Aorb003673.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- lolal
- Assembly
- GCA_947359355.1
- Location
- OX375757.1:50270857-50272255[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5e-11 8.2e-08 31.7 0.1 3 40 255 292 253 297 0.85 2 3 0.072 1.2e+02 2.4 0.0 28 38 326 336 325 342 0.88 3 3 4.3e-16 7.1e-13 47.9 0.0 4 41 362 398 360 400 0.93
Sequence Information
- Coding Sequence
- ATGAACCACTTGAAATGGATGGGGCACATAGAATCTCTCATGGAGATTCCAAAAAATCTCCATGAAAACACAAGTATCTGCGATGTAAATATCTGCACTACAAGAAAAACATTTCGAGCGCATAAAATAATCCTTTCCGCACATAGTGAATATTTTCGTAAAATATTTAAGGATACGTCGGAAAATGATGTGGATACAATTATGATTCCTGATTGTAAAGATGATATTTTGGAAAGTATCATTAGTTTTTTATACACTGGTGAAGCCTATGTAACATCCTCAAACTTATCCGAATTCCTAGAATCTATCAGTTTTTTGGGAATTCGTAGTGCCATAAGTTTTGAATGCCATTTAAATAAGCTAAAAGAAATCAGAGAATTGGATGTTGTTTGTGACAATAACGTAATTGACGCCACAAATCAGCAGCCCCATGATGATGATGATGAAGGAAGTGTCCGAGAACTTGGTTATTTAGAAGTGTACAATGATGTAGATAAAATGGATTATGCGATTGAAAATATTGAACCTGACAGCAATGAAGAAAATACAGAATACATTTTAAATGAAAACTCCGAAAATACATTTTTATTAGCTGAAAGTAGGGATAAACTAGAAAATAATACAGAAAAAGATTTAGAAAAAGAAGTTTATAAAGATTCTAAAGAAGAAAATAAAGAAATTGAGGAATCACAAGAATACCCAAATTATTCATTGAGCTCAAATGTTGAAATGAAAGGAGAGTCATATCAAATATCAAAAAAAGAAGCATTAGAAAATGCGTCAGAAGAAGTAATTAAATTTGGTATGAGCTTACAAAAGGCCGCTACCAAATATAATATTTCTAAAACGGTTTTATGGCGTAAAGTACGTAAGAATTCTGCATACAAGGTAGAACGTGAACATCCTATGATAGAAGCTGCATTTGAAAAACTAAAAAGTGGAGACTCTCTAAAAAGTATAAGCCAATCTCTTAAAATTCCAATATCAACGTTACATCGACACAAAGTAAGGCTTTTAGAAGAAGGTCGATTGCCAGAACATATTCAAGTGAAACGAAGAGATTCAAAGGAAAATTTAAAACAAAGATTAAATACAGCAATGGAAGCATGTACAAATGGAATGTCACAAAATCAAGCAGCTACCGTCTTTGGAGTGCCAAAATCAACGCTTTGGCGTCATCTACAAAAAAATAATCCAAAAATCATAAAAGGGGAAAAGATTGAGGTTTCTTTGCCCAATAAAATTTACTAG
- Protein Sequence
- MNHLKWMGHIESLMEIPKNLHENTSICDVNICTTRKTFRAHKIILSAHSEYFRKIFKDTSENDVDTIMIPDCKDDILESIISFLYTGEAYVTSSNLSEFLESISFLGIRSAISFECHLNKLKEIRELDVVCDNNVIDATNQQPHDDDDEGSVRELGYLEVYNDVDKMDYAIENIEPDSNEENTEYILNENSENTFLLAESRDKLENNTEKDLEKEVYKDSKEENKEIEESQEYPNYSLSSNVEMKGESYQISKKEALENASEEVIKFGMSLQKAATKYNISKTVLWRKVRKNSAYKVEREHPMIEAAFEKLKSGDSLKSISQSLKIPISTLHRHKVRLLEEGRLPEHIQVKRRDSKENLKQRLNTAMEACTNGMSQNQAATVFGVPKSTLWRHLQKNNPKIIKGEKIEVSLPNKIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00014142;
- 90% Identity
- iTF_00014142;
- 80% Identity
- iTF_00014142;