Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947359355.1
Location
OX375758.1:23284995-23286196[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.4e-12 3.2e-09 36.5 6.5 2 38 47 83 47 85 0.93
2 3 0.00014 0.14 12.1 6.1 26 64 85 123 82 124 0.92
3 3 8 7.7e+03 -3.1 0.2 17 24 212 219 210 232 0.65

Sequence Information

Coding Sequence
ATGGGTGGACCAATATTAATAACAGTTCCAAAATATGTCCCAATTACATCAAATCCAATTCCGATTAAAATTGGTATAAATCATAATCTCCATGAAAATTTACGAGGTAAAAAACGTCGTCTGGATCATTTATCATGGGAGGAAAAAGTACAAAGAAAAAAATTAAAAAATCGTGTCGCTGCACAATCATCTCGTGACAAAAAGAAAGCAAAAATGGAAGAAATGGAAAAATCACTTTATGAATTAACAGTAAAAGCAGAACACCTTGAAAGGAAATGTTTACATTTGGAAGCATTAAATGAAACTTTAACCGAAAAAAATCAAAAACTTGGAATCGAATTGGAAATTTTACAAAAAAATTTAGAAGAATATAAAAAACTTGATAAAATCAAAACTGTACCGAATTTGGAATGTGATAACATATCCATAAAATTATCTAGATCTGCAGTGTCTAGCCCTCTGCCGAAGGGAATGGAAAAGATGTTATCTCAAGACAAAGTCAACAACAATCTTATCCTCGAAAATTTCGATTCCAGTAAACTTGAAGAATTCGCTGAAAGCCTCCTCGCTGACATTACAGAAGATATGGAAGCAAGCGATAATGAAGAAGATTTTAAAAGTTTCTTTGCCACAAAAAAATGTAGAAAACAAATGGTGGGGACCACAACAAAACTCATGGAATCCCAACAAGATAAAAGTCAAAGTATAAAAACTGAACCAATATATGATTATGATAATAATAGTACAACATCTGAGTATGATACACTATATGGTACATATAATGAAAAAACAAATAGCATTATATTAACATCAAATACTGAAGATATTGAAATTGAAGAGGCAGTTGAGGAAATAATTGCTGAAGAAGATATTATAACAGATGAAACATCAGATTTAGAAGATTTTGATCCAATTAAAGAATTTTTAATACATAAAGATAATTTAACATCTGAAGCTAAAAGTCCATACTCAATACATTCAGATCATGGTTATGAATCAACAGCGACATCAAAAAGTGAAGGTGAAAACTTGGGATCTGAAGAAATGCTAAATTCTTTAGCTGAACTTTTTCCATCATTAATTTAA
Protein Sequence
MGGPILITVPKYVPITSNPIPIKIGINHNLHENLRGKKRRLDHLSWEEKVQRKKLKNRVAAQSSRDKKKAKMEEMEKSLYELTVKAEHLERKCLHLEALNETLTEKNQKLGIELEILQKNLEEYKKLDKIKTVPNLECDNISIKLSRSAVSSPLPKGMEKMLSQDKVNNNLILENFDSSKLEEFAESLLADITEDMEASDNEEDFKSFFATKKCRKQMVGTTTKLMESQQDKSQSIKTEPIYDYDNNSTTSEYDTLYGTYNEKTNSIILTSNTEDIEIEEAVEEIIAEEDIITDETSDLEDFDPIKEFLIHKDNLTSEAKSPYSIHSDHGYESTATSKSEGENLGSEEMLNSLAELFPSLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-