Aorb005016.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- lolal
- Assembly
- GCA_947359355.1
- Location
- OX375756.1:6977746-6999706[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.5e-11 9.1e-08 31.6 0.0 1 38 551 589 551 594 0.90 2 4 1.2e-13 1.9e-10 40.2 0.1 2 39 606 643 605 646 0.94 3 4 5.4e-18 8.9e-15 54.0 0.0 1 45 660 705 660 705 0.98 4 4 1.7e-18 2.8e-15 55.6 0.1 1 44 712 756 712 756 0.96
Sequence Information
- Coding Sequence
- ATGGCTTCAAGAAATCATCAATATTTTAGTTTACGTTGGAATAACTACCAATGTACTATGACAACAGTTTTTCAACAACTTCGAGAAGATCAGTCTTTTGTTGATGTTACATTATCCTGCGAGAATGACTCACTTAAAGCACATAAGGTTGTTTTATCTGCATGTTCGCCATACTTTCAAAAGCTTTTATTGGATAATCCTTGTAAACATCCAACAATCATTTTACCAGCTGATATTATTTTTAATGATTTAAAAACAATTATTGACTTTGTTTATCGTGGTGAAATTGATGTTTCTGAACCAGAATTACAGGGACTACTTAAAACTGCTGAACAATTGAAAATAAAAGGCTTATGTGAAACACCATATACCGATGAGGCAGTCGATGATAGTTCAATAGCAGCAACAATAACGGTTCCAGATTCAGTAACATCAGCTATATCTAATGTAACCGGTGGTAATCATATAATTAATCATAACACTAGTAATAGTAATTTAATACGAAAAAGTCGTGTAAGAAAACGTTCTAAATCACCTGATTTGAAAACATCATCAATACTATCAACAAATCAACTATATAATACAACAGCATCAATAGTTAGCCAACATCAAACAATATCAACAATTAATACAGTACCAGCAATATGTAATGATGTTAGTATACAAAATTCAACAAATATAGGGCACATAAAAAACGataatcatcagcatcatactcattctcatcaacaacaacatcatcatcatcagacaataccatcatcatcacataatataacaaattcaaatgatggtagtgatgttaagccaccagtaaaaatttgtaaaactgaagaaataagaaataacatcaataataatagtaataataataataatagtaataataacaataataatagtaataataataataataacaataataataataacaataatagtaataataatgggaatgtgccaatttcatcgggtgccacaattgtaacacaaattgtcgtttcACGTGACACCAAAGACAAAAATATGACAAGTCTGGGTATGGGAATGAATGGCGGCCTCTTAGGGGTACCAATGGGTTTCCTTGATTTTGCACCGGAGCCACCAGCTCCCTCTGCGACACCAGTTACAGTCACAGAACAAGTGGATATGTCCTGTGCACCAAGTGCGGATACAAGAGATTTGTCAAATCACACCGAAACGCTTGATATTGACAATCAGATAGCTCAACATTTAATACATCGACTTGATCAATCACCAATGCATCATTTACAACATCAACAAACTGGAGATGATAATAATCCAAATCTAATACAAAATATTAAAAGTGAAGTTATTGAAGTAAAACATCATACACAGGTAGCTAATAATCAAACAAGGCAAGTTGTACAGCATAATAATCATGAAGATATGACAACAACACCTGTTATGGAAATCGATCCGAATAATATTAAGCATGAGCCTGGAATGATAATAACACCAGAGATTGTAACAATGATGACAACAGGGCATATGGAAATGTACCACTCAGATGCCAGTGAAGATTCATTAATGATAGCAAATGGTTCACCGAATGATAATGGTGAACCGCAATATACAAATTTAGATCAACAACATGATATTAAAATGAATGGCCCAAAAACATGGACTCAGGATGATATGAACTCAGCATTAGATGCATTGAAAAATCATAATATGAGTTTAACTAAAGCATCAATAACCTATGGTATACCATCAACAACATTATGGCAGCGTGCACATCGTATGGGAATAGATACACCTAAAAAAGAAGGTACAACAAAATCATGGAATGAGGAATCTTTAAATAATGCATTGGAAGCATTACGTACTGGACAAATATCAGCAAATAAAGCATCTAAGGCATATGGTATACCATCGTCAACATTATATAAAATAGCACGTCGTGAGGGTATAAGATTGGCAGCACCATTTAATGCTGCACCGACAACATGGACCCCTGAAGATTTAGAAAGAGCACTTGAAGCAATACGAGCTGGGCATACATCTGTTCAGAAAGCTAGCACTGAATTTGGAATACCAACTGGTACACTTTATGGGCGATGTAAACGTGAAGGAATTGAATTATCGCGTTCAAATCCAACACCATGGTCTGAAGATGCAATGAATGAGGCTTTAGTTGCTGTTAGAGTTGGTCATATGTCTATAAATCAAGCAGCTATCCATTATAATCTACCATATAGTTCACTTTATGGGCGTTTTAAGCGTGGCAAATATGATGCTAGCGGCATAACAACAACTGTCAGTAATAATCCATCAAATTCAACGGTTAGTCTTGAAATAATCGAGCATAGCCCTGATAATTCGTTACAAAtgtttcagcaatttcaatatagtccgggtccatcgaatgtgcaaactcatcagcaaacacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaccaacaccaacaacaacaacaacaacaacaccaacaacaacaacaacaacagcaaacgttcgagcatcaacaaattcagcaacaacatcatatccaacaacaacaacaacaaacacaagctcaccaacaacatttacatcatacaccacaagatgtggtcacatctagcagtcaaGTTCATAGCCAACAAACTGGGCAATTACCACAAATATATCATCATCACAGTACTGTGGAAAGGAGTTGA
- Protein Sequence
- MASRNHQYFSLRWNNYQCTMTTVFQQLREDQSFVDVTLSCENDSLKAHKVVLSACSPYFQKLLLDNPCKHPTIILPADIIFNDLKTIIDFVYRGEIDVSEPELQGLLKTAEQLKIKGLCETPYTDEAVDDSSIAATITVPDSVTSAISNVTGGNHIINHNTSNSNLIRKSRVRKRSKSPDLKTSSILSTNQLYNTTASIVSQHQTISTINTVPAICNDVSIQNSTNIGHIKNDNHQHHTHSHQQQHHHHQTIPSSSHNITNSNDGSDVKPPVKICKTEEIRNNINNNSNNNNNSNNNNNNSNNNNNNNNNNNNNSNNNGNVPISSGATIVTQIVVSRDTKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEQVDMSCAPSADTRDLSNHTETLDIDNQIAQHLIHRLDQSPMHHLQHQQTGDDNNPNLIQNIKSEVIEVKHHTQVANNQTRQVVQHNNHEDMTTTPVMEIDPNNIKHEPGMIITPEIVTMMTTGHMEMYHSDASEDSLMIANGSPNDNGEPQYTNLDQQHDIKMNGPKTWTQDDMNSALDALKNHNMSLTKASITYGIPSTTLWQRAHRMGIDTPKKEGTTKSWNEESLNNALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYDASGITTTVSNNPSNSTVSLEIIEHSPDNSLQMFQQFQYSPGPSNVQTHQQTQQQQQQQQQQQQQQQHQHQQQQQQQHQQQQQQQQTFEHQQIQQQHHIQQQQQQTQAHQQHLHHTPQDVVTSSSQVHSQQTGQLPQIYHHHSTVERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00014125;
- 90% Identity
- iTF_00014125;
- 80% Identity
- iTF_00014125;