLTHINSVNPFSFLSTELGNETATTSNENPSKKPKLSQERLSYLSTVCSVCKVTFSSHANRKRHERNIHGKGLDPNASSVGYKLPKPKPILTPEMRGIYDYTKPEKYRYMLTDQKIFFIRKNENFLKQFQDFKCNCCSKTHDSYKQFMAHMRKRNPSIAKNVCFKCLKHFQSRAFFVSHLKKRNCIDLYKLYLLDDAISKTAPLSITPDKMGAKELLTNKVYECKLCSQTFRLKMEFRSHVYEQHVDNLKREIVPGTCCFCQIKIEDPTTRKNHSNLECIVVLHCGTCKEKFDNHQKFIEHVYGVHLPQPTINNNEENNKLIKRERSGQSKINENCPLTCNICGLSYNNYYNVLRHMEAKHPGQLPNTYTCPHCDAGFPRQSSLRDHMYKEHGRTVPRAKRDQIQCKQCTTIFDTIEKWLQHQTDKHSNYSCCHCNYQSLQLSEFEKHITIHTFYSKSNISEATKRSFSNGIEDCTGTDDDKSLLVPMPPKKIKLEQPVKECQICHAVFNSSQGLSNHMRAHIAQQQIKRSLEKQSNTSTPNGEIRMFETQDKDVLRRLRCRICQKRFTTKKGYKRHMLIEHQIKDVSFIKCTQCNAEFTHSKGLKVHMFRIHGTVATDDDVSDIQYECHVCSTVYRDEEQLNAHKSSVHGIPINDPSTSQDSNDPTYWYQCRYCTANFDSNKKLAIHLNSHPEIDSTDTSCQDCGNVYSGRKSLWVHRYKKHPLIANPGKCELCDKVFFDKKMLVLHLRNHTSDDVYEQIKKLEEFITPTNVNGENETHTIMPDIQIDDDENPDDIEIIDEYQPNYVPCTFCSEKFTDQEEFTNHMKIHELELYNDNPLAAMLDIVPDNPSQFYINRLDENGEYICDICPKSFTTIAALKVHRNWHFRNESKQSPMDQKNFKVGNSSNKKNRSSNSNIICKYCSSKFANPGNLKRHMSEQHRTEMGTRIESPNIFIEKYLECQKCSKKFETNAEWVEHKINHIKSTKPDLTVDWCCEICGKIISRKDRLIQHMAVHFKNDDILYRGPVTGDQCNSETGFETNSQDSITSSNTGHQSTEIFASVSNNLNKTSELQGKEEILITEPAIVINEDLTESEDDRVENLDDDDIEIIEEKKDLKKHVDLTNDTEFDLEENFDDEEETNDNEIQFDEYSSNSENNENNLGEYSCDLCQVYFDTSKQLRRHVATHFLNGPGSVTLTQYPKDKSTTLANVQSDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -