Aorb012812.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- lola
- Assembly
- GCA_947359355.1
- Location
- OX375758.1:11878888-11880818[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-13 5.5e-10 38.7 0.0 4 45 357 398 354 398 0.92 2 2 0.17 2.8e+02 1.2 0.8 4 20 491 506 490 506 0.91
Sequence Information
- Coding Sequence
- ATGGCAACTACAGAAGGACAAACCTACTGTTTAAGATGGAACAATCACAAGGCAAATTTAGTCGAGATCTTAGATGCTCTTATAAAAATGGAAAGTTATGTTGATTGTACAATTGTTGTTGATGATCAAGTACAATTTAAAGCACATCGTGTCGTTTTAGCTGCCAATTCGCCATATTTTCAATCAATATTACAAGATATACCAATGGATCATTGTAGTATACTATTTCCAGGTGTACAAGCTTTTGAAATGCGTGCATTATTAGAATATATGTATACTGGTGAAGTTAATGTAACACAAAGTCAAATTCCAAAAATAATGAAAATTGCTGAACAATTAGAAGTTAAAGGTTTATTTGATATGGCTGATTTTAAAGAAAAATTTCGTAAAATTGATGATAATATAAGTGGTAGATTTACACCACCATCAATATATCAACAAATTAAAGATAATAATGATACACATACAACATCAACAACAATAACAAATAGTGTTACAGCTATTGCACAAAGTAGCTGTACATCACCAACATATAATTATAAATCATCATATTTAAATATATGTTCAAAAAGTCCAGGACCATCAACAGTTAATGAACGTCATACAAATCAATGGCAATTAACAAATCAATTACAATCATCAATACCAACATCAGCTGTTGCCATGTTAAGCTCTGTATATGAATCAGCACCAGATATGAATCCATTAAAAAGAAAAAAAATATCATCAATATCAAATATGTTAATGTCACGTGATACACCAATATTAAGAAATGTTTTAGCACAATCACATAATCAAGAAAGTACACAACCAATGCCATTGGTTTGTCAAAATATTAAACAAGAACGTATTGAAAAACAAAGTCCTGGAAGTTGTAATGGAAATGATTTCAATTCAGATAAAAAAATAAAATTTGAAGATCCACATTCACCATATACTGATAAATCATTTGAAGATGATATTAATGATTGTCCATCAAATTATGGTAATGATTCACGTTTGGCATCATATGTACCACAACAACAACAAAAACCAGAATGGAAACGTTATAAACAATATACTAGAAGTGATATATTATCAGCTATTGAATGTGTTAGAAATGGTATGAGTGCATTACAAGCATCAAGAAAATATGGTGTACCATCACGTACATTATATGATAAAGTTAAAAAACTTGGTATAACAACTGGAAGACCAATGAATCGTACACTTAAACGTAGTCCAAGTAATGGTAGTAGTCAAGCTAATTTTGCATTTAATTTAAGCAGTAATAATCATCATTATGGTTCAAATGAACATCATCAAATAATTGAAAATAATGAACGTAATGATAGAGAACGTAATGAACAACATCATTTACAACAATCAATACCACATCCAGCTGCAGCATTATTAGATCCAACATTTTTACAACAAGCATTTGAAAGTCGTGGTGGTGATATTGCTGGACGTGAAGCATTGCATGCAATGGCATTAGCAGCAGCAGCACATGCAGCTGTTAATGGGATATCAACTAGTCCAGGTACAAATGGTATGGCACGTACCCCATCACCACAAAATGTTATTATGAAATATTCAAGATCACAGAGTCCACATATTAATCATGATATTGATGATGATGAAGATCGTGTTGAAGATTTATCAGTTGGTCGTAAAGAATTAAAATCACCAAATAATCATCAAAAATTAAATATAAATACATCATATCAACAATTACATAATCAACAGACACAACAATCACAACAACAACAGCAGCCTGGTGTTATAGTTCCTCCAATGACAAAAGTTTCACCAAATAATTCAAATGAAGAATATGGTATTGAATTAAAACGTGAAATTATTACTACAGATGATTCTAGAGATTAA
- Protein Sequence
- MATTEGQTYCLRWNNHKANLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDIPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMADFKEKFRKIDDNISGRFTPPSIYQQIKDNNDTHTTSTTITNSVTAIAQSSCTSPTYNYKSSYLNICSKSPGPSTVNERHTNQWQLTNQLQSSIPTSAVAMLSSVYESAPDMNPLKRKKISSISNMLMSRDTPILRNVLAQSHNQESTQPMPLVCQNIKQERIEKQSPGSCNGNDFNSDKKIKFEDPHSPYTDKSFEDDINDCPSNYGNDSRLASYVPQQQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPMNRTLKRSPSNGSSQANFAFNLSSNNHHYGSNEHHQIIENNERNDRERNEQHHLQQSIPHPAAALLDPTFLQQAFESRGGDIAGREALHAMALAAAAHAAVNGISTSPGTNGMARTPSPQNVIMKYSRSQSPHINHDIDDDEDRVEDLSVGRKELKSPNNHQKLNINTSYQQLHNQQTQQSQQQQQPGVIVPPMTKVSPNNSNEEYGIELKREIITTDDSRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00014123;
- 90% Identity
- iTF_00014123;
- 80% Identity
- iTF_00014123;