Aorb003201.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- lolal
- Assembly
- GCA_947359355.1
- Location
- OX375757.1:43290363-43296635[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-18 5.1e-15 54.8 0.0 2 45 434 478 433 478 0.95
Sequence Information
- Coding Sequence
- ATGCCCGATACACTTTTTACAACAAATCCTTGCCAACATCCAATTGTAATATTAAAGGATGTGCAATATAATGATTTAAAAACCATGGTCGACTTTATGTACTACGGTGAAGTAAATGTTTCCCAAGAGCAACTTCCACATATACTTAAAACTGCTGAAATGCTTAAAATCAAAGGATTAGCTGAGATGCCGGATGCAGCAGCATCGCTTACTAAATCTGAAAGTAAGTCATCTTCAGATCAAACAGAACAATTGCCAACAGGTGCAAGTGCACCAGAATCATTATGGGGGGGAAATTCAGACTCACAATTTCAACATCATCATCACCATCAATTCCAACAGCAGCAACAGCAACAACAGCAACAAACACATCATTCAACACAAAGACGAACACCTTCACCAGCAATAGCAACAGCATCACCAGCTAATCGTAGAAAAAGATTGAGAAAATCTTCAAATAATGGATCATCAGAACGTAATTCTGAAGAACAAAATATAATTGAAAGCTCTTCTAATATTAATTTATCACAAATAAATCAAATGTCCTATGGTAATAATGTATCAAATATGCCACAGCATATTCATGGAAAAGTTATAAAAGAAAGTTCAAGTACTGATACAGAAACTCATCCCCAAGATTCATCACAAGAAAGTATAGATGAGTCTTCGAGTCATCATATGCAACAAATTAAACCTGAGGGAGATTTATCTAATGTGCAACAGTCCATGCAATTAGAAATATCTGGAAGTACGCAACATTCACAGTCAGAACATGAAAATTCTACAGTAAGTGGTACGCAAACTCAAACCTCTCATACCGGTGTGCAGTGGACTGTTGTCGACTCAAATTATCCACGTTTTTCATTGTCATGTCAAGCTAATATATCAATCGGAAGTGATAGTCAACAAGGTACAGAAAGCTCAGCATCTACTGGAAATGAACAACAAGCACAGCAACAACAGCAAACACAAATCGTTACTTCCACAGGTAGTTCAATTATATCATCAACTCAACAACAGCAGGGCCATATTCAAATGCATTATCAGGGATCACCGTATGCATCCCAAATAATATCAGTCAATAATTTAGGTAGTAATTATTCTCAAAATATATCAACGCCAACTTCACCAACAGAATCATCAATGGTTCAATCAGTTTATAGTCAAGGACCTACACCAACACAATCACCAGTTCATCATAGTAATAATAGTAATAATTCTACGACTCCAACTACCGGAGAAACAAGTCAAACAACACAATCTCAACCTAAAAGAAAACGTTCTGTTAATCCTCAAAGTGATGAAAATTTTCTACTTGCACTTGAAGCTGTACGAACTGGTGGTATAGGTTTTTGTAAAGCAGCACGATTATATGGTGTTAATAATCGAACATTATGGTTGGAATATAAAAAGCGTGGTTATCCTATAAGTCGTCCTAGTATTAAAAATCGAATTAAATTAGAACCTAATATGTCTCCTCCGCCACCATCGACATCAAATGATGAAACTGGTATTGAAAATTATGAGCATATTAATCAAGCTGGTGTAAATATGCAAGTTCCTCCAACTTCTGAAACACCAACACCCATTATGTGTACACCGCATACACATCCAATGGGTGGTGTTATGGGGTTTTTAGATACAAGGCATATGGAATTTCCTTCGACTATACACACAATGTCAAGACCAAGATATTCAGAGGGATCTGTTAATGTTAATACCACAGCAATGAATTTACAAGGATTAAATTTCAATTCAATGTAA
- Protein Sequence
- MPDTLFTTNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAAASLTKSESKSSSDQTEQLPTGASAPESLWGGNSDSQFQHHHHHQFQQQQQQQQQQTHHSTQRRTPSPAIATASPANRRKRLRKSSNNGSSERNSEEQNIIESSSNINLSQINQMSYGNNVSNMPQHIHGKVIKESSSTDTETHPQDSSQESIDESSSHHMQQIKPEGDLSNVQQSMQLEISGSTQHSQSEHENSTVSGTQTQTSHTGVQWTVVDSNYPRFSLSCQANISIGSDSQQGTESSASTGNEQQAQQQQQTQIVTSTGSSIISSTQQQQGHIQMHYQGSPYASQIISVNNLGSNYSQNISTPTSPTESSMVQSVYSQGPTPTQSPVHHSNNSNNSTTPTTGETSQTTQSQPKRKRSVNPQSDENFLLALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNMSPPPPSTSNDETGIENYEHINQAGVNMQVPPTSETPTPIMCTPHTHPMGGVMGFLDTRHMEFPSTIHTMSRPRYSEGSVNVNTTAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00014181;
- 90% Identity
- iTF_00014181;
- 80% Identity
- iTF_00014181;