Aorb003399.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- bab1
- Assembly
- GCA_947359355.1
- Location
- OX375757.1:46752580-46758300[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-17 2.4e-14 52.7 0.0 1 43 271 314 271 316 0.95 2 2 0.2 3.4e+02 0.9 0.2 2 15 408 421 407 426 0.85
Sequence Information
- Coding Sequence
- ATGGCGACTGGTGATAGTTCAGCAGGAACATCATCCATTGACAGCATGGACCATTTTAAGGTGCGATTACCCGAATTTGTGGAAGAATACACCGATTTTTGGTTCTGGCAGGTGGAATCAGCTTTCGAAGCAGCTGGAGTGTCAGCTGATAGAAAAAAATATAATACCATTATCGGGCAGCTACCGACACGTATAATGTATAAGCTAGCTGATTTTAAATCCCATCCACCTCCTACCGGTAGCATGTATAGTAGTTTGAAGGAACGCATCATCAGCGAATTTTCAGATAACACCCAAACTAGAATAACCAAGCTACTCGGTGATATGTCAATTGGAGATCGTAAGCCATCACAGTTGTTGGCAGAAATGCGTTCAAAAGCAACTAATACGCCAGTTACAGAAGACTTATTAAGGACTTTATGGTTACGAAATTTGCCAGGTCAAATAAGAGCTATCTTATCCACATCTGAGGAGGTTCCACTGACTCAAGTTGCAACCATTGCGGACAGAGTTATGGAAGCCTTACAAATCAATTCACCAAACATCAATGTGGTTCAAGCCTCAAACGTGAATACAGTTCATACCTCGGAAAATCAGCTTGCAGACCCAATCAAAAAATTAGAAGCGCAGATCGAACAAATTTTTCGATACATAAAGAAggatcagcaatcacgttcttggaatgaaccaaataaaaaacgtaACAGTTATCAATACCAGCTACAATCTATGTGGCAAAAATGCTGGAATACAAACCAAAATTTAATGCATCATCTTCGATTTAGAGAAAGGGGGCCACTTAAATCATGGCGTCCTGAAACAATGGCAGAAGCAATATTTAGTGTTTTAAAAGAGGGACTATCACTGTCACAAGCAGCCCGTAAATATGACATTCCTTATCCAACATTCGTTTTATATGCAAACAGAGTACATAATATGCTTGGACCTTCAATTGACGGTGGAACAGATTTAAGGCCAAAGGGACGAGGTAGGCCACAACGTATACTTTTAGGAATATGGCCAGATGAGCACATAAAAGGTGTTATTAAAACTGTAGTCTTTAGAGATGCAAAAGAATTAAAAGAAGAAACTCTTCATATGCCTTATGGCAGACATTCGCCTGTGTTTACATTTCAAGAAGGATCAATGAATTATCCAGGTACAGGTTGTACCAATGGTTTACCCCAACAGGCATCACTTGGTGGTTCAGATTCAATGTCTCCTGAAGCAACAGCGGCCGCTGTAGCAGCTGTAGCACATGGTATACGACAACAAATGCAAATGGCTGCTGCCGGTCATCATCCAGATGCAACAGCAAATATTTTTAACCTACCTGCACACCTACATTCAAATAATGGAGGTATGACCTTACCAAAGCAAAACTCACCAGCATTAGGAGTACAAAATAACTCTAATAGCCAAAGGCATTCATCACCTTCAATTCAGGGACTTCCAAATCCTGCTGCATTAGGTATACCAGGAATATCATCATTACATATGGCAACAGGCTTATCACAAAATCCTAGTCAAAATGTATCAGCAAGCTCTACACAATTTTCCTCAAGTTTATGTAATGCACAATCATCTTTAGCTTCTGGACATTTAGGACTCGATTCATCATCATCATCAGACCCGTCCACAAATCTTAATCGGAATAGTTCACCATCAGATTCAGCACATGATTTACGTATGAATAGTCCCAGTGAAAGCCCTCTAAATTCACCATTAGAAATGGCACTTGAACCTGCTGTTAATCTTGCAGTTGGTGTCAGTGGGATGGCATATAAGCCATCCAGAGGGTATTCTTCACCACGTCCTGAACATTTATTTCAAGAAGATATTGCTGATTTAGTAGGATCACAGTCCCGTAACTGCCAGCAAAATATTAATTTATTTAAAGAGCCATCAGCTATTAAGGTTGAACCAATTTCTGATTGCCGGAGTGAATGA
- Protein Sequence
- MATGDSSAGTSSIDSMDHFKVRLPEFVEEYTDFWFWQVESAFEAAGVSADRKKYNTIIGQLPTRIMYKLADFKSHPPPTGSMYSSLKERIISEFSDNTQTRITKLLGDMSIGDRKPSQLLAEMRSKATNTPVTEDLLRTLWLRNLPGQIRAILSTSEEVPLTQVATIADRVMEALQINSPNINVVQASNVNTVHTSENQLADPIKKLEAQIEQIFRYIKKDQQSRSWNEPNKKRNSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKELKEETLHMPYGRHSPVFTFQEGSMNYPGTGCTNGLPQQASLGGSDSMSPEATAAAVAAVAHGIRQQMQMAAAGHHPDATANIFNLPAHLHSNNGGMTLPKQNSPALGVQNNSNSQRHSSPSIQGLPNPAALGIPGISSLHMATGLSQNPSQNVSASSTQFSSSLCNAQSSLASGHLGLDSSSSSDPSTNLNRNSSPSDSAHDLRMNSPSESPLNSPLEMALEPAVNLAVGVSGMAYKPSRGYSSPRPEHLFQEDIADLVGSQSRNCQQNINLFKEPSAIKVEPISDCRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -